RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 IGKV2-40A0A087WW87 121 aaPredicted RBP11.64□□□□□ -0.55
CCDC12-211ENST00000604367 FAM223BA6NKX1 122 aa11.64□□□□□ -0.55
CCDC12-211ENST00000604367 M0QZK8 103 aa11.64□□□□□ -0.55
CCDC12-211ENST00000604367 IGKV2D-40P01614 121 aaPredicted RBP11.64□□□□□ -0.55
CCDC12-211ENST00000604367 TRBV12-3P01733 135 aa11.64□□□□□ -0.55
CCDC12-211ENST00000604367 IGHV3-11P01762 117 aa11.64□□□□□ -0.55
CCDC12-211ENST00000604367 MT-ND6P03923 174 aa11.64□□□□□ -0.55
CCDC12-211ENST00000604367 GZMBP10144 247 aa11.64□□□□□ -0.55
CCDC12-211ENST00000604367 PPIFP30405 207 aaKnown RBP11.64□□□□□ -0.55
CCDC12-211ENST00000604367 FAM223AQ8IWN6 122 aa11.64□□□□□ -0.55
CCDC12-211ENST00000604367 GTSF1Q8WW33 167 aa11.64□□□□□ -0.55
CCDC12-211ENST00000604367 KLK15Q9H2R5 256 aa11.64□□□□□ -0.55
CCDC12-211ENST00000604367 ZNF492Q9P255 531 aa11.64□□□□□ -0.55
CCDC12-211ENST00000604367 TENM4Q6N022 2769 aa11.63□□□□□ -0.55
CCDC12-211ENST00000604367 DOPEY2Q9Y3R5 2298 aa11.63□□□□□ -0.55
CCDC12-211ENST00000604367 PF4V1P10720 104 aa11.63□□□□□ -0.55
CCDC12-211ENST00000604367 S100A7P31151 101 aa11.63□□□□□ -0.55
CCDC12-211ENST00000604367 Q5PR19 223 aa11.63□□□□□ -0.55
CCDC12-211ENST00000604367 ZNF705FA8MVS1 300 aaPredicted RBP11.62□□□□□ -0.55
CCDC12-211ENST00000604367 A8MWL6 223 aa11.62□□□□□ -0.55
CCDC12-211ENST00000604367 F2Z2F3 143 aa11.62□□□□□ -0.55
CCDC12-211ENST00000604367 DEFB113Q30KQ7 82 aa11.62□□□□□ -0.55
CCDC12-211ENST00000604367 C8orf49Q96NF6 230 aa11.62□□□□□ -0.55
CCDC12-211ENST00000604367 METTL26Q96S19 204 aa11.62□□□□□ -0.55
CCDC12-211ENST00000604367 TP53TG3Q9ULZ0 132 aa11.62□□□□□ -0.55
CCDC12-211ENST00000604367 ZFP30Q9Y2G7 519 aa11.62□□□□□ -0.55
CCDC12-211ENST00000604367 CHEK1O14757 476 aa11.62□□□□□ -0.55
CCDC12-211ENST00000604367 HLA-DQA1P01909 254 aa11.62□□□□□ -0.55
CCDC12-211ENST00000604367 ARL3P36405 182 aa11.62□□□□□ -0.55
CCDC12-211ENST00000604367 OR2D3Q8NGH3 330 aa11.62□□□□□ -0.55
CCDC12-211ENST00000604367 PGLYRP4Q96LB8 373 aa11.62□□□□□ -0.55
CCDC12-211ENST00000604367 TRBV6-1A0A0K0K1D8 114 aa11.61□□□□□ -0.55
CCDC12-211ENST00000604367 LOXL1Q08397 574 aaPredicted RBP11.61□□□□□ -0.55
CCDC12-211ENST00000604367 SLAQ13239 276 aa11.61□□□□□ -0.55
CCDC12-211ENST00000604367 COX19Q49B96 90 aa11.61□□□□□ -0.55
CCDC12-211ENST00000604367 GDF5OSQ5U4N7 250 aa11.61□□□□□ -0.55
CCDC12-211ENST00000604367 BAGE3Q86Y29 109 aa11.61□□□□□ -0.55
CCDC12-211ENST00000604367 TMEM18Q96B42 140 aa11.61□□□□□ -0.55
CCDC12-211ENST00000604367 CREBBPQ92793 2442 aa11.61□□□□□ -0.55
CCDC12-211ENST00000604367 APCP25054 2843 aa11.61□□□□□ -0.55
CCDC12-211ENST00000604367 RNF182Q8N6D2 247 aa11.61□□□□□ -0.55
CCDC12-211ENST00000604367 SSBP4Q9BWG4 385 aaPredicted RBP11.61□□□□□ -0.55
CCDC12-211ENST00000604367 ZNF469Q96JG9 3925 aaPredicted RBP11.61□□□□□ -0.55
CCDC12-211ENST00000604367 IGHG4P01861 327 aa11.6□□□□□ -0.55
CCDC12-211ENST00000604367 APCSP02743 223 aa11.6□□□□□ -0.55
CCDC12-211ENST00000604367 CRIP1P50238 77 aa11.6□□□□□ -0.55
CCDC12-211ENST00000604367 RAB9AP51151 201 aa11.6□□□□□ -0.55
CCDC12-211ENST00000604367 CT83Q5H943 113 aa11.6□□□□□ -0.55
CCDC12-211ENST00000604367 TMEM190Q8WZ59 177 aa11.6□□□□□ -0.55
CCDC12-211ENST00000604367 CR1P17927 2039 aa11.6□□□□□ -0.55
CCDC12-211ENST00000604367 NPIPB6E9PJ23 425 aa11.6□□□□□ -0.55
CCDC12-211ENST00000604367 J3QLI3 93 aa11.6□□□□□ -0.55
CCDC12-211ENST00000604367 SERF1AO75920 110 aa11.6□□□□□ -0.55
CCDC12-211ENST00000604367 IGHV4-31P0DP07 118 aa11.6□□□□□ -0.55
CCDC12-211ENST00000604367 SRIP30626 198 aa11.6□□□□□ -0.55
CCDC12-211ENST00000604367 Q8TAT8 98 aa11.6□□□□□ -0.55
CCDC12-211ENST00000604367 LCN12Q6JVE5 192 aa11.59□□□□□ -0.55
CCDC12-211ENST00000604367 UNQ9165/PRO28630Q6UXU0 137 aa11.59□□□□□ -0.55
CCDC12-211ENST00000604367 Q96MF0 132 aa11.59□□□□□ -0.55
CCDC12-211ENST00000604367 VGLL1Q99990 258 aa11.59□□□□□ -0.55
CCDC12-211ENST00000604367 TEX15Q9BXT5 2789 aa11.59□□□□□ -0.55
CCDC12-211ENST00000604367 CT45A10P0DMU9 189 aa11.59□□□□□ -0.55
CCDC12-211ENST00000604367 LINC00310P59036 64 aa11.59□□□□□ -0.55
CCDC12-211ENST00000604367 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.59□□□□□ -0.55
CCDC12-211ENST00000604367 WIPF2Q8TF74 440 aaPredicted RBP11.59□□□□□ -0.55
CCDC12-211ENST00000604367 BEX4Q9NWD9 120 aaPredicted RBP11.59□□□□□ -0.55
CCDC12-211ENST00000604367 HIST2H2BCQ6DN03 193 aa11.58□□□□□ -0.56
CCDC12-211ENST00000604367 RASL11AQ6T310 242 aa11.58□□□□□ -0.56
CCDC12-211ENST00000604367 OR5R1Q8NH85 324 aa11.58□□□□□ -0.56
CCDC12-211ENST00000604367 HELZ2Q9BYK8 2649 aaKnown RBP11.58□□□□□ -0.56
CCDC12-211ENST00000604367 MXRA5Q9NR99 2828 aa11.58□□□□□ -0.56
CCDC12-211ENST00000604367 SERTM2A0A1B0GWG4 89 aa11.58□□□□□ -0.56
CCDC12-211ENST00000604367 ZNF253O75346 499 aa11.58□□□□□ -0.56
CCDC12-211ENST00000604367 G0S2P27469 103 aa11.58□□□□□ -0.56
CCDC12-211ENST00000604367 RBPMS2Q6ZRY4 209 aaKnown RBP11.58□□□□□ -0.56
CCDC12-211ENST00000604367 USMG5Q96IX5 58 aa11.58□□□□□ -0.56
CCDC12-211ENST00000604367 PRAC2D3DTV9 90 aa11.57□□□□□ -0.56
CCDC12-211ENST00000604367 HBBP68871 147 aa11.57□□□□□ -0.56
CCDC12-211ENST00000604367 Q0VG73 95 aa11.57□□□□□ -0.56
CCDC12-211ENST00000604367 OR4X2Q8NGF9 303 aa11.57□□□□□ -0.56
CCDC12-211ENST00000604367 GFRA4Q9GZZ7 299 aa11.57□□□□□ -0.56
CCDC12-211ENST00000604367 PRRC2AP48634 2157 aaKnown RBP11.57□□□□□ -0.56
CCDC12-211ENST00000604367 A0A1B0GXF2 115 aa11.57□□□□□ -0.56
CCDC12-211ENST00000604367 H3BUA1 57 aa11.57□□□□□ -0.56
CCDC12-211ENST00000604367 ATP5L2Q7Z4Y8 100 aa11.57□□□□□ -0.56
CCDC12-211ENST00000604367 OR4B1Q8NGF8 309 aa11.57□□□□□ -0.56
CCDC12-211ENST00000604367 PRR25Q96S07 402 aa11.57□□□□□ -0.56
CCDC12-211ENST00000604367 ATP6V0BQ99437 205 aa11.57□□□□□ -0.56
CCDC12-211ENST00000604367 A0A087X0K7 114 aa11.56□□□□□ -0.56
CCDC12-211ENST00000604367 TMSB15BA0A087X1C1 80 aa11.56□□□□□ -0.56
CCDC12-211ENST00000604367 IGLV1-40P01703 118 aa11.56□□□□□ -0.56
CCDC12-211ENST00000604367 ERCC8Q13216 396 aa11.56□□□□□ -0.56
CCDC12-211ENST00000604367 JOSD1Q15040 202 aaPredicted RBP11.56□□□□□ -0.56
CCDC12-211ENST00000604367 C1orf194Q5T5A4 169 aa11.56□□□□□ -0.56
CCDC12-211ENST00000604367 RCHY1Q96PM5 261 aa11.56□□□□□ -0.56
CCDC12-211ENST00000604367 TPPP3Q9BW30 176 aa11.56□□□□□ -0.56
CCDC12-211ENST00000604367 TLN2Q9Y4G6 2542 aa11.56□□□□□ -0.56
CCDC12-211ENST00000604367 C10orf99Q6UWK7 81 aa11.56□□□□□ -0.56
CCDC12-211ENST00000604367 U3KQE9 123 aa11.56□□□□□ -0.56
CCDC12-211ENST00000604367 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms