RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 A0A1B0GUT8 65 aa13.2□□□□□ -0.3
PHGDH-211ENST00000641213 IGHV4-38-2P0DP08 117 aa13.2□□□□□ -0.3
PHGDH-211ENST00000641213 HLA-DMBP28068 263 aa13.2□□□□□ -0.3
PHGDH-211ENST00000641213 C19orf54Q5BKX5 351 aa13.2□□□□□ -0.3
PHGDH-211ENST00000641213 TRAV41A0A0B4J266 112 aa13.2□□□□□ -0.3
PHGDH-211ENST00000641213 HSBP1O75506 76 aa13.2□□□□□ -0.3
PHGDH-211ENST00000641213 ARMS2P0C7Q2 107 aa13.2□□□□□ -0.3
PHGDH-211ENST00000641213 RAB9AP51151 201 aa13.2□□□□□ -0.3
PHGDH-211ENST00000641213 RNASEKQ6P5S7 137 aaKnown RBP13.2□□□□□ -0.3
PHGDH-211ENST00000641213 COX8CQ7Z4L0 72 aa13.2□□□□□ -0.3
PHGDH-211ENST00000641213 URB1-AS1Q96HZ7 61 aa13.2□□□□□ -0.3
PHGDH-211ENST00000641213 USP9XQ93008 2570 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-211ENST00000641213 C3orf79P0CE67 100 aa13.19□□□□□ -0.3
PHGDH-211ENST00000641213 CRIP2P52943 208 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-211ENST00000641213 RELQ04864 619 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-211ENST00000641213 SAPCD1Q5SSQ6 148 aa13.19□□□□□ -0.3
PHGDH-211ENST00000641213 PRR25Q96S07 402 aa13.19□□□□□ -0.3
PHGDH-211ENST00000641213 VGLL1Q99990 258 aa13.19□□□□□ -0.3
PHGDH-211ENST00000641213 LINC00527Q9UJ94 153 aa13.19□□□□□ -0.3
PHGDH-211ENST00000641213 A0A087X0K7 114 aa13.19□□□□□ -0.3
PHGDH-211ENST00000641213 FBLL1A6NHQ2 334 aaKnown RBP13.19□□□□□ -0.3
PHGDH-211ENST00000641213 SH2D1AO60880 128 aa13.19□□□□□ -0.3
PHGDH-211ENST00000641213 ATP5G2Q06055 141 aa13.19□□□□□ -0.3
PHGDH-211ENST00000641213 LURAP1LQ8IV03 231 aa13.19□□□□□ -0.3
PHGDH-211ENST00000641213 BORCS7Q96B45 105 aa13.19□□□□□ -0.3
PHGDH-211ENST00000641213 NDFIP1Q9BT67 221 aa13.19□□□□□ -0.3
PHGDH-211ENST00000641213 RIGQ13278 110 aa13.18□□□□□ -0.3
PHGDH-211ENST00000641213 FAM162BQ5T6X4 162 aa13.18□□□□□ -0.3
PHGDH-211ENST00000641213 VAMP8Q9BV40 100 aa13.18□□□□□ -0.3
PHGDH-211ENST00000641213 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.17□□□□□ -0.3
PHGDH-211ENST00000641213 M0R2Z0 102 aa13.17□□□□□ -0.3
PHGDH-211ENST00000641213 Q6AWC8 147 aa13.17□□□□□ -0.3
PHGDH-211ENST00000641213 LCN12Q6JVE5 192 aa13.17□□□□□ -0.3
PHGDH-211ENST00000641213 Q8TAT8 98 aa13.17□□□□□ -0.3
PHGDH-211ENST00000641213 C20orf144Q9BQM9 153 aa13.17□□□□□ -0.3
PHGDH-211ENST00000641213 IGHV3-66A0A0C4DH42 116 aa13.17□□□□□ -0.3
PHGDH-211ENST00000641213 TMEM189A5PLL7 270 aa13.17□□□□□ -0.3
PHGDH-211ENST00000641213 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.17□□□□□ -0.3
PHGDH-211ENST00000641213 GATD1Q8NB37 220 aa13.17□□□□□ -0.3
PHGDH-211ENST00000641213 SPOCK3Q9BQ16 436 aa13.17□□□□□ -0.3
PHGDH-211ENST00000641213 PAM16Q9Y3D7 125 aa13.17□□□□□ -0.3
PHGDH-211ENST00000641213 ACACBO00763 2458 aa13.16□□□□□ -0.3
PHGDH-211ENST00000641213 A0A1B0GW15 77 aa13.16□□□□□ -0.3
PHGDH-211ENST00000641213 FAM223BA6NKX1 122 aa13.16□□□□□ -0.3
PHGDH-211ENST00000641213 M0QZ24 198 aa13.16□□□□□ -0.3
PHGDH-211ENST00000641213 MSMBP08118 114 aa13.16□□□□□ -0.3
PHGDH-211ENST00000641213 FAM223AQ8IWN6 122 aa13.16□□□□□ -0.3
PHGDH-211ENST00000641213 SPG11Q96JI7 2443 aa13.16□□□□□ -0.3
PHGDH-211ENST00000641213 UTP20O75691 2785 aaKnown RBP13.16□□□□□ -0.3
PHGDH-211ENST00000641213 IGHV3OR16-13A0A075B7E8 117 aa13.16□□□□□ -0.3
PHGDH-211ENST00000641213 IGHV3-74A0A0B4J1X5 117 aa13.16□□□□□ -0.3
PHGDH-211ENST00000641213 FAM181BA6NEQ2 426 aa13.16□□□□□ -0.3
PHGDH-211ENST00000641213 LY6EQ16553 131 aa13.16□□□□□ -0.3
PHGDH-211ENST00000641213 METTL26Q96S19 204 aa13.16□□□□□ -0.3
PHGDH-211ENST00000641213 ATP6V0BQ99437 205 aa13.16□□□□□ -0.3
PHGDH-211ENST00000641213 TPPP3Q9BW30 176 aa13.16□□□□□ -0.3
PHGDH-211ENST00000641213 TMSB15BA0A087X1C1 80 aa13.15□□□□□ -0.3
PHGDH-211ENST00000641213 ZNF207O43670 478 aaKnown RBP13.15□□□□□ -0.3
PHGDH-211ENST00000641213 TRGV3P03979 118 aa13.15□□□□□ -0.3
PHGDH-211ENST00000641213 ZNF80P51504 273 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-211ENST00000641213 RNF182Q8N6D2 247 aa13.15□□□□□ -0.3
PHGDH-211ENST00000641213 PRAC2D3DTV9 90 aa13.14□□□□□ -0.31
PHGDH-211ENST00000641213 H3BUX3 64 aa13.14□□□□□ -0.31
PHGDH-211ENST00000641213 LYZL1Q6UWQ5 148 aa13.14□□□□□ -0.31
PHGDH-211ENST00000641213 CHCHD1Q96BP2 118 aaKnown RBP13.14□□□□□ -0.31
PHGDH-211ENST00000641213 SLC50A1Q9BRV3 221 aa13.14□□□□□ -0.31
PHGDH-211ENST00000641213 U3KQE9 123 aa13.14□□□□□ -0.31
PHGDH-211ENST00000641213 IGHV3-49A0A0A0MS15 119 aa13.14□□□□□ -0.31
PHGDH-211ENST00000641213 A6NDX4 124 aa13.14□□□□□ -0.31
PHGDH-211ENST00000641213 IGF1P05019 195 aa13.14□□□□□ -0.31
PHGDH-211ENST00000641213 EBLN2Q6P2I7 272 aa13.14□□□□□ -0.31
PHGDH-211ENST00000641213 NRGNQ92686 78 aa13.14□□□□□ -0.31
PHGDH-211ENST00000641213 CELSR2Q9HCU4 2923 aa13.13□□□□□ -0.31
PHGDH-211ENST00000641213 ERCC8Q13216 396 aa13.13□□□□□ -0.31
PHGDH-211ENST00000641213 LBHQ53QV2 105 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-211ENST00000641213 C2orf70A6NJV1 201 aa13.12□□□□□ -0.31
PHGDH-211ENST00000641213 IGHG2P01859 326 aa13.12□□□□□ -0.31
PHGDH-211ENST00000641213 LINC00614P0C842 121 aa13.12□□□□□ -0.31
PHGDH-211ENST00000641213 PMCHL1Q16048 86 aa13.12□□□□□ -0.31
PHGDH-211ENST00000641213 CRYBG3Q68DQ2 2970 aa13.12□□□□□ -0.31
PHGDH-211ENST00000641213 ZNF493Q6ZR52 646 aa13.12□□□□□ -0.31
PHGDH-211ENST00000641213 MIEN1Q9BRT3 115 aa13.12□□□□□ -0.31
PHGDH-211ENST00000641213 C2orf88Q9BSF0 95 aa13.12□□□□□ -0.31
PHGDH-211ENST00000641213 MAP1AP78559 2803 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-211ENST00000641213 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.12□□□□□ -0.319e-8■□□□□ 11
PHGDH-211ENST00000641213 RBAKDNA6NC62 111 aa13.12□□□□□ -0.31
PHGDH-211ENST00000641213 BMI1P35226 326 aa13.12□□□□□ -0.31
PHGDH-211ENST00000641213 HIF1ANQ9NWT6 349 aa13.12□□□□□ -0.31
PHGDH-211ENST00000641213 TRAV8-2A0A0B4J237 113 aa13.11□□□□□ -0.31
PHGDH-211ENST00000641213 B4DSR2 109 aa13.11□□□□□ -0.31
PHGDH-211ENST00000641213 EREGO14944 169 aa13.11□□□□□ -0.31
PHGDH-211ENST00000641213 AVPP01185 164 aa13.11□□□□□ -0.31
PHGDH-211ENST00000641213 BTF3P20290 206 aaKnown RBP13.11□□□□□ -0.31
PHGDH-211ENST00000641213 PPIFP30405 207 aaKnown RBP13.11□□□□□ -0.31
PHGDH-211ENST00000641213 ARL3P36405 182 aa13.11□□□□□ -0.31
PHGDH-211ENST00000641213 CTRLP40313 264 aa13.11□□□□□ -0.31
PHGDH-211ENST00000641213 IGHV1-24A0A0C4DH33 117 aa13.11□□□□□ -0.31
PHGDH-211ENST00000641213 RPS20P60866 119 aaKnown RBP13.11□□□□□ -0.31
PHGDH-211ENST00000641213 ZNF705AQ6ZN79 300 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-211ENST00000641213 ZNF575Q86XF7 245 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms