RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 CCDC140Q96MF4 163 aa14.85□□□□□ -0.03
MMP28-204ENST00000615136 SSBP4Q9BWG4 385 aaPredicted RBP14.85□□□□□ -0.03
MMP28-204ENST00000615136 CAMPP49913 170 aa14.84□□□□□ -0.03
MMP28-204ENST00000615136 C19orf54Q5BKX5 351 aa14.84□□□□□ -0.03
MMP28-204ENST00000615136 RBPMS2Q6ZRY4 209 aaKnown RBP14.84□□□□□ -0.03
MMP28-204ENST00000615136 Q6ZS46 218 aa14.84□□□□□ -0.03
MMP28-204ENST00000615136 Q71RC1 249 aaPredicted RBP14.84□□□□□ -0.03
MMP28-204ENST00000615136 PRNTQ86SH4 94 aa14.84□□□□□ -0.03
MMP28-204ENST00000615136 NIT1Q86X76 327 aa14.84□□□□□ -0.03
MMP28-204ENST00000615136 VN1R17PQ8TDU5 208 aa14.84□□□□□ -0.03
MMP28-204ENST00000615136 A6NDX4 124 aa14.83□□□□□ -0.03
MMP28-204ENST00000615136 RNF223E7ERA6 249 aa14.83□□□□□ -0.03
MMP28-204ENST00000615136 PDE6HQ13956 83 aa14.83□□□□□ -0.03
MMP28-204ENST00000615136 LINC00469Q8N7U9 141 aa14.83□□□□□ -0.03
MMP28-204ENST00000615136 APCP25054 2843 aa14.83□□□□□ -0.03
MMP28-204ENST00000615136 CLEC3BP05452 202 aa14.83□□□□□ -0.04
MMP28-204ENST00000615136 LINC01356Q8N9X3 169 aa14.83□□□□□ -0.04
MMP28-204ENST00000615136 ZFP30Q9Y2G7 519 aa14.83□□□□□ -0.04
MMP28-204ENST00000615136 NAV2Q8IVL1 2488 aa14.82□□□□□ -0.04
MMP28-204ENST00000615136 ZNF785A8K8V0 405 aa14.82□□□□□ -0.04
MMP28-204ENST00000615136 KRTDAPP60985 99 aa14.82□□□□□ -0.04
MMP28-204ENST00000615136 TDRG1Q3Y452 100 aa14.82□□□□□ -0.04
MMP28-204ENST00000615136 TRAV41A0A0B4J266 112 aa14.82□□□□□ -0.04
MMP28-204ENST00000615136 K7EQM0 130 aa14.82□□□□□ -0.04
MMP28-204ENST00000615136 BLCAPP62952 87 aa14.82□□□□□ -0.04
MMP28-204ENST00000615136 OR2D3Q8NGH3 330 aa14.82□□□□□ -0.04
MMP28-204ENST00000615136 PGLYRP4Q96LB8 373 aa14.82□□□□□ -0.04
MMP28-204ENST00000615136 TXN2Q99757 166 aa14.82□□□□□ -0.04
MMP28-204ENST00000615136 CR1P17927 2039 aa14.81□□□□□ -0.04
MMP28-204ENST00000615136 DIRC3C9JPN6 131 aa14.81□□□□□ -0.04
MMP28-204ENST00000615136 PSG3Q16557 428 aa14.81□□□□□ -0.04
MMP28-204ENST00000615136 CLEC19AQ6UXS0 136 aa14.81□□□□□ -0.04
MMP28-204ENST00000615136 VAMP8Q9BV40 100 aa14.81□□□□□ -0.04
MMP28-204ENST00000615136 ZNF469Q96JG9 3925 aaPredicted RBP14.81□□□□□ -0.04
MMP28-204ENST00000615136 A0A1B0GV90 55 aa14.8□□□□□ -0.04
MMP28-204ENST00000615136 TGFAP01135 160 aa14.8□□□□□ -0.04
MMP28-204ENST00000615136 FOXA3P55318 350 aaPredicted RBP14.8□□□□□ -0.04
MMP28-204ENST00000615136 HIST2H2BCQ6DN03 193 aa14.8□□□□□ -0.04
MMP28-204ENST00000615136 FAM19A2Q8N3H0 131 aa14.8□□□□□ -0.04
MMP28-204ENST00000615136 ZC2HC1AQ96GY0 325 aa14.8□□□□□ -0.04
MMP28-204ENST00000615136 PSG8Q9UQ74 426 aa14.8□□□□□ -0.04
MMP28-204ENST00000615136 EREGO14944 169 aa14.8□□□□□ -0.04
MMP28-204ENST00000615136 APOHP02749 345 aaPredicted RBP14.8□□□□□ -0.04
MMP28-204ENST00000615136 C3orf79P0CE67 100 aa14.79□□□□□ -0.04
MMP28-204ENST00000615136 GATA3P23771 443 aa14.79□□□□□ -0.04
MMP28-204ENST00000615136 DEFB113Q30KQ7 82 aa14.79□□□□□ -0.04
MMP28-204ENST00000615136 ZFAND3Q9H8U3 227 aa14.79□□□□□ -0.04
MMP28-204ENST00000615136 SCGB2A1O75556 95 aa14.78□□□□□ -0.04
MMP28-204ENST00000615136 CRIP2P52943 208 aaPredicted RBP14.78□□□□□ -0.04
MMP28-204ENST00000615136 ASCL2Q99929 193 aa14.78□□□□□ -0.04
MMP28-204ENST00000615136 PAM16Q9Y3D7 125 aa14.78□□□□□ -0.04
MMP28-204ENST00000615136 DOPEY2Q9Y3R5 2298 aa14.78□□□□□ -0.04
MMP28-204ENST00000615136 HAX1O00165 279 aa14.78□□□□□ -0.04
MMP28-204ENST00000615136 HSBP1O75506 76 aa14.78□□□□□ -0.04
MMP28-204ENST00000615136 NTF3P20783 257 aa14.78□□□□□ -0.04
MMP28-204ENST00000615136 DEFB112Q30KQ8 113 aa14.78□□□□□ -0.04
MMP28-204ENST00000615136 AAMDCQ9H7C9 122 aa14.78□□□□□ -0.04
MMP28-204ENST00000615136 SERTM2A0A1B0GWG4 89 aa14.77□□□□□ -0.04
MMP28-204ENST00000615136 M0R3E3 92 aa14.77□□□□□ -0.04
MMP28-204ENST00000615136 Q5PR19 223 aa14.77□□□□□ -0.04
MMP28-204ENST00000615136 MIEN1Q9BRT3 115 aa14.77□□□□□ -0.04
MMP28-204ENST00000615136 SNHG12Q9BXW3 62 aa14.77□□□□□ -0.04
MMP28-204ENST00000615136 SMAD5-AS1Q9Y6J3 95 aa14.77□□□□□ -0.04
MMP28-204ENST00000615136 IGHG2P01859 326 aa14.76□□□□□ -0.05
MMP28-204ENST00000615136 IGHV4-31P0DP07 118 aa14.76□□□□□ -0.05
MMP28-204ENST00000615136 RPL7P18124 248 aaKnown RBP14.76□□□□□ -0.05
MMP28-204ENST00000615136 LOXL1Q08397 574 aaPredicted RBP14.76□□□□□ -0.05
MMP28-204ENST00000615136 FAM162BQ5T6X4 162 aa14.76□□□□□ -0.05
MMP28-204ENST00000615136 BORCS7Q96B45 105 aa14.76□□□□□ -0.05
MMP28-204ENST00000615136 URB1-AS1Q96HZ7 61 aa14.76□□□□□ -0.05
MMP28-204ENST00000615136 RABAC1Q9UI14 185 aa14.76□□□□□ -0.05
MMP28-204ENST00000615136 CLPSL1A2RUU4 121 aa14.76□□□□□ -0.05
MMP28-204ENST00000615136 IGHV4-59P01825 116 aa14.76□□□□□ -0.05
MMP28-204ENST00000615136 IGF1P05019 195 aa14.76□□□□□ -0.05
MMP28-204ENST00000615136 PLA2G2AP14555 144 aa14.76□□□□□ -0.05
MMP28-204ENST00000615136 RAB4AP20338 218 aa14.76□□□□□ -0.05
MMP28-204ENST00000615136 PSG9Q00887 426 aa14.76□□□□□ -0.05
MMP28-204ENST00000615136 MRPL52Q86TS9 123 aaKnown RBP14.76□□□□□ -0.05
MMP28-204ENST00000615136 ARL6IP6Q8N6S5 226 aa14.76□□□□□ -0.05
MMP28-204ENST00000615136 EEF1AKMT3Q96AZ1 226 aa14.76□□□□□ -0.05
MMP28-204ENST00000615136 PPIFP30405 207 aaKnown RBP14.75□□□□□ -0.05
MMP28-204ENST00000615136 CTRLP40313 264 aa14.75□□□□□ -0.05
MMP28-204ENST00000615136 RNASEKQ6P5S7 137 aaKnown RBP14.75□□□□□ -0.05
MMP28-204ENST00000615136 KRTAP1-3Q8IUG1 177 aa14.75□□□□□ -0.05
MMP28-204ENST00000615136 MXRA5Q9NR99 2828 aa14.75□□□□□ -0.05
MMP28-204ENST00000615136 LOC102724200A0A096LPH7 203 aaPredicted RBP14.75□□□□□ -0.05
MMP28-204ENST00000615136 J3QKU1 62 aa14.75□□□□□ -0.05
MMP28-204ENST00000615136 TRGV3P03979 118 aa14.75□□□□□ -0.05
MMP28-204ENST00000615136 CRIP1P50238 77 aa14.75□□□□□ -0.05
MMP28-204ENST00000615136 ATP5G2Q06055 141 aa14.75□□□□□ -0.05
MMP28-204ENST00000615136 GATD1Q8NB37 220 aa14.75□□□□□ -0.05
MMP28-204ENST00000615136 BEX4Q9NWD9 120 aaPredicted RBP14.75□□□□□ -0.05
MMP28-204ENST00000615136 TEX15Q9BXT5 2789 aa14.74□□□□□ -0.05
MMP28-204ENST00000615136 IGHV3OR16-13A0A075B7E8 117 aa14.74□□□□□ -0.05
MMP28-204ENST00000615136 IGHV3-74A0A0B4J1X5 117 aa14.74□□□□□ -0.05
MMP28-204ENST00000615136 IGHV3-66A0A0C4DH42 116 aa14.74□□□□□ -0.05
MMP28-204ENST00000615136 FAM181BA6NEQ2 426 aa14.74□□□□□ -0.05
MMP28-204ENST00000615136 M0R143 59 aa14.74□□□□□ -0.05
MMP28-204ENST00000615136 M0R2Z0 102 aa14.74□□□□□ -0.05
MMP28-204ENST00000615136 CHEK1O14757 476 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms