RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 LINC00612Q8N6U2 182 aa9.3□□□□□ -0.92
POLR2J3-219ENST00000608621 RXFP4Q8TDU9 374 aa9.3□□□□□ -0.92
POLR2J3-219ENST00000608621 MITD1Q8WV92 249 aa9.3□□□□□ -0.92
POLR2J3-219ENST00000608621 SAT2Q96F10 170 aaPredicted RBP9.3□□□□□ -0.92
POLR2J3-219ENST00000608621 SDHCQ99643 169 aaPredicted RBP9.3□□□□□ -0.92
POLR2J3-219ENST00000608621 RBM38Q9H0Z9 239 aaKnown RBP9.3□□□□□ -0.92
POLR2J3-219ENST00000608621 DNAJC4Q9NNZ3 241 aa9.3□□□□□ -0.92
POLR2J3-219ENST00000608621 PXMP4Q9Y6I8 212 aa9.3□□□□□ -0.92
POLR2J3-219ENST00000608621 HSPG2P98160 4391 aa9.3□□□□□ -0.92
POLR2J3-219ENST00000608621 ABCA13Q86UQ4 5058 aa9.3□□□□□ -0.92
POLR2J3-219ENST00000608621 TRAV5A0A0B4J249 113 aa9.29□□□□□ -0.92
POLR2J3-219ENST00000608621 TRAV12-3A0A0B4J271 114 aa9.29□□□□□ -0.92
POLR2J3-219ENST00000608621 SNURFLB1AK76 121 aa9.29□□□□□ -0.92
POLR2J3-219ENST00000608621 L7N2F9 121 aa9.29□□□□□ -0.92
POLR2J3-219ENST00000608621 CCSO14618 274 aa9.29□□□□□ -0.92
POLR2J3-219ENST00000608621 CT45A10P0DMU9 189 aa9.29□□□□□ -0.92
POLR2J3-219ENST00000608621 IGLC2P0DOY2 106 aa9.29□□□□□ -0.92
POLR2J3-219ENST00000608621 M6PRP20645 277 aa9.29□□□□□ -0.92
POLR2J3-219ENST00000608621 HOXA5P20719 270 aa9.29□□□□□ -0.92
POLR2J3-219ENST00000608621 CAMLGP49069 296 aa9.29□□□□□ -0.92
POLR2J3-219ENST00000608621 VAMP2P63027 116 aa9.29□□□□□ -0.92
POLR2J3-219ENST00000608621 ESRGQ1W209 222 aa9.29□□□□□ -0.92
POLR2J3-219ENST00000608621 Q6ZRG5 221 aa9.29□□□□□ -0.92
POLR2J3-219ENST00000608621 LRP1BQ9NZR2 4599 aa9.29□□□□□ -0.92
POLR2J3-219ENST00000608621 RLN2P04090 185 aa9.28□□□□□ -0.92
POLR2J3-219ENST00000608621 BCAP31P51572 246 aa9.28□□□□□ -0.92
POLR2J3-219ENST00000608621 CNPY1Q3B7I2 92 aa9.28□□□□□ -0.92
POLR2J3-219ENST00000608621 MIC13Q5XKP0 118 aa9.28□□□□□ -0.92
POLR2J3-219ENST00000608621 NRARPQ7Z6K4 114 aa9.28□□□□□ -0.92
POLR2J3-219ENST00000608621 MAPKAPK5-AS1Q8N8E1 139 aa9.28□□□□□ -0.92
POLR2J3-219ENST00000608621 ZNF431Q8TF32 576 aaPredicted RBP9.28□□□□□ -0.92
POLR2J3-219ENST00000608621 ZNF503Q96F45 646 aa9.28□□□□□ -0.92
POLR2J3-219ENST00000608621 LSM5Q9Y4Y9 91 aaKnown RBP9.28□□□□□ -0.92
POLR2J3-219ENST00000608621 FAM24AA6NFZ4 105 aa9.27□□□□□ -0.93
POLR2J3-219ENST00000608621 CST7O76096 145 aa9.27□□□□□ -0.93
POLR2J3-219ENST00000608621 LEPP41159 167 aa9.27□□□□□ -0.93
POLR2J3-219ENST00000608621 RAB31Q13636 194 aa9.27□□□□□ -0.93
POLR2J3-219ENST00000608621 ZNF846Q147U1 533 aa9.27□□□□□ -0.93
POLR2J3-219ENST00000608621 SPATA12Q7Z6I5 190 aa9.27□□□□□ -0.93
POLR2J3-219ENST00000608621 KRTAP1-5Q9BYS1 174 aa9.27□□□□□ -0.93
POLR2J3-219ENST00000608621 FAM25EA8MYX2 175 aa9.26□□□□□ -0.93
POLR2J3-219ENST00000608621 NPIPB6E9PJ23 425 aa9.26□□□□□ -0.93
POLR2J3-219ENST00000608621 IL7P13232 177 aa9.26□□□□□ -0.93
POLR2J3-219ENST00000608621 CAV2P51636 162 aa9.26□□□□□ -0.93
POLR2J3-219ENST00000608621 GUK1Q16774 197 aa9.26□□□□□ -0.93
POLR2J3-219ENST00000608621 TTC32Q5I0X7 151 aa9.26□□□□□ -0.93
POLR2J3-219ENST00000608621 Q6ZTI0 123 aa9.26□□□□□ -0.93
POLR2J3-219ENST00000608621 OR1L4Q8NGR5 311 aa9.26□□□□□ -0.93
POLR2J3-219ENST00000608621 ODF3Q96PU9 254 aa9.26□□□□□ -0.93
POLR2J3-219ENST00000608621 PYGO2Q9BRQ0 406 aa9.26□□□□□ -0.93
POLR2J3-219ENST00000608621 Q9H3A6 140 aa9.26□□□□□ -0.93
POLR2J3-219ENST00000608621 ZNF586Q9NXT0 402 aa9.26□□□□□ -0.93
POLR2J3-219ENST00000608621 H3BNG1 76 aa9.25□□□□□ -0.93
POLR2J3-219ENST00000608621 PLA2G10O15496 165 aa9.25□□□□□ -0.93
POLR2J3-219ENST00000608621 DAZ2Q13117 558 aaKnown RBP9.25□□□□□ -0.93
POLR2J3-219ENST00000608621 ERCC8Q13216 396 aa9.25□□□□□ -0.93
POLR2J3-219ENST00000608621 UPK3BQ9BT76 320 aa9.25□□□□□ -0.93
POLR2J3-219ENST00000608621 C20orf85Q9H1P6 137 aa9.25□□□□□ -0.93
POLR2J3-219ENST00000608621 TMPRSS5Q9H3S3 457 aa9.25□□□□□ -0.93
POLR2J3-219ENST00000608621 C11orf1Q9H5F2 150 aa9.25□□□□□ -0.93
POLR2J3-219ENST00000608621 UQCC1Q9NVA1 299 aa9.25□□□□□ -0.93
POLR2J3-219ENST00000608621 WDR83OSQ9Y284 106 aa9.25□□□□□ -0.93
POLR2J3-219ENST00000608621 MRPS16Q9Y3D3 137 aaKnown RBP9.25□□□□□ -0.93
POLR2J3-219ENST00000608621 C5orf51A6NDU8 294 aa9.24□□□□□ -0.93
POLR2J3-219ENST00000608621 M0R3E3 92 aa9.24□□□□□ -0.93
POLR2J3-219ENST00000608621 SLC25A5P05141 298 aaKnown RBP9.24□□□□□ -0.93
POLR2J3-219ENST00000608621 RPL29P47914 159 aaKnown RBP9.24□□□□□ -0.93
POLR2J3-219ENST00000608621 C12orf45Q8N5I9 185 aaPredicted RBP9.24□□□□□ -0.93
POLR2J3-219ENST00000608621 PFDN5Q99471 154 aa9.24□□□□□ -0.93
POLR2J3-219ENST00000608621 GSN-AS1Q9NRJ2 163 aa9.24□□□□□ -0.93
POLR2J3-219ENST00000608621 SLC39A9Q9NUM3 307 aa9.24□□□□□ -0.93
POLR2J3-219ENST00000608621 TRBV19A0A075B6N1 114 aa9.23□□□□□ -0.93
POLR2J3-219ENST00000608621 TRAV6A0A075B6T7 132 aa9.23□□□□□ -0.93
POLR2J3-219ENST00000608621 A0A1W2PPQ1 181 aa9.23□□□□□ -0.93
POLR2J3-219ENST00000608621 C7orf71A4D174 169 aa9.23□□□□□ -0.93
POLR2J3-219ENST00000608621 ZNF253O75346 499 aa9.23□□□□□ -0.93
POLR2J3-219ENST00000608621 TCRBP04435 133 aa9.23□□□□□ -0.93
POLR2J3-219ENST00000608621 KRTAP10-2P60368 255 aa9.23□□□□□ -0.93
POLR2J3-219ENST00000608621 BAXQ07812 192 aa9.23□□□□□ -0.93
POLR2J3-219ENST00000608621 VSIG2Q96IQ7 327 aa9.23□□□□□ -0.93
POLR2J3-219ENST00000608621 C2orf50Q96LR7 162 aa9.23□□□□□ -0.93
POLR2J3-219ENST00000608621 LINC00477Q96M19 166 aa9.23□□□□□ -0.93
POLR2J3-219ENST00000608621 SEC22CQ9BRL7 303 aa9.23□□□□□ -0.93
POLR2J3-219ENST00000608621 DNAH5Q8TE73 4624 aa9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 TRGV2A0A075B6R0 118 aa9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 A0A096LPF7 62 aa9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 LYRM1O43325 122 aa9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 ZNF324O75467 553 aaPredicted RBP9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 NDUFB4O95168 129 aa9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 HIST1H1EP10412 219 aaKnown RBP9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 BTF3P20290 206 aaKnown RBP9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 PVALBP20472 110 aaPredicted RBP9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 S100A11P31949 105 aa9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 RNASE4P34096 147 aaKnown RBP9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 SULT1A1P50225 295 aa9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 CD300CQ08708 224 aa9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 VWC2Q2TAL6 325 aa9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 Q8N1X5 172 aa9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 C11orf72Q8NBR9 251 aa9.22□□□□□ -0.93
POLR2J3-219ENST00000608621 MRPL53Q96EL3 112 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms