RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 NEU4Q8WWR8 484 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-223ENST00000641597 SOX21Q9Y651 276 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-223ENST00000641597 FLNCQ14315 2725 aa13.11□□□□□ -0.31
PHGDH-223ENST00000641597 TMEM11P17152 192 aa13.11□□□□□ -0.31
PHGDH-223ENST00000641597 LY6DQ14210 128 aa13.11□□□□□ -0.31
PHGDH-223ENST00000641597 SRSF8Q9BRL6 282 aaKnown RBP13.11□□□□□ -0.31
PHGDH-223ENST00000641597 ZFP30Q9Y2G7 519 aa13.11□□□□□ -0.31
PHGDH-223ENST00000641597 MSRB2Q9Y3D2 182 aa13.11□□□□□ -0.31
PHGDH-223ENST00000641597 SH2D1AO60880 128 aa13.1□□□□□ -0.31
PHGDH-223ENST00000641597 NCR2O95944 276 aa13.1□□□□□ -0.31
PHGDH-223ENST00000641597 IGHG4P01861 327 aa13.1□□□□□ -0.31
PHGDH-223ENST00000641597 AMN1Q8IY45 258 aa13.1□□□□□ -0.31
PHGDH-223ENST00000641597 KLHDC1Q8N7A1 406 aa13.1□□□□□ -0.31
PHGDH-223ENST00000641597 ABCA2Q9BZC7 2435 aa13.1□□□□□ -0.31
PHGDH-223ENST00000641597 NPIPB5A8MRT5 1133 aa13.1□□□□□ -0.31
PHGDH-223ENST00000641597 SMKR1H3BMG3 65 aa13.1□□□□□ -0.31
PHGDH-223ENST00000641597 M0R1W7 72 aa13.1□□□□□ -0.31
PHGDH-223ENST00000641597 GPR183P32249 361 aa13.1□□□□□ -0.31
PHGDH-223ENST00000641597 FAM231BA6NCW3 169 aa13.09□□□□□ -0.31
PHGDH-223ENST00000641597 G3V318 75 aa13.09□□□□□ -0.31
PHGDH-223ENST00000641597 K7EQM0 130 aa13.09□□□□□ -0.31
PHGDH-223ENST00000641597 IFI27P40305 119 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-223ENST00000641597 RNF182Q8N6D2 247 aa13.09□□□□□ -0.31
PHGDH-223ENST00000641597 Q8N6K4 173 aa13.09□□□□□ -0.31
PHGDH-223ENST00000641597 CHCHD1Q96BP2 118 aaKnown RBP13.09□□□□□ -0.31
PHGDH-223ENST00000641597 AAMDCQ9H7C9 122 aa13.09□□□□□ -0.31
PHGDH-223ENST00000641597 KLRB1Q12918 225 aa13.09□□□□□ -0.31
PHGDH-223ENST00000641597 DMRTA1Q5VZB9 504 aa13.09□□□□□ -0.31
PHGDH-223ENST00000641597 TTC9CQ8N5M4 171 aa13.09□□□□□ -0.31
PHGDH-223ENST00000641597 IGHV3OR16-10A0A075B7F0 116 aa13.08□□□□□ -0.32
PHGDH-223ENST00000641597 PRAC2D3DTV9 90 aa13.08□□□□□ -0.32
PHGDH-223ENST00000641597 D6R8Y8 96 aa13.08□□□□□ -0.32
PHGDH-223ENST00000641597 SNAI2O43623 268 aa13.08□□□□□ -0.32
PHGDH-223ENST00000641597 RELQ04864 619 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-223ENST00000641597 ERCC8Q13216 396 aa13.08□□□□□ -0.32
PHGDH-223ENST00000641597 MRPL52Q86TS9 123 aaKnown RBP13.08□□□□□ -0.32
PHGDH-223ENST00000641597 MSRB1Q9NZV6 116 aa13.08□□□□□ -0.32
PHGDH-223ENST00000641597 ZNF207O43670 478 aaKnown RBP13.08□□□□□ -0.32
PHGDH-223ENST00000641597 CT45A10P0DMU9 189 aa13.08□□□□□ -0.32
PHGDH-223ENST00000641597 ZNF575Q86XF7 245 aa13.08□□□□□ -0.32
PHGDH-223ENST00000641597 Q8N9W7 124 aa13.08□□□□□ -0.32
PHGDH-223ENST00000641597 AJUBAQ96IF1 538 aa13.08□□□□□ -0.32
PHGDH-223ENST00000641597 UBTD1Q9HAC8 227 aa13.08□□□□□ -0.32
PHGDH-223ENST00000641597 CRXO43186 299 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-223ENST00000641597 GAS8-AS1O95177 125 aa13.07□□□□□ -0.32
PHGDH-223ENST00000641597 C15orf32Q32M92 178 aa13.07□□□□□ -0.32
PHGDH-223ENST00000641597 RIGQ13278 110 aa13.07□□□□□ -0.32
PHGDH-223ENST00000641597 LINC00527Q9UJ94 153 aa13.07□□□□□ -0.32
PHGDH-223ENST00000641597 TRBV6-1A0A0K0K1D8 114 aa13.06□□□□□ -0.32
PHGDH-223ENST00000641597 TMEM189A5PLL7 270 aa13.06□□□□□ -0.32
PHGDH-223ENST00000641597 PPIFP30405 207 aaKnown RBP13.06□□□□□ -0.32
PHGDH-223ENST00000641597 NHLH1Q02575 133 aa13.06□□□□□ -0.32
PHGDH-223ENST00000641597 LYPD1Q8N2G4 141 aa13.06□□□□□ -0.32
PHGDH-223ENST00000641597 AP5S1Q9NUS5 200 aa13.06□□□□□ -0.32
PHGDH-223ENST00000641597 ATP6V0E1O15342 81 aa13.06□□□□□ -0.32
PHGDH-223ENST00000641597 CLEC3BP05452 202 aa13.06□□□□□ -0.32
PHGDH-223ENST00000641597 MPV17L2Q567V2 206 aa13.06□□□□□ -0.32
PHGDH-223ENST00000641597 PRSS3P2Q8NHM4 247 aa13.06□□□□□ -0.32
PHGDH-223ENST00000641597 PRR25Q96S07 402 aa13.06□□□□□ -0.32
PHGDH-223ENST00000641597 SIRPDQ9H106 197 aa13.06□□□□□ -0.32
PHGDH-223ENST00000641597 TRAV30A0A087WSZ9 112 aa13.05□□□□□ -0.32
PHGDH-223ENST00000641597 A0A096LNJ9 63 aa13.05□□□□□ -0.32
PHGDH-223ENST00000641597 Q6ZQT7 251 aa13.05□□□□□ -0.32
PHGDH-223ENST00000641597 TCF21O43680 179 aa13.05□□□□□ -0.32
PHGDH-223ENST00000641597 SAA4P35542 130 aa13.05□□□□□ -0.32
PHGDH-223ENST00000641597 CSN1S1P47710 185 aa13.05□□□□□ -0.32
PHGDH-223ENST00000641597 WFDC3Q8IUB2 231 aa13.05□□□□□ -0.32
PHGDH-223ENST00000641597 FOSL1P15407 271 aa13.04□□□□□ -0.32
PHGDH-223ENST00000641597 TMEM219Q86XT9 240 aa13.04□□□□□ -0.32
PHGDH-223ENST00000641597 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
PHGDH-223ENST00000641597 BPESC1Q9GZL8 116 aa13.04□□□□□ -0.32
PHGDH-223ENST00000641597 RNF24Q9Y225 148 aa13.04□□□□□ -0.32
PHGDH-223ENST00000641597 MRPS16Q9Y3D3 137 aaKnown RBP13.04□□□□□ -0.32
PHGDH-223ENST00000641597 PKD1L2Q7Z442 2459 aa13.04□□□□□ -0.32
PHGDH-223ENST00000641597 CENPEQ02224 2701 aa13.04□□□□□ -0.32
PHGDH-223ENST00000641597 UQCRFS1P47985 274 aa13.04□□□□□ -0.32
PHGDH-223ENST00000641597 RHOGP84095 191 aa13.04□□□□□ -0.32
PHGDH-223ENST00000641597 FAM162BQ5T6X4 162 aa13.04□□□□□ -0.32
PHGDH-223ENST00000641597 CCDC144NLQ6NUI1 221 aa13.04□□□□□ -0.32
PHGDH-223ENST00000641597 MAP1LC3CQ9BXW4 147 aa13.04□□□□□ -0.32
PHGDH-223ENST00000641597 SIGLEC8Q9NYZ4 499 aa13.04□□□□□ -0.32
PHGDH-223ENST00000641597 RABAC1Q9UI14 185 aa13.04□□□□□ -0.32
PHGDH-223ENST00000641597 OR5AL1P0C617 328 aa13.03□□□□□ -0.32
PHGDH-223ENST00000641597 OR8A1Q8NGG7 326 aa13.03□□□□□ -0.32
PHGDH-223ENST00000641597 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.03□□□□□ -0.329e-8■□□□□ 11
PHGDH-223ENST00000641597 C19orf84I3L1E1 186 aa13.03□□□□□ -0.32
PHGDH-223ENST00000641597 RPL7P18124 248 aaKnown RBP13.03□□□□□ -0.32
PHGDH-223ENST00000641597 PDE6HQ13956 83 aa13.03□□□□□ -0.32
PHGDH-223ENST00000641597 CLEC19AQ6UXS0 136 aa13.03□□□□□ -0.32
PHGDH-223ENST00000641597 ZNF747Q9BV97 191 aa13.03□□□□□ -0.32
PHGDH-223ENST00000641597 SELENOKQ9Y6D0 94 aa13.03□□□□□ -0.32
PHGDH-223ENST00000641597 FA2HQ7L5A8 372 aa13.02□□□□□ -0.32
PHGDH-223ENST00000641597 THYN1Q9P016 225 aa13.02□□□□□ -0.32
PHGDH-223ENST00000641597 EBI3Q14213 229 aa13.02□□□□□ -0.33
PHGDH-223ENST00000641597 TWIST1Q15672 202 aa13.02□□□□□ -0.33
PHGDH-223ENST00000641597 MRPL51Q4U2R6 128 aaKnown RBP13.02□□□□□ -0.33
PHGDH-223ENST00000641597 DTX2Q86UW9 622 aa13.02□□□□□ -0.33
PHGDH-223ENST00000641597 CCL25O15444 150 aa13.01□□□□□ -0.33
PHGDH-223ENST00000641597 ORM1P02763 201 aa13.01□□□□□ -0.33
PHGDH-223ENST00000641597 GAGE1Q13065 139 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms