RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 FAM60AQ9NP50 221 aa2.05□□□□□ -2.08
CNOT1-223ENST00000628857 PRO0461Q9UI25 63 aa2.05□□□□□ -2.08
CNOT1-223ENST00000628857 ZNF835Q9Y2P0 537 aa2.05□□□□□ -2.08
CNOT1-223ENST00000628857 F11RQ9Y624 299 aaKnown RBP2.05□□□□□ -2.08
CNOT1-223ENST00000628857 DLC1Q96QB1 1528 aa2.05□□□□□ -2.08
CNOT1-223ENST00000628857 VWDEQ8N2E2 1590 aa2.05□□□□□ -2.08
CNOT1-223ENST00000628857 LAMC3Q9Y6N6 1575 aa2.05□□□□□ -2.08
CNOT1-223ENST00000628857 NESP48681 1621 aa2.05□□□□□ -2.08
CNOT1-223ENST00000628857 ARHGEF28Q8N1W1 1705 aaKnown RBP2.05□□□□□ -2.08
CNOT1-223ENST00000628857 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.05□□□□□ -2.08
CNOT1-223ENST00000628857 SIPA1L3O60292 1781 aaPredicted RBP2.05□□□□□ -2.08
CNOT1-223ENST00000628857 RGPD2P0DJD1 1756 aa2.05□□□□□ -2.08
CNOT1-223ENST00000628857 AFDNP55196 1824 aaKnown RBP2.05□□□□□ -2.08
CNOT1-223ENST00000628857 MCM3APO60318 1980 aa2.05□□□□□ -2.08
CNOT1-223ENST00000628857 TDRD6O60522 2096 aaKnown RBP2.05□□□□□ -2.08
CNOT1-223ENST00000628857 TRBV24-1A0A075B6N3 115 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 TRGV5A0A0B4J1U4 118 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 IGHV6-1A0A0B4J1U7 121 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 TRBV27A0A0K0K1C4 114 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 MUC21A0A140T8X8 626 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 A8MWL6 223 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 UMAD1C9J7I0 102 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 H3BUT2 72 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 BTAF1O14981 1849 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 FSTL3O95633 263 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 IGHV3-23P01764 117 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 ZNF688P0C7X2 276 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 INAFM2P0DMQ5 153 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 COX6A1P12074 109 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 S100A4P26447 101 aaKnown RBP2.04□□□□□ -2.08
CNOT1-223ENST00000628857 FAUP35544 74 aaKnown RBP2.04□□□□□ -2.08
CNOT1-223ENST00000628857 CSN1S1P47710 185 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 CLTCL1P53675 1640 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 LINC00313P59037 77 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 MRPS36P82909 103 aaKnown RBP2.04□□□□□ -2.08
CNOT1-223ENST00000628857 FOXF1Q12946 379 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 CDK5R1Q15078 307 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 SCN9AQ15858 1988 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 ORMDL2Q53FV1 153 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 MPV17L2Q567V2 206 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 PYDC2Q56P42 97 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 LGALS9CQ6DKI2 356 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 EBLN2Q6P2I7 272 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 LINC00173Q6ZV60 143 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 H2AFVQ71UI9 128 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 PRNTQ86SH4 94 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 RALGAPBQ86X10 1494 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 ZNF101Q8IZC7 436 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 NKAPP1Q8N9T2 125 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 EXPH5Q8NEV8 1989 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 OR10G2Q8NGC3 310 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 OR8A1Q8NGG7 326 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 CMTM2Q8TAZ6 248 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 FAM213BQ8TBF2 198 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 FAM57AQ8TBR7 257 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 TMEM158Q8WZ71 300 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 H1FXQ92522 213 aaKnown RBP2.04□□□□□ -2.08
CNOT1-223ENST00000628857 LINC00167Q96N53 147 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 TRPM6Q9BX84 2022 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 C16orf95Q9H693 158 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 PLEKHF2Q9H8W4 249 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 TMEM242Q9NWH2 141 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 TP73-AS1Q9UF72 201 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 ZNF706Q9Y5V0 76 aaPredicted RBP2.04□□□□□ -2.08
CNOT1-223ENST00000628857 SLC25A15Q9Y619 301 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 V9GYH0 126 aa2.04□□□□□ -2.08
CNOT1-223ENST00000628857 POLEQ07864 2286 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 ANKRD12Q6UB98 2062 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 NUP188Q5SRE5 1749 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 PREX1Q8TCU6 1659 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 ROBO1Q9Y6N7 1651 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 SAMD9Q5K651 1589 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 CEP170Q5SW79 1584 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 MEGF6O75095 1541 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 ADAMTS13Q76LX8 1427 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 IGKV1-27A0A075B6S5 117 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 FXYD6-FXYD2A0A087WZ82 144 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 TRAV19A0A0A6YYK7 116 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 NAP1L6A6NFF2 107 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 C17orf112F2Z3M2 114 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 SYS1-DBNDD2H3BUS1 97 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 K7ERJ3 54 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 ATOX1O00244 68 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 PLA2G10O15496 165 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 SRP19P09132 144 aaKnown RBP2.03□□□□□ -2.08
CNOT1-223ENST00000628857 CBLN1P23435 193 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 HLA-DMBP28068 263 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 POLR2IP36954 125 aaKnown RBP2.03□□□□□ -2.08
CNOT1-223ENST00000628857 ZNF80P51504 273 aaPredicted RBP2.03□□□□□ -2.08
CNOT1-223ENST00000628857 ATP5EP56381 51 aaPredicted RBP2.03□□□□□ -2.08
CNOT1-223ENST00000628857 LSM3P62310 102 aaKnown RBP2.03□□□□□ -2.08
CNOT1-223ENST00000628857 RPL23P62829 140 aaKnown RBP2.03□□□□□ -2.08
CNOT1-223ENST00000628857 ETDBQ3ZM63 59 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 TMEM155Q4W5P6 130 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 C1orf100Q5SVJ3 147 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 MDP1Q86V88 176 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 AMN1Q8IY45 258 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 CEND1Q8N111 149 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 C3orf56Q8N813 242 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 APCDD1LQ8NCL9 501 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms