RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 LEPP41159 167 aa6.88□□□□□ -1.31
LIG4-204ENST00000611712 RPL24P83731 157 aaKnown RBP6.88□□□□□ -1.31
LIG4-204ENST00000611712 EBLN2Q6P2I7 272 aa6.88□□□□□ -1.31
LIG4-204ENST00000611712 Q8NA96 180 aa6.88□□□□□ -1.31
LIG4-204ENST00000611712 MRPS16Q9Y3D3 137 aaKnown RBP6.88□□□□□ -1.31
LIG4-204ENST00000611712 I3L2K1 104 aa6.88□□□□□ -1.31
LIG4-204ENST00000611712 NPSP0C0P6 89 aa6.88□□□□□ -1.31
LIG4-204ENST00000611712 FOXC2Q99958 501 aa6.88□□□□□ -1.31
LIG4-204ENST00000611712 MS4A6AQ9H2W1 248 aa6.88□□□□□ -1.31
LIG4-204ENST00000611712 PEF1Q9UBV8 284 aaKnown RBP6.88□□□□□ -1.31
LIG4-204ENST00000611712 TP53TG3Q9ULZ0 132 aa6.88□□□□□ -1.31
LIG4-204ENST00000611712 A0A087X0K7 114 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 HAX1O00165 279 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 FBLN7Q53RD9 439 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 SCGB1D4Q6XE38 83 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 PIMREGQ9BSJ6 248 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 K7EIM0 57 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 PPBPP02775 128 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 KLF5Q13887 457 aaPredicted RBP6.87□□□□□ -1.31
LIG4-204ENST00000611712 STPG4Q8N801 248 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 ACACBO00763 2458 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 TEX22C9J3V5 150 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 K7ERU9 68 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 CRYGCP07315 174 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 HTN1P15515 57 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 EFNA4P52798 201 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 GTSF1Q8WW33 167 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 KLF12Q9Y4X4 402 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 TRAV8-6A0A0B4J262 113 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 SAA4P35542 130 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 PLP1P60201 277 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 ERCC8Q13216 396 aa6.87□□□□□ -1.31
LIG4-204ENST00000611712 CACNA1AO00555 2505 aa6.86□□□□□ -1.31
LIG4-204ENST00000611712 ID1P41134 155 aa6.86□□□□□ -1.31
LIG4-204ENST00000611712 NBL1P41271 181 aa6.86□□□□□ -1.31
LIG4-204ENST00000611712 NDPQ00604 133 aa6.86□□□□□ -1.31
LIG4-204ENST00000611712 FAM208BQ5VWN6 2430 aa6.86□□□□□ -1.31
LIG4-204ENST00000611712 CFAP54Q96N23 3096 aa6.86□□□□□ -1.31
LIG4-204ENST00000611712 BPESC1Q9GZL8 116 aa6.86□□□□□ -1.31
LIG4-204ENST00000611712 NXT2Q9NPJ8 142 aaKnown RBP6.86□□□□□ -1.31
LIG4-204ENST00000611712 PAX8Q06710 450 aa6.86□□□□□ -1.31
LIG4-204ENST00000611712 GLMPQ8WWB7 406 aa6.86□□□□□ -1.31
LIG4-204ENST00000611712 PRR25Q96S07 402 aa6.86□□□□□ -1.31
LIG4-204ENST00000611712 MSRB2Q9Y3D2 182 aa6.86□□□□□ -1.31
LIG4-204ENST00000611712 TRAV40A0A0B4J280 105 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 G3V318 75 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 ATP6V0E1O15342 81 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 NDUFS7O75251 213 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 ATP5LO75964 103 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 PCP4P48539 62 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 FAM104BQ5XKR9 115 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 LINC00322Q6ZN03 302 aaPredicted RBP6.85□□□□□ -1.31
LIG4-204ENST00000611712 RNF182Q8N6D2 247 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 C7orf69Q9H7B7 122 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 TRAV41A0A0B4J266 112 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 J3QR89 54 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 FABP2P12104 132 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 SRSF9Q13242 221 aaKnown RBP eCLIP6.85□□□□□ -1.31
LIG4-204ENST00000611712 FAM106AQ4KMX7 169 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 SIGLEC15Q6ZMC9 328 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 LINC00173Q6ZV60 143 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 ZNF502Q8TBZ5 544 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 GDF5OSQ5U4N7 250 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 BRD3OSQ6XYD6 125 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 ORAOV1Q8WV07 137 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 CCL19Q99731 98 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 SELENOKQ9Y6D0 94 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 PCSK5Q92824 1860 aa6.85□□□□□ -1.31
LIG4-204ENST00000611712 NPFFO15130 113 aa6.84□□□□□ -1.31
LIG4-204ENST00000611712 IGKV3-20P01619 116 aa6.84□□□□□ -1.31
LIG4-204ENST00000611712 ASIPP42127 132 aa6.84□□□□□ -1.31
LIG4-204ENST00000611712 OR11H6Q8NGC7 330 aa6.84□□□□□ -1.31
LIG4-204ENST00000611712 COX11Q9Y6N1 276 aa6.84□□□□□ -1.31
LIG4-204ENST00000611712 H3BVH4 76 aa6.84□□□□□ -1.31
LIG4-204ENST00000611712 HLA-DMBP28068 263 aa6.84□□□□□ -1.31
LIG4-204ENST00000611712 FAM120AOSQ5T036 256 aa6.84□□□□□ -1.31
LIG4-204ENST00000611712 AMMECR1LQ6DCA0 310 aa6.84□□□□□ -1.31
LIG4-204ENST00000611712 HIST1H4GQ99525 98 aa6.84□□□□□ -1.31
LIG4-204ENST00000611712 VGLL1Q99990 258 aa6.84□□□□□ -1.31
LIG4-204ENST00000611712 ANKRD11Q6UB99 2663 aaPredicted RBP6.84□□□□□ -1.31
LIG4-204ENST00000611712 H3BUT2 72 aa6.84□□□□□ -1.31
LIG4-204ENST00000611712 RNASE4P34096 147 aaKnown RBP6.84□□□□□ -1.31
LIG4-204ENST00000611712 UBE2V1Q13404 147 aa6.84□□□□□ -1.31
LIG4-204ENST00000611712 MBD6Q96DN6 1003 aa6.84□□□□□ -1.31
LIG4-204ENST00000611712 NCOR2Q9Y618 2525 aa6.84□□□□□ -1.31
LIG4-204ENST00000611712 UBE2E1P51965 193 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 Q6ZVH6 145 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 MOB4Q9Y3A3 225 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 PSMB11A5LHX3 300 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 HERVK_113P61574 105 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 MRPL51Q4U2R6 128 aaKnown RBP6.83□□□□□ -1.32
LIG4-204ENST00000611712 FAM159AQ6UWV7 190 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 FAM110DQ8TAY7 271 aaPredicted RBP6.83□□□□□ -1.32
LIG4-204ENST00000611712 SIGLEC8Q9NYZ4 499 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 ARHGAP32A7KAX9 2087 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 CSPG4Q6UVK1 2322 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 TNRC6BQ9UPQ9 1833 aaKnown RBP6.83□□□□□ -1.32
LIG4-204ENST00000611712 REV3LO60673 3130 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 FAM74A4Q5TZK3 123 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms