RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 METTL26Q96S19 204 aa8.72□□□□□ -1.01
FAM3A-221ENST00000612856 PRSS22Q9GZN4 317 aa8.72□□□□□ -1.01
FAM3A-221ENST00000612856 TMEM167BQ9NRX6 74 aa8.72□□□□□ -1.01
FAM3A-221ENST00000612856 NBEAL1Q6ZS30 2694 aa8.72□□□□□ -1.01
FAM3A-221ENST00000612856 A0A0G2JLM5 398 aa8.72□□□□□ -1.01
FAM3A-221ENST00000612856 VDAC2P45880 294 aaPredicted RBP8.72□□□□□ -1.01
FAM3A-221ENST00000612856 ZNF134P52741 427 aa8.72□□□□□ -1.01
FAM3A-221ENST00000612856 IGFL4Q6B9Z1 124 aa8.72□□□□□ -1.01
FAM3A-221ENST00000612856 C3orf56Q8N813 242 aa8.72□□□□□ -1.01
FAM3A-221ENST00000612856 A0A1W2PRE2 83 aa8.72□□□□□ -1.01
FAM3A-221ENST00000612856 TCRBV4S1A1TA0A5B7 111 aa8.72□□□□□ -1.01
FAM3A-221ENST00000612856 RELNP78509 3460 aa8.72□□□□□ -1.01
FAM3A-221ENST00000612856 BUB1B-PAK6H3BSN5 160 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 HTN3P15516 51 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 EFNB3Q15768 340 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 DEFB121Q5J5C9 76 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 ASCL4Q6XD76 172 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 TPSG1Q9NRR2 321 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 SIGLEC9Q9Y336 463 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 CHTOPQ9Y3Y2 248 aaKnown RBP8.71□□□□□ -1.01
FAM3A-221ENST00000612856 FAM90A26D6RGX4 464 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 IGHV4-38-2P0DP08 117 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 CTRLP40313 264 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 C15orf32Q32M92 178 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 FAM162BQ5T6X4 162 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 TREML4Q6UXN2 200 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 ZNF295-AS1Q8N0V1 137 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 NABP2Q9BQ15 211 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 ST20Q9HBF5 79 aa8.71□□□□□ -1.01
FAM3A-221ENST00000612856 CD5LO43866 347 aa8.71□□□□□ -1.02
FAM3A-221ENST00000612856 STAG3L2P0CL84 134 aa8.71□□□□□ -1.02
FAM3A-221ENST00000612856 STAG3L3P0CL85 134 aa8.71□□□□□ -1.02
FAM3A-221ENST00000612856 PRSS57Q6UWY2 283 aa8.71□□□□□ -1.02
FAM3A-221ENST00000612856 TXNDC17Q9BRA2 123 aa8.71□□□□□ -1.02
FAM3A-221ENST00000612856 WDR83OSQ9Y284 106 aa8.71□□□□□ -1.02
FAM3A-221ENST00000612856 SYS1-DBNDD2H3BUS1 97 aa8.71□□□□□ -1.02
FAM3A-221ENST00000612856 IGHV4-59P01825 116 aa8.71□□□□□ -1.02
FAM3A-221ENST00000612856 RAB9AP51151 201 aa8.71□□□□□ -1.02
FAM3A-221ENST00000612856 KRTAP10-9P60411 292 aa8.71□□□□□ -1.02
FAM3A-221ENST00000612856 HIST1H1AQ02539 215 aaPredicted RBP8.71□□□□□ -1.02
FAM3A-221ENST00000612856 FAM71F2Q6NXP2 309 aa8.71□□□□□ -1.02
FAM3A-221ENST00000612856 TSSC4Q9Y5U2 329 aaPredicted RBP8.71□□□□□ -1.02
FAM3A-221ENST00000612856 V9GYV3 84 aa8.71□□□□□ -1.02
FAM3A-221ENST00000612856 P01737 135 aa8.7□□□□□ -1.02
FAM3A-221ENST00000612856 PRTN3P24158 256 aa8.7□□□□□ -1.02
FAM3A-221ENST00000612856 ASCL2Q99929 193 aa8.7□□□□□ -1.02
FAM3A-221ENST00000612856 IZUMO1RA6ND01 250 aa8.7□□□□□ -1.02
FAM3A-221ENST00000612856 LINC00305Q7Z4B0 112 aa8.7□□□□□ -1.02
FAM3A-221ENST00000612856 C11orf53Q8IXP5 236 aa8.7□□□□□ -1.02
FAM3A-221ENST00000612856 GGTLC1Q9BX51 225 aa8.7□□□□□ -1.02
FAM3A-221ENST00000612856 KIR3DS1Q14943 382 aa8.7□□□□□ -1.02
FAM3A-221ENST00000612856 GUSBP1Q15486 140 aa8.7□□□□□ -1.02
FAM3A-221ENST00000612856 SRSF7Q16629 238 aaKnown RBP eCLIP8.7□□□□□ -1.02
FAM3A-221ENST00000612856 TMEM249Q2WGJ8 235 aa8.7□□□□□ -1.02
FAM3A-221ENST00000612856 DEFB113Q30KQ7 82 aa8.7□□□□□ -1.02
FAM3A-221ENST00000612856 KRTAP27-1Q3LI81 207 aa8.7□□□□□ -1.02
FAM3A-221ENST00000612856 DEFB125Q8N687 156 aa8.7□□□□□ -1.02
FAM3A-221ENST00000612856 FAM110DQ8TAY7 271 aaPredicted RBP8.7□□□□□ -1.02
FAM3A-221ENST00000612856 DEFB104AQ8WTQ1 72 aa8.7□□□□□ -1.02
FAM3A-221ENST00000612856 SLC25A16P16260 332 aa8.69□□□□□ -1.02
FAM3A-221ENST00000612856 GNG5P63218 68 aa8.69□□□□□ -1.02
FAM3A-221ENST00000612856 FAM120AOSQ5T036 256 aa8.69□□□□□ -1.02
FAM3A-221ENST00000612856 C18orf15Q96N68 181 aa8.69□□□□□ -1.02
FAM3A-221ENST00000612856 SRSF8Q9BRL6 282 aaKnown RBP8.69□□□□□ -1.02
FAM3A-221ENST00000612856 KALRNO60229 2985 aa8.69□□□□□ -1.02
FAM3A-221ENST00000612856 UPK2O00526 184 aa8.69□□□□□ -1.02
FAM3A-221ENST00000612856 GOLT1AQ6ZVE7 132 aa8.69□□□□□ -1.02
FAM3A-221ENST00000612856 OR52E5Q8NH55 327 aa8.69□□□□□ -1.02
FAM3A-221ENST00000612856 MGST2Q99735 147 aa8.69□□□□□ -1.02
FAM3A-221ENST00000612856 MBNL3Q9NUK0 354 aaKnown RBP8.69□□□□□ -1.02
FAM3A-221ENST00000612856 SOX21Q9Y651 276 aaPredicted RBP8.69□□□□□ -1.02
FAM3A-221ENST00000612856 TRAV9-1A0A075B6T8 112 aa8.69□□□□□ -1.02
FAM3A-221ENST00000612856 TRAV5A0A0B4J249 113 aa8.69□□□□□ -1.02
FAM3A-221ENST00000612856 HOXA3O43365 443 aaPredicted RBP8.69□□□□□ -1.02
FAM3A-221ENST00000612856 KLHL30-AS1Q8NEE0 82 aa8.69□□□□□ -1.02
FAM3A-221ENST00000612856 PRSS1P07477 247 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 DAZAP2Q15038 168 aaPredicted RBP8.68□□□□□ -1.02
FAM3A-221ENST00000612856 TMEM155Q4W5P6 130 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 TMEM177Q53S58 311 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 TEX45Q8NA69 505 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 EEF1AKMT3Q96AZ1 226 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 IFI27L2Q9H2X8 130 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 DSCAML1Q8TD84 2053 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 TEX48A0A1B0GUV7 120 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 MPDU1O75352 247 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 SMIM17P0DL12 118 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 DEFB112Q30KQ8 113 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 NUP35Q8NFH5 326 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 AP5S1Q9NUS5 200 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 COL6A5A8TX70 2615 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 APOHP02749 345 aaPredicted RBP8.68□□□□□ -1.02
FAM3A-221ENST00000612856 PYYP10082 97 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 BLCAPP62952 87 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 FAM169BQ8N8A8 192 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 OSTCQ9NRP0 149 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 NHP2Q9NX24 153 aaKnown RBP8.68□□□□□ -1.02
FAM3A-221ENST00000612856 ZNF257Q9Y2Q1 563 aa8.68□□□□□ -1.02
FAM3A-221ENST00000612856 TRAV41A0A0B4J266 112 aa8.67□□□□□ -1.02
FAM3A-221ENST00000612856 PSMB11A5LHX3 300 aa8.67□□□□□ -1.02
FAM3A-221ENST00000612856 C15orf62A8K5M9 175 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms