RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 SPANXDQ9BXN6 97 aa9.7□□□□□ -0.86
SLC6A6-204ENST00000613060 TP53TG1Q9Y2A0 90 aa9.7□□□□□ -0.86
SLC6A6-204ENST00000613060 SMKR1H3BMG3 65 aa9.69□□□□□ -0.86
SLC6A6-204ENST00000613060 PDE6HQ13956 83 aa9.69□□□□□ -0.86
SLC6A6-204ENST00000613060 NDUFB8O95169 186 aa9.69□□□□□ -0.86
SLC6A6-204ENST00000613060 CD177Q8N6Q3 437 aa9.69□□□□□ -0.86
SLC6A6-204ENST00000613060 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.69□□□□□ -0.86
SLC6A6-204ENST00000613060 SPATA31B1PQ5VZV4 182 aa9.69□□□□□ -0.86
SLC6A6-204ENST00000613060 TMEM242Q9NWH2 141 aa9.69□□□□□ -0.86
SLC6A6-204ENST00000613060 RTTNQ86VV8 2226 aa9.69□□□□□ -0.86
SLC6A6-204ENST00000613060 RS1O15537 224 aa9.69□□□□□ -0.86
SLC6A6-204ENST00000613060 IFITM3Q01628 133 aa9.69□□□□□ -0.86
SLC6A6-204ENST00000613060 C11orf45Q8TAV5 145 aa9.69□□□□□ -0.86
SLC6A6-204ENST00000613060 MRPL36Q9P0J6 103 aaKnown RBP9.69□□□□□ -0.86
SLC6A6-204ENST00000613060 PFN1P07737 140 aaKnown RBP9.69□□□□□ -0.86
SLC6A6-204ENST00000613060 IGKV1-6A0A0C4DH72 117 aa9.68□□□□□ -0.86
SLC6A6-204ENST00000613060 SVIPQ8NHG7 77 aa9.68□□□□□ -0.86
SLC6A6-204ENST00000613060 THADAQ6YHU6 1953 aa9.68□□□□□ -0.86
SLC6A6-204ENST00000613060 TRAV13-2A0A0B4J235 113 aa9.68□□□□□ -0.86
SLC6A6-204ENST00000613060 HERV-K104P63124 156 aa9.68□□□□□ -0.86
SLC6A6-204ENST00000613060 SHANK2-AS3Q9BTD1 123 aa9.68□□□□□ -0.86
SLC6A6-204ENST00000613060 IGHV1-24A0A0C4DH33 117 aa9.68□□□□□ -0.86
SLC6A6-204ENST00000613060 LINC00114Q6XXX2 140 aa9.68□□□□□ -0.86
SLC6A6-204ENST00000613060 HLA-DRB4P13762 266 aa9.67□□□□□ -0.86
SLC6A6-204ENST00000613060 CFHR2P36980 270 aa9.67□□□□□ -0.86
SLC6A6-204ENST00000613060 Q6ZS92 163 aa9.67□□□□□ -0.86
SLC6A6-204ENST00000613060 HLA-DRB4X5D2U9 266 aa9.67□□□□□ -0.86
SLC6A6-204ENST00000613060 A0A1B0GUL6 1792 aa9.67□□□□□ -0.86
SLC6A6-204ENST00000613060 RHOHQ15669 191 aa9.67□□□□□ -0.86
SLC6A6-204ENST00000613060 PCP2Q8IVA1 136 aa9.67□□□□□ -0.86
SLC6A6-204ENST00000613060 KIR2DL5BQ8NHK3 375 aa9.67□□□□□ -0.86
SLC6A6-204ENST00000613060 IGHV2-70DA0A0C4DH43 119 aa9.67□□□□□ -0.86
SLC6A6-204ENST00000613060 NCR3O14931 201 aa9.67□□□□□ -0.86
SLC6A6-204ENST00000613060 SMCHD1A6NHR9 2005 aa9.67□□□□□ -0.86
SLC6A6-204ENST00000613060 FSHBP01225 129 aa9.67□□□□□ -0.86
SLC6A6-204ENST00000613060 SPINK8P0C7L1 97 aa9.67□□□□□ -0.86
SLC6A6-204ENST00000613060 Q6ZWC4 215 aa9.67□□□□□ -0.86
SLC6A6-204ENST00000613060 NAA38Q9BRA0 125 aaKnown RBP9.67□□□□□ -0.86
SLC6A6-204ENST00000613060 FUSP35637 526 aaKnown RBP eCLIP9.66□□□□□ -0.862e-6■■□□□ 13
SLC6A6-204ENST00000613060 PRSS33Q8NF86 280 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 ESPL1Q14674 2120 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 STPG4Q8N801 248 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 LINC00479Q96M42 142 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 LY96Q9Y6Y9 160 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 CKAP5Q14008 2032 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 CACNA1BQ00975 2339 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 PLXNB2O15031 1838 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 RNF222A6NCQ9 220 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 SRSF2Q01130 221 aaKnown RBP9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 ZNF124Q15973 351 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 MRPL23Q16540 153 aaKnown RBP9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 AGMATQ9BSE5 352 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 PI4KAP42356 2102 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 NHSQ6T4R5 1651 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 ATP5G1P05496 136 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 PLA2G5P39877 138 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 HERVK_113P63121 156 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 MRPL27Q9P0M9 148 aaKnown RBP9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 INTS1Q8N201 2190 aaKnown RBP9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 TJP1Q07157 1748 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 ZNF646O15015 1829 aaPredicted RBP9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 IGKV1-9A0A0C4DH69 117 aa9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 RBM3P98179 157 aaKnown RBP9.66□□□□□ -0.86
SLC6A6-204ENST00000613060 Q86TA4 180 aa9.65□□□□□ -0.86
SLC6A6-204ENST00000613060 NUP35Q8NFH5 326 aa9.65□□□□□ -0.86
SLC6A6-204ENST00000613060 ELANEP08246 267 aa9.65□□□□□ -0.86
SLC6A6-204ENST00000613060 AMN1Q8IY45 258 aa9.65□□□□□ -0.86
SLC6A6-204ENST00000613060 LRP5O75197 1615 aa9.65□□□□□ -0.86
SLC6A6-204ENST00000613060 LY6G6EA0A0G2JKS1 128 aa9.65□□□□□ -0.86
SLC6A6-204ENST00000613060 NDUFA4O00483 81 aa9.65□□□□□ -0.86
SLC6A6-204ENST00000613060 FGFBP3Q8TAT2 258 aa9.65□□□□□ -0.86
SLC6A6-204ENST00000613060 MTCL1Q9Y4B5 1905 aaKnown RBP9.65□□□□□ -0.86
SLC6A6-204ENST00000613060 LYL1P12980 280 aa9.65□□□□□ -0.86
SLC6A6-204ENST00000613060 C2orf66Q6UXQ4 117 aa9.65□□□□□ -0.86
SLC6A6-204ENST00000613060 C1orf194Q5T5A4 169 aa9.65□□□□□ -0.87
SLC6A6-204ENST00000613060 GFRA4Q9GZZ7 299 aa9.65□□□□□ -0.87
SLC6A6-204ENST00000613060 VSIRQ9H7M9 311 aa9.65□□□□□ -0.87
SLC6A6-204ENST00000613060 C5orf38Q86SI9 138 aa9.65□□□□□ -0.87
SLC6A6-204ENST00000613060 U3KQE9 123 aa9.65□□□□□ -0.87
SLC6A6-204ENST00000613060 SCN9AQ15858 1988 aa9.64□□□□□ -0.87
SLC6A6-204ENST00000613060 MYO16Q9Y6X6 1858 aa9.64□□□□□ -0.87
SLC6A6-204ENST00000613060 TBX6O95947 436 aaPredicted RBP9.64□□□□□ -0.87
SLC6A6-204ENST00000613060 NMSQ5H8A3 153 aa9.64□□□□□ -0.87
SLC6A6-204ENST00000613060 RGPD3A6NKT7 1758 aaPredicted RBP9.64□□□□□ -0.87
SLC6A6-204ENST00000613060 RP1P56715 2156 aa9.64□□□□□ -0.87
SLC6A6-204ENST00000613060 TRAV3A0A0B4J244 114 aa9.64□□□□□ -0.87
SLC6A6-204ENST00000613060 PLA2G1BP04054 148 aaKnown RBP9.64□□□□□ -0.87
SLC6A6-204ENST00000613060 VPREB3Q9UKI3 123 aa9.64□□□□□ -0.87
SLC6A6-204ENST00000613060 GTF3C1Q12789 2109 aa9.63□□□□□ -0.87
SLC6A6-204ENST00000613060 HILS1P60008 231 aa9.63□□□□□ -0.87
SLC6A6-204ENST00000613060 YPEL3P61236 119 aaPredicted RBP9.63□□□□□ -0.87
SLC6A6-204ENST00000613060 KIR3DS1Q14943 382 aa9.63□□□□□ -0.87
SLC6A6-204ENST00000613060 GGNQ86UU5 652 aa9.63□□□□□ -0.87
SLC6A6-204ENST00000613060 PATJQ8NI35 1801 aa9.63□□□□□ -0.87
SLC6A6-204ENST00000613060 SDHAF1A6NFY7 115 aa9.63□□□□□ -0.87
SLC6A6-204ENST00000613060 PIKFYVEQ9Y2I7 2098 aa9.63□□□□□ -0.87
SLC6A6-204ENST00000613060 SH2D6Q7Z4S9 175 aa9.63□□□□□ -0.87
SLC6A6-204ENST00000613060 PAQR4Q8N4S7 273 aaPredicted RBP9.63□□□□□ -0.87
SLC6A6-204ENST00000613060 X6R8D5 127 aa9.63□□□□□ -0.87
SLC6A6-204ENST00000613060 TRBV20-1A0A075B6N2 111 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms