RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 APOHP02749 345 aaPredicted RBP9.43□□□□□ -0.9
CLN8-212ENST00000637083 BCL6BQ8N143 479 aaPredicted RBP9.43□□□□□ -0.9
CLN8-212ENST00000637083 KLHDC1Q8N7A1 406 aa9.43□□□□□ -0.9
CLN8-212ENST00000637083 MEGF9Q9H1U4 602 aa9.43□□□□□ -0.9
CLN8-212ENST00000637083 CHD6Q8TD26 2715 aa9.43□□□□□ -0.9
CLN8-212ENST00000637083 FAM223BA6NKX1 122 aa9.43□□□□□ -0.9
CLN8-212ENST00000637083 BTF3P20290 206 aaKnown RBP9.43□□□□□ -0.9
CLN8-212ENST00000637083 ATP5G2Q06055 141 aa9.43□□□□□ -0.9
CLN8-212ENST00000637083 FAM223AQ8IWN6 122 aa9.43□□□□□ -0.9
CLN8-212ENST00000637083 PRR25Q96S07 402 aa9.43□□□□□ -0.9
CLN8-212ENST00000637083 PAM16Q9Y3D7 125 aa9.43□□□□□ -0.9
CLN8-212ENST00000637083 RBAKDNA6NC62 111 aa9.42□□□□□ -0.9
CLN8-212ENST00000637083 FAM181BA6NEQ2 426 aa9.42□□□□□ -0.9
CLN8-212ENST00000637083 BUB3O43684 328 aa9.42□□□□□ -0.9
CLN8-212ENST00000637083 OR5AL1P0C617 328 aa9.42□□□□□ -0.9
CLN8-212ENST00000637083 LINC00614P0C842 121 aa9.42□□□□□ -0.9
CLN8-212ENST00000637083 CRIP2P52943 208 aaPredicted RBP9.42□□□□□ -0.9
CLN8-212ENST00000637083 SRSF2Q01130 221 aaKnown RBP9.42□□□□□ -0.9
CLN8-212ENST00000637083 ZNF705AQ6ZN79 300 aaPredicted RBP9.42□□□□□ -0.9
CLN8-212ENST00000637083 C10orf105Q8TEF2 133 aa9.42□□□□□ -0.9
CLN8-212ENST00000637083 METTL26Q96S19 204 aa9.42□□□□□ -0.9
CLN8-212ENST00000637083 ZFAND3Q9H8U3 227 aa9.42□□□□□ -0.9
CLN8-212ENST00000637083 TRAV41A0A0B4J266 112 aa9.41□□□□□ -0.9
CLN8-212ENST00000637083 CRIP1P50238 77 aa9.41□□□□□ -0.9
CLN8-212ENST00000637083 CLEC19AQ6UXS0 136 aa9.41□□□□□ -0.9
CLN8-212ENST00000637083 Q8N976 141 aa9.41□□□□□ -0.9
CLN8-212ENST00000637083 CLEC5AQ9NY25 188 aa9.41□□□□□ -0.9
CLN8-212ENST00000637083 SMAD5-AS1Q9Y6J3 95 aa9.41□□□□□ -0.9
CLN8-212ENST00000637083 IGSF10Q6WRI0 2623 aa9.41□□□□□ -0.9
CLN8-212ENST00000637083 SH2D1AO60880 128 aa9.41□□□□□ -0.9
CLN8-212ENST00000637083 ARMS2P0C7Q2 107 aa9.41□□□□□ -0.9
CLN8-212ENST00000637083 LCN12Q6JVE5 192 aa9.41□□□□□ -0.9
CLN8-212ENST00000637083 ZNF493Q6ZR52 646 aa9.41□□□□□ -0.9
CLN8-212ENST00000637083 C8orf49Q96NF6 230 aa9.41□□□□□ -0.9
CLN8-212ENST00000637083 IGKV2-40A0A087WW87 121 aaPredicted RBP9.4□□□□□ -0.9
CLN8-212ENST00000637083 C20orf202A1L168 122 aa9.4□□□□□ -0.9
CLN8-212ENST00000637083 G3V318 75 aa9.4□□□□□ -0.9
CLN8-212ENST00000637083 IGKV2D-40P01614 121 aaPredicted RBP9.4□□□□□ -0.9
CLN8-212ENST00000637083 SPATA45Q537H7 98 aa9.4□□□□□ -0.9
CLN8-212ENST00000637083 MRPL53Q96EL3 112 aaKnown RBP9.4□□□□□ -0.9
CLN8-212ENST00000637083 CCDC140Q96MF4 163 aa9.4□□□□□ -0.9
CLN8-212ENST00000637083 RNF114Q9Y508 228 aa9.4□□□□□ -0.9
CLN8-212ENST00000637083 IGHV4-61A0A0C4DH41 118 aa9.39□□□□□ -0.91
CLN8-212ENST00000637083 ATP5J2P56134 94 aa9.39□□□□□ -0.91
CLN8-212ENST00000637083 DSCR9P59020 149 aa9.39□□□□□ -0.91
CLN8-212ENST00000637083 TMEM70Q9BUB7 260 aa9.39□□□□□ -0.91
CLN8-212ENST00000637083 HIF1ANQ9NWT6 349 aa9.39□□□□□ -0.91
CLN8-212ENST00000637083 FLNCQ14315 2725 aa9.39□□□□□ -0.91
CLN8-212ENST00000637083 TRAV40A0A0B4J280 105 aa9.39□□□□□ -0.91
CLN8-212ENST00000637083 H3BUA1 57 aa9.39□□□□□ -0.91
CLN8-212ENST00000637083 LEPROTL1O95214 131 aa9.39□□□□□ -0.91
CLN8-212ENST00000637083 BRI3O95415 125 aa9.39□□□□□ -0.91
CLN8-212ENST00000637083 TDRG1Q3Y452 100 aa9.39□□□□□ -0.91
CLN8-212ENST00000637083 SPOCK3Q9BQ16 436 aa9.39□□□□□ -0.91
CLN8-212ENST00000637083 TPPP3Q9BW30 176 aa9.39□□□□□ -0.91
CLN8-212ENST00000637083 SPG11Q96JI7 2443 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 FABP5P3A8MUU1 101 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 CTRLP40313 264 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 SSTP61278 116 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 LYZL1Q6UWQ5 148 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 URB1-AS1Q96HZ7 61 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 UQCR10Q9UDW1 63 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 IGHV3-35A0A0C4DH35 117 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 A0A1B0GV90 55 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 C2orf70A6NJV1 201 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 IGF1P05019 195 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 C19orf54Q5BKX5 351 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 TMEM219Q86XT9 240 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 LINC00469Q8N7U9 141 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 ASCL2Q99929 193 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 HSPB8Q9UJY1 196 aa9.38□□□□□ -0.91
CLN8-212ENST00000637083 IGHV1-24A0A0C4DH33 117 aa9.37□□□□□ -0.91
CLN8-212ENST00000637083 LINC01548A6NM66 108 aa9.37□□□□□ -0.91
CLN8-212ENST00000637083 TRGV3P03979 118 aa9.37□□□□□ -0.91
CLN8-212ENST00000637083 MSMBP08118 114 aa9.37□□□□□ -0.91
CLN8-212ENST00000637083 GATA3P23771 443 aa9.37□□□□□ -0.91
CLN8-212ENST00000637083 EBLN2Q6P2I7 272 aa9.37□□□□□ -0.91
CLN8-212ENST00000637083 PIFOQ8TCI5 191 aa9.37□□□□□ -0.91
CLN8-212ENST00000637083 USMG5Q96IX5 58 aa9.37□□□□□ -0.91
CLN8-212ENST00000637083 VGLL1Q99990 258 aa9.37□□□□□ -0.91
CLN8-212ENST00000637083 SNHG12Q9BXW3 62 aa9.37□□□□□ -0.91
CLN8-212ENST00000637083 USP9XQ93008 2570 aaPredicted RBP9.37□□□□□ -0.91
CLN8-212ENST00000637083 DOPEY1Q5JWR5 2465 aa9.37□□□□□ -0.91
CLN8-212ENST00000637083 ZFHX3Q15911 3703 aa9.36□□□□□ -0.91
CLN8-212ENST00000637083 IGHV3OR16-10A0A075B7F0 116 aa9.36□□□□□ -0.91
CLN8-212ENST00000637083 TRAV9-2A0A087WT02 112 aa9.36□□□□□ -0.91
CLN8-212ENST00000637083 CLPSL1A2RUU4 121 aa9.36□□□□□ -0.91
CLN8-212ENST00000637083 CRXO43186 299 aaPredicted RBP9.36□□□□□ -0.91
CLN8-212ENST00000637083 IGHG4P01861 327 aa9.36□□□□□ -0.91
CLN8-212ENST00000637083 BRD3OSQ6XYD6 125 aa9.36□□□□□ -0.91
CLN8-212ENST00000637083 Q71RC1 249 aaPredicted RBP9.36□□□□□ -0.91
CLN8-212ENST00000637083 FER1L6-AS1Q8NA97 138 aa9.36□□□□□ -0.91
CLN8-212ENST00000637083 MAP1LC3CQ9BXW4 147 aa9.36□□□□□ -0.91
CLN8-212ENST00000637083 U3KQE9 123 aa9.36□□□□□ -0.91
CLN8-212ENST00000637083 IGHV3OR16-8A0A075B7F1 116 aa9.36□□□□□ -0.91
CLN8-212ENST00000637083 TMSB15BA0A087X1C1 80 aa9.36□□□□□ -0.91
CLN8-212ENST00000637083 B4DSR2 109 aa9.36□□□□□ -0.91
CLN8-212ENST00000637083 TMEM78Q5T7P6 136 aa9.36□□□□□ -0.91
CLN8-212ENST00000637083 FAM104BQ5XKR9 115 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms