RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 C16orf54Q6UWD8 224 aa12.73□□□□□ -0.37
HCG27-205ENST00000638546 LCNL1Q6ZST4 164 aa12.73□□□□□ -0.37
HCG27-205ENST00000638546 OR4B1Q8NGF8 309 aa12.73□□□□□ -0.37
HCG27-205ENST00000638546 SLC50A1Q9BRV3 221 aa12.73□□□□□ -0.37
HCG27-205ENST00000638546 NPFFR1Q9GZQ6 430 aa12.73□□□□□ -0.37
HCG27-205ENST00000638546 MRPL18Q9H0U6 180 aaKnown RBP12.73□□□□□ -0.37
HCG27-205ENST00000638546 NAT8BQ9UHF3 227 aa12.73□□□□□ -0.37
HCG27-205ENST00000638546 IGHV3-49A0A0A0MS15 119 aa12.73□□□□□ -0.37
HCG27-205ENST00000638546 A8MWL6 223 aa12.73□□□□□ -0.37
HCG27-205ENST00000638546 PSMB8P28062 276 aa12.73□□□□□ -0.37
HCG27-205ENST00000638546 COA6Q5JTJ3 125 aaKnown RBP12.73□□□□□ -0.37
HCG27-205ENST00000638546 LCN12Q6JVE5 192 aa12.73□□□□□ -0.37
HCG27-205ENST00000638546 HIST3H2BBQ8N257 126 aa12.73□□□□□ -0.37
HCG27-205ENST00000638546 ITPR2Q14571 2701 aa12.72□□□□□ -0.37
HCG27-205ENST00000638546 SNURFLB1AK76 121 aa12.72□□□□□ -0.37
HCG27-205ENST00000638546 NPIPB6E9PJ23 425 aa12.72□□□□□ -0.37
HCG27-205ENST00000638546 SMAD7O15105 426 aaKnown RBP12.72□□□□□ -0.37
HCG27-205ENST00000638546 MT-ND6P03923 174 aa12.72□□□□□ -0.37
HCG27-205ENST00000638546 SLC35B1P78383 322 aa12.72□□□□□ -0.37
HCG27-205ENST00000638546 GFI1BQ5VTD9 330 aa12.72□□□□□ -0.37
HCG27-205ENST00000638546 NUP35Q8NFH5 326 aa12.72□□□□□ -0.37
HCG27-205ENST00000638546 ZC2HC1AQ96GY0 325 aa12.72□□□□□ -0.37
HCG27-205ENST00000638546 PEF1Q9UBV8 284 aaKnown RBP12.72□□□□□ -0.37
HCG27-205ENST00000638546 PRRC2AP48634 2157 aaKnown RBP12.71□□□□□ -0.37
HCG27-205ENST00000638546 IGKV2-40A0A087WW87 121 aaPredicted RBP12.71□□□□□ -0.37
HCG27-205ENST00000638546 IGKV2D-40P01614 121 aaPredicted RBP12.71□□□□□ -0.37
HCG27-205ENST00000638546 FRMD6-AS1P0C7T7 363 aa12.71□□□□□ -0.37
HCG27-205ENST00000638546 HLA-DMBP28068 263 aa12.71□□□□□ -0.37
HCG27-205ENST00000638546 SAPCD1Q5SSQ6 148 aa12.71□□□□□ -0.37
HCG27-205ENST00000638546 IGFL4Q6B9Z1 124 aa12.71□□□□□ -0.37
HCG27-205ENST00000638546 MRPL54Q6P161 138 aaKnown RBP12.71□□□□□ -0.37
HCG27-205ENST00000638546 RASL11AQ6T310 242 aa12.71□□□□□ -0.37
HCG27-205ENST00000638546 UNQ9165/PRO28630Q6UXU0 137 aa12.71□□□□□ -0.37
HCG27-205ENST00000638546 TMEM136Q6ZRR5 245 aa12.71□□□□□ -0.37
HCG27-205ENST00000638546 GLMPQ8WWB7 406 aa12.71□□□□□ -0.37
HCG27-205ENST00000638546 NEU1Q99519 415 aa12.71□□□□□ -0.37
HCG27-205ENST00000638546 ZNF702PQ9H963 129 aa12.71□□□□□ -0.37
HCG27-205ENST00000638546 MYO9AB2RTY4 2548 aa12.71□□□□□ -0.37
HCG27-205ENST00000638546 IFITM10A6NMD0 228 aa12.7□□□□□ -0.38
HCG27-205ENST00000638546 PRB4P10163 310 aaPredicted RBP12.7□□□□□ -0.38
HCG27-205ENST00000638546 SIGLECL1Q8N7X8 197 aa12.7□□□□□ -0.38
HCG27-205ENST00000638546 FOXC2Q99958 501 aa12.7□□□□□ -0.38
HCG27-205ENST00000638546 GFRA4Q9GZZ7 299 aa12.7□□□□□ -0.38
HCG27-205ENST00000638546 NOTCH2Q04721 2471 aa12.7□□□□□ -0.38
HCG27-205ENST00000638546 MAP1AP78559 2803 aaPredicted RBP12.7□□□□□ -0.38
HCG27-205ENST00000638546 A0A1W2PS18 150 aa12.7□□□□□ -0.38
HCG27-205ENST00000638546 FAM231BA6NCW3 169 aa12.7□□□□□ -0.38
HCG27-205ENST00000638546 HIGD1CA8MV81 97 aa12.7□□□□□ -0.38
HCG27-205ENST00000638546 ZNF705FA8MVS1 300 aaPredicted RBP12.7□□□□□ -0.38
HCG27-205ENST00000638546 S100A2P29034 98 aa12.7□□□□□ -0.38
HCG27-205ENST00000638546 Q71RC1 249 aaPredicted RBP12.7□□□□□ -0.38
HCG27-205ENST00000638546 COX8CQ7Z4L0 72 aa12.7□□□□□ -0.38
HCG27-205ENST00000638546 WIPF2Q8TF74 440 aaPredicted RBP12.7□□□□□ -0.38
HCG27-205ENST00000638546 MRPL53Q96EL3 112 aaKnown RBP12.7□□□□□ -0.38
HCG27-205ENST00000638546 ASCL2Q99929 193 aa12.7□□□□□ -0.38
HCG27-205ENST00000638546 GPR61Q9BZJ8 451 aa12.7□□□□□ -0.38
HCG27-205ENST00000638546 CLEC5AQ9NY25 188 aa12.7□□□□□ -0.38
HCG27-205ENST00000638546 CT45A10P0DMU9 189 aa12.69□□□□□ -0.38
HCG27-205ENST00000638546 FOXE3Q13461 319 aa12.69□□□□□ -0.38
HCG27-205ENST00000638546 C8orf86Q6ZUL3 223 aa12.69□□□□□ -0.38
HCG27-205ENST00000638546 TCF24Q7RTU0 167 aa12.69□□□□□ -0.38
HCG27-205ENST00000638546 OR2D3Q8NGH3 330 aa12.69□□□□□ -0.38
HCG27-205ENST00000638546 SVEP1Q4LDE5 3571 aa12.68□□□□□ -0.38
HCG27-205ENST00000638546 TRAV8-2A0A0B4J237 113 aa12.68□□□□□ -0.38
HCG27-205ENST00000638546 RBAKDNA6NC62 111 aa12.68□□□□□ -0.38
HCG27-205ENST00000638546 HLA-DQA1P01909 254 aa12.68□□□□□ -0.38
HCG27-205ENST00000638546 ELANEP08246 267 aa12.68□□□□□ -0.38
HCG27-205ENST00000638546 CRIP1P50238 77 aa12.68□□□□□ -0.38
HCG27-205ENST00000638546 RAB4BP61018 213 aa12.68□□□□□ -0.38
HCG27-205ENST00000638546 FAM106AQ4KMX7 169 aa12.68□□□□□ -0.38
HCG27-205ENST00000638546 PDZD11Q5EBL8 140 aa12.68□□□□□ -0.38
HCG27-205ENST00000638546 ATP5L2Q7Z4Y8 100 aa12.68□□□□□ -0.38
HCG27-205ENST00000638546 TMEM86BQ8N661 226 aa12.68□□□□□ -0.38
HCG27-205ENST00000638546 C8orf49Q96NF6 230 aa12.68□□□□□ -0.38
HCG27-205ENST00000638546 PRR25Q96S07 402 aa12.68□□□□□ -0.38
HCG27-205ENST00000638546 VGLL1Q99990 258 aa12.68□□□□□ -0.38
HCG27-205ENST00000638546 K7EMT4 169 aa12.67□□□□□ -0.38
HCG27-205ENST00000638546 CSPG4Q6UVK1 2322 aa12.67□□□□□ -0.38
HCG27-205ENST00000638546 C10orf99Q6UWK7 81 aa12.67□□□□□ -0.38
HCG27-205ENST00000638546 RNF182Q8N6D2 247 aa12.67□□□□□ -0.38
HCG27-205ENST00000638546 GTSF1Q8WW33 167 aa12.67□□□□□ -0.38
HCG27-205ENST00000638546 C12orf57Q99622 126 aa12.67□□□□□ -0.38
HCG27-205ENST00000638546 CREBBPQ92793 2442 aa12.67□□□□□ -0.38
HCG27-205ENST00000638546 IGHV7-4-1A0A0J9YVY3 117 aa12.66□□□□□ -0.38
HCG27-205ENST00000638546 PRAC2D3DTV9 90 aa12.66□□□□□ -0.38
HCG27-205ENST00000638546 SMIM6P0DI80 62 aa12.66□□□□□ -0.38
HCG27-205ENST00000638546 RBPMS2Q6ZRY4 209 aaKnown RBP12.66□□□□□ -0.38
HCG27-205ENST00000638546 IL17RELQ6ZVW7 336 aa12.66□□□□□ -0.38
HCG27-205ENST00000638546 GPHB5Q86YW7 130 aa12.66□□□□□ -0.38
HCG27-205ENST00000638546 Q8N2B8 174 aa12.66□□□□□ -0.38
HCG27-205ENST00000638546 NDFIP1Q9BT67 221 aa12.66□□□□□ -0.38
HCG27-205ENST00000638546 PDZD2O15018 2839 aa12.66□□□□□ -0.38
HCG27-205ENST00000638546 RPLP1P05386 114 aaKnown RBP12.66□□□□□ -0.38
HCG27-205ENST00000638546 PGLYRP4Q96LB8 373 aa12.66□□□□□ -0.38
HCG27-205ENST00000638546 C16orf92Q96LL3 132 aa12.66□□□□□ -0.38
HCG27-205ENST00000638546 A0A1B0GXF2 115 aa12.65□□□□□ -0.38
HCG27-205ENST00000638546 APCSP02743 223 aa12.65□□□□□ -0.38
HCG27-205ENST00000638546 CRISP2P16562 243 aa12.65□□□□□ -0.38
HCG27-205ENST00000638546 FOXA3P55318 350 aaPredicted RBP12.65□□□□□ -0.38
HCG27-205ENST00000638546 DAZ1Q9NQZ3 744 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms