RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 KIR2DL5BA0A0G2JN68 375 aa13.11□□□□□ -0.31
PHGDH-229ENST00000641891 KIR2DL5BA0A0G2JPC4 375 aa13.11□□□□□ -0.31
PHGDH-229ENST00000641891 HAX1O00165 279 aa13.11□□□□□ -0.31
PHGDH-229ENST00000641891 NDUFS8O00217 210 aa13.11□□□□□ -0.31
PHGDH-229ENST00000641891 KIR2DL5AQ8N109 375 aa13.11□□□□□ -0.31
PHGDH-229ENST00000641891 URB1-AS1Q96HZ7 61 aa13.11□□□□□ -0.31
PHGDH-229ENST00000641891 TPPP3Q9BW30 176 aa13.11□□□□□ -0.31
PHGDH-229ENST00000641891 TMSB15BA0A087X1C1 80 aa13.11□□□□□ -0.31
PHGDH-229ENST00000641891 BUB3O43684 328 aa13.11□□□□□ -0.31
PHGDH-229ENST00000641891 GOSR1O95249 250 aa13.11□□□□□ -0.31
PHGDH-229ENST00000641891 RELQ04864 619 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-229ENST00000641891 C19orf54Q5BKX5 351 aa13.11□□□□□ -0.31
PHGDH-229ENST00000641891 NDUFAF3Q9BU61 184 aa13.11□□□□□ -0.31
PHGDH-229ENST00000641891 SH2D1AO60880 128 aa13.1□□□□□ -0.31
PHGDH-229ENST00000641891 CT45A10P0DMU9 189 aa13.1□□□□□ -0.31
PHGDH-229ENST00000641891 RNF182Q8N6D2 247 aa13.1□□□□□ -0.31
PHGDH-229ENST00000641891 MEGF9Q9H1U4 602 aa13.1□□□□□ -0.31
PHGDH-229ENST00000641891 FLNCQ14315 2725 aa13.1□□□□□ -0.31
PHGDH-229ENST00000641891 C3orf79P0CE67 100 aa13.1□□□□□ -0.31
PHGDH-229ENST00000641891 ATP5G2Q06055 141 aa13.1□□□□□ -0.31
PHGDH-229ENST00000641891 LOC102724200A0A096LPH7 203 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-229ENST00000641891 TRBV7-1A0A0A6YYK4 115 aa13.09□□□□□ -0.31
PHGDH-229ENST00000641891 A0A1B0GUT8 65 aa13.09□□□□□ -0.31
PHGDH-229ENST00000641891 SERTM2A0A1B0GWG4 89 aa13.09□□□□□ -0.31
PHGDH-229ENST00000641891 HSBP1O75506 76 aa13.09□□□□□ -0.31
PHGDH-229ENST00000641891 MSMBP08118 114 aa13.09□□□□□ -0.31
PHGDH-229ENST00000641891 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.09□□□□□ -0.31
PHGDH-229ENST00000641891 PRR25Q96S07 402 aa13.09□□□□□ -0.31
PHGDH-229ENST00000641891 PAM16Q9Y3D7 125 aa13.09□□□□□ -0.31
PHGDH-229ENST00000641891 UTP20O75691 2785 aaKnown RBP13.09□□□□□ -0.31
PHGDH-229ENST00000641891 PRAC2D3DTV9 90 aa13.08□□□□□ -0.31
PHGDH-229ENST00000641891 H3BUX3 64 aa13.08□□□□□ -0.31
PHGDH-229ENST00000641891 ZNF80P51504 273 aaPredicted RBP13.08□□□□□ -0.31
PHGDH-229ENST00000641891 SSTP61278 116 aa13.08□□□□□ -0.31
PHGDH-229ENST00000641891 ERCC8Q13216 396 aa13.08□□□□□ -0.31
PHGDH-229ENST00000641891 LCN12Q6JVE5 192 aa13.08□□□□□ -0.31
PHGDH-229ENST00000641891 CSMD2Q7Z408 3487 aa13.08□□□□□ -0.32
PHGDH-229ENST00000641891 PMCHL1Q16048 86 aa13.08□□□□□ -0.32
PHGDH-229ENST00000641891 USP9XQ93008 2570 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-229ENST00000641891 DOPEY1Q5JWR5 2465 aa13.08□□□□□ -0.32
PHGDH-229ENST00000641891 M0R2Z0 102 aa13.07□□□□□ -0.32
PHGDH-229ENST00000641891 AVPP01185 164 aa13.07□□□□□ -0.32
PHGDH-229ENST00000641891 TRGV3P03979 118 aa13.07□□□□□ -0.32
PHGDH-229ENST00000641891 FAM162BQ5T6X4 162 aa13.07□□□□□ -0.32
PHGDH-229ENST00000641891 CELSR2Q9HCU4 2923 aa13.07□□□□□ -0.32
PHGDH-229ENST00000641891 A0A087X0K7 114 aa13.07□□□□□ -0.32
PHGDH-229ENST00000641891 VAMP8Q9BV40 100 aa13.07□□□□□ -0.32
PHGDH-229ENST00000641891 CRYBG3Q68DQ2 2970 aa13.06□□□□□ -0.32
PHGDH-229ENST00000641891 MUC21A0A0G2JKD1 596 aa13.06□□□□□ -0.32
PHGDH-229ENST00000641891 MUC21A0A140T8X8 626 aa13.06□□□□□ -0.32
PHGDH-229ENST00000641891 TMEM189A5PLL7 270 aa13.06□□□□□ -0.32
PHGDH-229ENST00000641891 S100A7P31151 101 aa13.06□□□□□ -0.32
PHGDH-229ENST00000641891 CRIP2P52943 208 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-229ENST00000641891 MUC21Q5SSG8 566 aa13.06□□□□□ -0.32
PHGDH-229ENST00000641891 Q6ZS46 218 aa13.06□□□□□ -0.32
PHGDH-229ENST00000641891 BORCS7Q96B45 105 aa13.06□□□□□ -0.32
PHGDH-229ENST00000641891 SPOCK3Q9BQ16 436 aa13.06□□□□□ -0.32
PHGDH-229ENST00000641891 HIF1ANQ9NWT6 349 aa13.06□□□□□ -0.32
PHGDH-229ENST00000641891 TRBV12-3P01733 135 aa13.05□□□□□ -0.32
PHGDH-229ENST00000641891 RIGQ13278 110 aa13.05□□□□□ -0.32
PHGDH-229ENST00000641891 SAPCD1Q5SSQ6 148 aa13.05□□□□□ -0.32
PHGDH-229ENST00000641891 LYZL1Q6UWQ5 148 aa13.05□□□□□ -0.32
PHGDH-229ENST00000641891 ARL6IP6Q8N6S5 226 aa13.05□□□□□ -0.32
PHGDH-229ENST00000641891 BBC3Q96PG8 261 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-229ENST00000641891 METTL26Q96S19 204 aa13.05□□□□□ -0.32
PHGDH-229ENST00000641891 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.05□□□□□ -0.32
PHGDH-229ENST00000641891 A6NDX4 124 aa13.05□□□□□ -0.32
PHGDH-229ENST00000641891 FAM181BA6NEQ2 426 aa13.05□□□□□ -0.32
PHGDH-229ENST00000641891 ZNF138P52744 262 aa13.05□□□□□ -0.32
PHGDH-229ENST00000641891 EBLN2Q6P2I7 272 aa13.05□□□□□ -0.32
PHGDH-229ENST00000641891 COX8CQ7Z4L0 72 aa13.05□□□□□ -0.32
PHGDH-229ENST00000641891 ACACBO00763 2458 aa13.05□□□□□ -0.32
PHGDH-229ENST00000641891 FAM223BA6NKX1 122 aa13.04□□□□□ -0.32
PHGDH-229ENST00000641891 RAB9AP51151 201 aa13.04□□□□□ -0.32
PHGDH-229ENST00000641891 BLCAPP62952 87 aa13.04□□□□□ -0.32
PHGDH-229ENST00000641891 FAM223AQ8IWN6 122 aa13.04□□□□□ -0.32
PHGDH-229ENST00000641891 NDFIP1Q9BT67 221 aa13.04□□□□□ -0.32
PHGDH-229ENST00000641891 CLEC5AQ9NY25 188 aa13.04□□□□□ -0.32
PHGDH-229ENST00000641891 TMEM213A2RRL7 107 aa13.04□□□□□ -0.32
PHGDH-229ENST00000641891 EREGO14944 169 aa13.04□□□□□ -0.32
PHGDH-229ENST00000641891 SPG11Q96JI7 2443 aa13.03□□□□□ -0.32
PHGDH-229ENST00000641891 TRAV8-2A0A0B4J237 113 aa13.03□□□□□ -0.32
PHGDH-229ENST00000641891 ARL3P36405 182 aa13.03□□□□□ -0.32
PHGDH-229ENST00000641891 ATOH7Q8N100 152 aa13.03□□□□□ -0.32
PHGDH-229ENST00000641891 C20orf144Q9BQM9 153 aa13.03□□□□□ -0.32
PHGDH-229ENST00000641891 IGF1P05019 195 aa13.03□□□□□ -0.32
PHGDH-229ENST00000641891 Q6AWC8 147 aa13.03□□□□□ -0.32
PHGDH-229ENST00000641891 LCNL1Q6ZST4 164 aa13.03□□□□□ -0.32
PHGDH-229ENST00000641891 ZNF575Q86XF7 245 aa13.03□□□□□ -0.32
PHGDH-229ENST00000641891 GATD1Q8NB37 220 aa13.03□□□□□ -0.32
PHGDH-229ENST00000641891 U3KQE9 123 aa13.03□□□□□ -0.32
PHGDH-229ENST00000641891 IGHV1-24A0A0C4DH33 117 aa13.02□□□□□ -0.33
PHGDH-229ENST00000641891 IGHV3-11P01762 117 aa13.02□□□□□ -0.33
PHGDH-229ENST00000641891 CSN3P07498 182 aa13.02□□□□□ -0.33
PHGDH-229ENST00000641891 UNQ9165/PRO28630Q6UXU0 137 aa13.02□□□□□ -0.33
PHGDH-229ENST00000641891 KLK15Q9H2R5 256 aa13.02□□□□□ -0.33
PHGDH-229ENST00000641891 A0A1B0GV90 55 aa13.01□□□□□ -0.33
PHGDH-229ENST00000641891 C2orf70A6NJV1 201 aa13.01□□□□□ -0.33
PHGDH-229ENST00000641891 B4DSR2 109 aa13.01□□□□□ -0.33
PHGDH-229ENST00000641891 IGHG2P01859 326 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms