RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-215	ENST00000639487	C17orf77	Q96MU5	243 aa		4.9	□□□□□ -1.62
RTTN-215	ENST00000639487	MS4A10	Q96PG2	267 aa		4.9	□□□□□ -1.62
RTTN-215	ENST00000639487	SELENOK	Q9Y6D0	94 aa		4.9	□□□□□ -1.62
RTTN-215	ENST00000639487	SMG1	Q96Q15	3661 aa	Known RBP	4.9	□□□□□ -1.62
RTTN-215	ENST00000639487	ATRX	P46100	2492 aa		4.9	□□□□□ -1.62
RTTN-215	ENST00000639487	EPM2A	B3EWF7	344 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	HYPM	O75409	117 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	OR10J3	Q5JRS4	329 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	ADAMTSL5	Q6ZMM2	481 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	TMEM256	Q8N2U0	113 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	OR51H1	Q8NH63	302 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	OR2T6	Q8NHC8	308 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	LINC00477	Q96M19	166 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	ZNF581	Q9P0T4	197 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	CACNA1B	Q00975	2339 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	BMPR1B	O00238	502 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	SEC11B	P0C7V7	166 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	IGLC2	P0DOY2	106 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	MFAP2	P55001	183 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	OR4B1	Q8NGF8	309 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	SLC50A1	Q9BRV3	221 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	FUT9	Q9Y231	359 aa		4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	MRPS16	Q9Y3D3	137 aa	Known RBP	4.9	□□□□□ -1.63
RTTN-215	ENST00000639487	HEATR1	Q9H583	2144 aa	Known RBP	4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	TRAV8-6	A0A0B4J262	113 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	LOC107984640	A0A0U1RRK4	108 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	CCDC179	H3BU77	68 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487		J3QR89	54 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	SPINK8	P0C7L1	97 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	RPL35A	P18077	110 aa	Known RBP	4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	GNG5	P63218	68 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	CX3CL1	P78423	397 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	NDP	Q00604	133 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487		Q6AWC8	147 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	LCN12	Q6JVE5	192 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487		Q6ZWC4	215 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	PXMP4	Q9Y6I8	212 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	FAM208B	Q5VWN6	2430 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	IGLC3	P0DOY3	106 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	SULT1A2	P50226	295 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	ERVK-16	P61578	105 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	ACTL10	Q5JWF8	245 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	C9orf47	Q6ZRZ4	202 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	CNFN	Q9BYD5	112 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	RETN	Q9HD89	108 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	HEYL	Q9NQ87	328 aa	Predicted RBP	4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	EHF	Q9NZC4	300 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	PKIG	Q9Y2B9	76 aa		4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	URB1	O60287	2271 aa	Known RBP	4.89	□□□□□ -1.63
RTTN-215	ENST00000639487	C7orf71	A4D174	169 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	INAFM1	C9JVW0	142 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	HOXD3	P31249	432 aa	Predicted RBP	4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	EMP1	P54849	157 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	CCL20	P78556	96 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	KHDC1L	Q5JSQ8	128 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	UFSP1	Q6NVU6	142 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	CSNK1G2-AS1	Q8NCQ2	148 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	ZC2HC1A	Q96GY0	325 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	HSPB9	Q9BQS6	159 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	SHANK2-AS3	Q9BTD1	123 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	SLC35B3	Q9H1N7	401 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	BANF2	Q9H503	90 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	CCL28	Q9NRJ3	127 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	NAT8B	Q9UHF3	227 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	IGHV7-4-1	A0A0J9YVY3	117 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487		K7EQG2	157 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	CA2	P00918	260 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	IGKV1D-33	P01593	117 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	IGKV1-33	P01594	117 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	IGHV4-59	P01825	116 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	LINC00869	P0C866	280 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	PI3	P19957	117 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	WT1-AS	Q06250	92 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	C4orf26	Q17RF5	130 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	SPATA45	Q537H7	98 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	C8orf86	Q6ZUL3	223 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	STH	Q8IWL8	128 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487		Q8N1Y9	231 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	TMEM147	Q9BVK8	224 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	PARP11	Q9NR21	331 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487		A0A1W2PS18	150 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	OR4C46	A6NHA9	309 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	SH2D7	A6NKC9	451 aa	Predicted RBP	4.88	□□□□□ -1.63
RTTN-215	ENST00000639487		H3BUX3	64 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	PRH1	P02810	166 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	CTSG	P08311	255 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	ATP6V0C	P27449	155 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	OR5C1	Q8NGR4	320 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	TMEM37	Q8WXS4	190 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	ACY3	Q96HD9	319 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	CYYR1	Q96J86	154 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	SH3BGRL3	Q9H299	93 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	FZR1	Q9UM11	496 aa		4.88	□□□□□ -1.63
RTTN-215	ENST00000639487	ATP6V0E1	O15342	81 aa		4.87	□□□□□ -1.63
RTTN-215	ENST00000639487	LGALS4	P56470	323 aa		4.87	□□□□□ -1.63
RTTN-215	ENST00000639487	IL17REL	Q6ZVW7	336 aa		4.87	□□□□□ -1.63
RTTN-215	ENST00000639487	DCANP1	Q8TF63	244 aa		4.87	□□□□□ -1.63
RTTN-215	ENST00000639487	UPK3B	Q9BT76	320 aa		4.87	□□□□□ -1.63
RTTN-215	ENST00000639487	TMEM126A	Q9H061	195 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms