RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 BAGE2Q86Y30 109 aa13.33□□□□□ -0.28
PHGDH-232ENST00000641947 SFRP2Q96HF1 295 aa13.33□□□□□ -0.28
PHGDH-232ENST00000641947 FMC1Q96HJ9 113 aa13.33□□□□□ -0.28
PHGDH-232ENST00000641947 CITED2Q99967 270 aaPredicted RBP13.33□□□□□ -0.28
PHGDH-232ENST00000641947 TMEM242Q9NWH2 141 aa13.33□□□□□ -0.28
PHGDH-232ENST00000641947 WNK1Q9H4A3 2382 aa13.33□□□□□ -0.28
PHGDH-232ENST00000641947 A0A1W2PS18 150 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 SOCS3O14543 225 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 GCGP01275 180 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 LTAP01374 205 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 MT-ND4LP03901 98 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 PROK1P58294 105 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 FAM24BQ8N5W8 94 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 URGCP-MRPS24S4R325 110 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 IGKV2-40A0A087WW87 121 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-232ENST00000641947 A0A1W2PRX2 142 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 PRAC2D3DTV9 90 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 LINC01619G3V211 115 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 IGKV2D-40P01614 121 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-232ENST00000641947 ADAMTSL5Q6ZMM2 481 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 C1QL4Q86Z23 238 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 TMEM75Q8N9X5 138 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 OR1N2Q8NGR9 330 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 GRAMD2BQ96HH9 432 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 SLC50A1Q9BRV3 221 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 MLST8Q9BVC4 326 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 CTDSP1Q9GZU7 261 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 TMA7Q9Y2S6 64 aaKnown RBP13.32□□□□□ -0.28
PHGDH-232ENST00000641947 RNF114Q9Y508 228 aa13.32□□□□□ -0.28
PHGDH-232ENST00000641947 MGST1P10620 155 aaKnown RBP13.31□□□□□ -0.28
PHGDH-232ENST00000641947 ELOBQ15370 118 aa13.31□□□□□ -0.28
PHGDH-232ENST00000641947 RAX2Q96IS3 184 aa13.31□□□□□ -0.28
PHGDH-232ENST00000641947 C20orf173Q96LM9 149 aa13.31□□□□□ -0.28
PHGDH-232ENST00000641947 RNASE7Q9H1E1 156 aaKnown RBP13.31□□□□□ -0.28
PHGDH-232ENST00000641947 TEP1Q99973 2627 aaKnown RBP13.31□□□□□ -0.28
PHGDH-232ENST00000641947 TENM1Q9UKZ4 2725 aa13.31□□□□□ -0.28
PHGDH-232ENST00000641947 H7BYZ3 331 aa13.3□□□□□ -0.28
PHGDH-232ENST00000641947 KRTAP10-3P60369 221 aa13.3□□□□□ -0.28
PHGDH-232ENST00000641947 PSG3Q16557 428 aa13.3□□□□□ -0.28
PHGDH-232ENST00000641947 LCN12Q6JVE5 192 aa13.3□□□□□ -0.28
PHGDH-232ENST00000641947 PRNTQ86SH4 94 aa13.3□□□□□ -0.28
PHGDH-232ENST00000641947 C15orf54Q8N8G6 183 aa13.3□□□□□ -0.28
PHGDH-232ENST00000641947 ANAPC16Q96DE5 110 aa13.3□□□□□ -0.28
PHGDH-232ENST00000641947 IGKV3-7A0A075B6H7 116 aa13.3□□□□□ -0.28
PHGDH-232ENST00000641947 CXorf65A6NEN9 183 aa13.3□□□□□ -0.28
PHGDH-232ENST00000641947 C2orf70A6NJV1 201 aa13.3□□□□□ -0.28
PHGDH-232ENST00000641947 CXCL1P09341 107 aa13.3□□□□□ -0.28
PHGDH-232ENST00000641947 TRBV6-1A0A0K0K1D8 114 aa13.29□□□□□ -0.28
PHGDH-232ENST00000641947 S100A9P06702 114 aaKnown RBP13.29□□□□□ -0.28
PHGDH-232ENST00000641947 FLI1Q01543 452 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-232ENST00000641947 LINC00322Q6ZN03 302 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-232ENST00000641947 TCF24Q7RTU0 167 aa13.29□□□□□ -0.28
PHGDH-232ENST00000641947 OR10G8Q8NGN5 311 aa13.29□□□□□ -0.28
PHGDH-232ENST00000641947 WFDC12Q8WWY7 111 aa13.29□□□□□ -0.28
PHGDH-232ENST00000641947 DLX4Q92988 240 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-232ENST00000641947 VGLL1Q99990 258 aa13.29□□□□□ -0.28
PHGDH-232ENST00000641947 NRN1Q9NPD7 142 aa13.29□□□□□ -0.28
PHGDH-232ENST00000641947 PSG8Q9UQ74 426 aa13.29□□□□□ -0.28
PHGDH-232ENST00000641947 TGIF2-C20orf24A0A0A6YYL0 155 aa13.28□□□□□ -0.28
PHGDH-232ENST00000641947 PFN1P07737 140 aaKnown RBP13.28□□□□□ -0.28
PHGDH-232ENST00000641947 CBLN1P23435 193 aa13.28□□□□□ -0.28
PHGDH-232ENST00000641947 CSN1S1P47710 185 aa13.28□□□□□ -0.28
PHGDH-232ENST00000641947 MEOX2P50222 304 aa13.28□□□□□ -0.28
PHGDH-232ENST00000641947 FHL3Q13643 280 aa13.28□□□□□ -0.28
PHGDH-232ENST00000641947 ARL6IP6Q8N6S5 226 aa13.28□□□□□ -0.28
PHGDH-232ENST00000641947 C16orf92Q96LL3 132 aa13.28□□□□□ -0.28
PHGDH-232ENST00000641947 MLXQ9UH92 298 aa13.28□□□□□ -0.28
PHGDH-232ENST00000641947 V9GYV3 84 aa13.28□□□□□ -0.28
PHGDH-232ENST00000641947 ADARB2-AS1A8MUL3 147 aa13.27□□□□□ -0.28
PHGDH-232ENST00000641947 FOLR2P14207 255 aa13.27□□□□□ -0.28
PHGDH-232ENST00000641947 ERVFC1-1P60608 527 aa13.27□□□□□ -0.28
PHGDH-232ENST00000641947 RPL11P62913 178 aaKnown RBP13.27□□□□□ -0.28
PHGDH-232ENST00000641947 DPF1Q92782 380 aa13.27□□□□□ -0.28
PHGDH-232ENST00000641947 PRELID1Q9Y255 219 aa13.27□□□□□ -0.28
PHGDH-232ENST00000641947 TSSC4Q9Y5U2 329 aaPredicted RBP13.27□□□□□ -0.28
PHGDH-232ENST00000641947 ERCC8Q13216 396 aa13.27□□□□□ -0.29
PHGDH-232ENST00000641947 PRR27Q6MZM9 219 aa13.27□□□□□ -0.29
PHGDH-232ENST00000641947 Q8TAT8 98 aa13.27□□□□□ -0.29
PHGDH-232ENST00000641947 K7EQM0 130 aa13.26□□□□□ -0.29
PHGDH-232ENST00000641947 DEFB1P60022 68 aa13.26□□□□□ -0.29
PHGDH-232ENST00000641947 TMEM183AQ8IXX5 376 aa13.26□□□□□ -0.29
PHGDH-232ENST00000641947 GBGT1Q8N5D6 347 aa13.26□□□□□ -0.29
PHGDH-232ENST00000641947 DCANP1Q8TF63 244 aa13.26□□□□□ -0.29
PHGDH-232ENST00000641947 SMIM12Q96EX1 92 aa13.26□□□□□ -0.29
PHGDH-232ENST00000641947 ZC2HC1AQ96GY0 325 aa13.26□□□□□ -0.29
PHGDH-232ENST00000641947 C8orf49Q96NF6 230 aa13.26□□□□□ -0.29
PHGDH-232ENST00000641947 OSTCQ9NRP0 149 aa13.26□□□□□ -0.29
PHGDH-232ENST00000641947 JMJD1CQ15652 2540 aa13.26□□□□□ -0.29
PHGDH-232ENST00000641947 SERTM2A0A1B0GWG4 89 aa13.25□□□□□ -0.29
PHGDH-232ENST00000641947 PPP1R2P9O14990 202 aa13.25□□□□□ -0.29
PHGDH-232ENST00000641947 IBA57Q5T440 356 aaKnown RBP13.25□□□□□ -0.29
PHGDH-232ENST00000641947 OR9G4Q8NGQ1 327 aa13.25□□□□□ -0.29
PHGDH-232ENST00000641947 MRPL53Q96EL3 112 aaKnown RBP13.25□□□□□ -0.29
PHGDH-232ENST00000641947 GPR61Q9BZJ8 451 aa13.25□□□□□ -0.29
PHGDH-232ENST00000641947 CCL24O00175 119 aa13.24□□□□□ -0.29
PHGDH-232ENST00000641947 FAM3BP58499 235 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-232ENST00000641947 FAM231DQ6ZW35 169 aa13.24□□□□□ -0.29
PHGDH-232ENST00000641947 NUDT10Q8NFP7 164 aa13.24□□□□□ -0.29
PHGDH-232ENST00000641947 NUDT11Q96G61 164 aa13.24□□□□□ -0.29
PHGDH-232ENST00000641947 MS4A6AQ9H2W1 248 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms