RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 ICAM4Q14773 271 aa8.42□□□□□ -1.06
HOMER3-211ENST00000599808 PSG3Q16557 428 aa8.42□□□□□ -1.06
HOMER3-211ENST00000599808 VSIG2Q96IQ7 327 aa8.42□□□□□ -1.06
HOMER3-211ENST00000599808 SEC22CQ9BRL7 303 aa8.42□□□□□ -1.06
HOMER3-211ENST00000599808 SHANK2-AS3Q9BTD1 123 aa8.42□□□□□ -1.06
HOMER3-211ENST00000599808 TMPRSS5Q9H3S3 457 aa8.42□□□□□ -1.06
HOMER3-211ENST00000599808 IFNA5P01569 189 aa8.41□□□□□ -1.06
HOMER3-211ENST00000599808 RPL7P18124 248 aaKnown RBP8.41□□□□□ -1.06
HOMER3-211ENST00000599808 S100A7P31151 101 aa8.41□□□□□ -1.06
HOMER3-211ENST00000599808 RPUSD4Q96CM3 377 aaKnown RBP8.41□□□□□ -1.06
HOMER3-211ENST00000599808 C20orf144Q9BQM9 153 aa8.41□□□□□ -1.06
HOMER3-211ENST00000599808 PARD6GQ9BYG4 376 aaPredicted RBP8.41□□□□□ -1.06
HOMER3-211ENST00000599808 A0A087WTM6 91 aa8.4□□□□□ -1.06
HOMER3-211ENST00000599808 A0A087X0K7 114 aa8.4□□□□□ -1.06
HOMER3-211ENST00000599808 SNURFLB1AK76 121 aa8.4□□□□□ -1.06
HOMER3-211ENST00000599808 C1QBP02746 253 aa8.4□□□□□ -1.06
HOMER3-211ENST00000599808 ANXA3P12429 323 aa8.4□□□□□ -1.06
HOMER3-211ENST00000599808 UBE2MP61081 183 aaKnown RBP8.4□□□□□ -1.06
HOMER3-211ENST00000599808 HAMPP81172 84 aa8.4□□□□□ -1.06
HOMER3-211ENST00000599808 AKR1C1Q04828 323 aa8.4□□□□□ -1.06
HOMER3-211ENST00000599808 ZFP69Q49AA0 526 aa8.4□□□□□ -1.06
HOMER3-211ENST00000599808 GFI1BQ5VTD9 330 aa8.4□□□□□ -1.06
HOMER3-211ENST00000599808 Q6ZTI0 123 aa8.4□□□□□ -1.06
HOMER3-211ENST00000599808 CCDC28AQ8IWP9 274 aa8.4□□□□□ -1.06
HOMER3-211ENST00000599808 ZNF431Q8TF32 576 aaPredicted RBP8.4□□□□□ -1.06
HOMER3-211ENST00000599808 HIGD1AQ9Y241 93 aa8.4□□□□□ -1.06
HOMER3-211ENST00000599808 FAM229AH3BQW9 127 aa8.39□□□□□ -1.07
HOMER3-211ENST00000599808 J3QL48 77 aa8.39□□□□□ -1.07
HOMER3-211ENST00000599808 SSNA1O43805 119 aa8.39□□□□□ -1.07
HOMER3-211ENST00000599808 NXPH4O95158 308 aa8.39□□□□□ -1.07
HOMER3-211ENST00000599808 OR4E1P0C645 316 aa8.39□□□□□ -1.07
HOMER3-211ENST00000599808 RAP2BP61225 183 aa8.39□□□□□ -1.07
HOMER3-211ENST00000599808 SRPXP78539 464 aa8.39□□□□□ -1.07
HOMER3-211ENST00000599808 Q6ZSN1 163 aa8.39□□□□□ -1.07
HOMER3-211ENST00000599808 TMED4Q7Z7H5 227 aa8.39□□□□□ -1.07
HOMER3-211ENST00000599808 LRRC20Q8TCA0 184 aa8.39□□□□□ -1.07
HOMER3-211ENST00000599808 SCGB3A2Q96PL1 93 aa8.39□□□□□ -1.07
HOMER3-211ENST00000599808 UBR4Q5T4S7 5183 aa8.39□□□□□ -1.07
HOMER3-211ENST00000599808 WRBO00258 174 aa8.38□□□□□ -1.07
HOMER3-211ENST00000599808 MRPS12O15235 138 aaKnown RBP8.38□□□□□ -1.07
HOMER3-211ENST00000599808 GIPP09681 153 aaPredicted RBP8.38□□□□□ -1.07
HOMER3-211ENST00000599808 DAZ2Q13117 558 aaKnown RBP8.38□□□□□ -1.07
HOMER3-211ENST00000599808 CYP2G1PQ6ZSU1 146 aa8.38□□□□□ -1.07
HOMER3-211ENST00000599808 ACOT7LQ6ZUV0 252 aa8.38□□□□□ -1.07
HOMER3-211ENST00000599808 ASB13Q8WXK3 278 aa8.38□□□□□ -1.07
HOMER3-211ENST00000599808 CIB3Q96Q77 187 aaPredicted RBP8.38□□□□□ -1.07
HOMER3-211ENST00000599808 DUXBA0A1W2PPF3 345 aa8.37□□□□□ -1.07
HOMER3-211ENST00000599808 PRAC2D3DTV9 90 aa8.37□□□□□ -1.07
HOMER3-211ENST00000599808 H3BP45 60 aa8.37□□□□□ -1.07
HOMER3-211ENST00000599808 SYNGR2O43760 224 aa8.37□□□□□ -1.07
HOMER3-211ENST00000599808 HYPMO75409 117 aa8.37□□□□□ -1.07
HOMER3-211ENST00000599808 MED6O75586 246 aa8.37□□□□□ -1.07
HOMER3-211ENST00000599808 OR5G3P0C626 314 aa8.37□□□□□ -1.07
HOMER3-211ENST00000599808 LINC00869P0C866 280 aa8.37□□□□□ -1.07
HOMER3-211ENST00000599808 GCSHP23434 173 aa8.37□□□□□ -1.07
HOMER3-211ENST00000599808 PLP1P60201 277 aa8.37□□□□□ -1.07
HOMER3-211ENST00000599808 RPP30P78346 268 aaKnown RBP8.37□□□□□ -1.07
HOMER3-211ENST00000599808 C4orf46Q504U0 113 aa8.37□□□□□ -1.07
HOMER3-211ENST00000599808 SPANXN5Q5MJ07 72 aa8.37□□□□□ -1.07
HOMER3-211ENST00000599808 NFE4Q86UQ8 179 aa8.37□□□□□ -1.07
HOMER3-211ENST00000599808 ZNF331Q9NQX6 463 aaPredicted RBP8.37□□□□□ -1.07
HOMER3-211ENST00000599808 MGAT4CQ9UBM8 478 aa8.37□□□□□ -1.07
HOMER3-211ENST00000599808 HMCN2Q8NDA2 5059 aa8.36□□□□□ -1.07
HOMER3-211ENST00000599808 TRAV12-3A0A0B4J271 114 aa8.36□□□□□ -1.07
HOMER3-211ENST00000599808 C9orf170A2RU37 121 aa8.36□□□□□ -1.07
HOMER3-211ENST00000599808 PMS2P5A8MQ11 134 aa8.36□□□□□ -1.07
HOMER3-211ENST00000599808 J3KRW8 73 aa8.36□□□□□ -1.07
HOMER3-211ENST00000599808 SNRPCP09234 159 aaKnown RBP8.36□□□□□ -1.07
HOMER3-211ENST00000599808 NKX2-5P52952 324 aaPredicted RBP8.36□□□□□ -1.07
HOMER3-211ENST00000599808 PPP1R1AQ13522 171 aa8.36□□□□□ -1.07
HOMER3-211ENST00000599808 PATE2Q6UY27 113 aa8.36□□□□□ -1.07
HOMER3-211ENST00000599808 C12orf45Q8N5I9 185 aaPredicted RBP8.36□□□□□ -1.07
HOMER3-211ENST00000599808 MITD1Q8WV92 249 aa8.36□□□□□ -1.07
HOMER3-211ENST00000599808 DNAH8Q96JB1 4490 aa8.35□□□□□ -1.07
HOMER3-211ENST00000599808 TRGV2A0A075B6R0 118 aa8.35□□□□□ -1.07
HOMER3-211ENST00000599808 SMCO3A2RU48 225 aa8.35□□□□□ -1.07
HOMER3-211ENST00000599808 G3V3Q6 166 aa8.35□□□□□ -1.07
HOMER3-211ENST00000599808 SLC25A6P12236 298 aa8.35□□□□□ -1.07
HOMER3-211ENST00000599808 CXCL2P19875 107 aa8.35□□□□□ -1.07
HOMER3-211ENST00000599808 TMEM128Q5BJH2 165 aa8.35□□□□□ -1.07
HOMER3-211ENST00000599808 LCN15Q6UWW0 184 aa8.35□□□□□ -1.07
HOMER3-211ENST00000599808 ZBTB8BQ8NAP8 495 aaPredicted RBP8.35□□□□□ -1.07
HOMER3-211ENST00000599808 HYLS1Q96M11 299 aa8.35□□□□□ -1.07
HOMER3-211ENST00000599808 PYGO2Q9BRQ0 406 aa8.35□□□□□ -1.07
HOMER3-211ENST00000599808 STRAPQ9Y3F4 350 aaKnown RBP8.35□□□□□ -1.07
HOMER3-211ENST00000599808 ICOSQ9Y6W8 199 aa8.35□□□□□ -1.07
HOMER3-211ENST00000599808 PIGBOS1A0A0B4J2F0 54 aa8.34□□□□□ -1.07
HOMER3-211ENST00000599808 SLC17A3O00476 420 aa8.34□□□□□ -1.07
HOMER3-211ENST00000599808 ZNF324O75467 553 aaPredicted RBP8.34□□□□□ -1.07
HOMER3-211ENST00000599808 SFT2D2O95562 160 aa8.34□□□□□ -1.07
HOMER3-211ENST00000599808 CT45A10P0DMU9 189 aa8.34□□□□□ -1.07
HOMER3-211ENST00000599808 SELENOTP62341 195 aa8.34□□□□□ -1.07
HOMER3-211ENST00000599808 LYPD5Q6UWN5 251 aa8.34□□□□□ -1.07
HOMER3-211ENST00000599808 LRTM2Q8N967 370 aa8.34□□□□□ -1.07
HOMER3-211ENST00000599808 C11orf72Q8NBR9 251 aa8.34□□□□□ -1.07
HOMER3-211ENST00000599808 SLC50A1Q9BRV3 221 aa8.34□□□□□ -1.07
HOMER3-211ENST00000599808 ARL6Q9H0F7 186 aa8.34□□□□□ -1.07
HOMER3-211ENST00000599808 ARV1Q9H2C2 271 aa8.34□□□□□ -1.07
HOMER3-211ENST00000599808 GSN-AS1Q9NRJ2 163 aa8.34□□□□□ -1.07
HOMER3-211ENST00000599808 FUT9Q9Y231 359 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms