RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.54□□□□□ -0.56
VRK3-207ENST00000594092 SFRP2Q96HF1 295 aa11.54□□□□□ -0.56
VRK3-207ENST00000594092 FMC1Q96HJ9 113 aa11.54□□□□□ -0.56
VRK3-207ENST00000594092 TRAV34A0A0B4J273 112 aa11.53□□□□□ -0.56
VRK3-207ENST00000594092 A0A1B0GUS0 222 aa11.53□□□□□ -0.56
VRK3-207ENST00000594092 K7EN84 100 aa11.53□□□□□ -0.56
VRK3-207ENST00000594092 KRTAP10-3P60369 221 aa11.53□□□□□ -0.56
VRK3-207ENST00000594092 FAM24BQ8N5W8 94 aa11.53□□□□□ -0.56
VRK3-207ENST00000594092 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.53□□□□□ -0.56
VRK3-207ENST00000594092 RAX2Q96IS3 184 aa11.53□□□□□ -0.56
VRK3-207ENST00000594092 KLF12Q9Y4X4 402 aa11.53□□□□□ -0.56
VRK3-207ENST00000594092 ISLRO14498 428 aa11.53□□□□□ -0.56
VRK3-207ENST00000594092 MEOX2P50222 304 aa11.53□□□□□ -0.56
VRK3-207ENST00000594092 BAGE2Q86Y30 109 aa11.53□□□□□ -0.56
VRK3-207ENST00000594092 URGCP-MRPS24S4R325 110 aa11.53□□□□□ -0.56
VRK3-207ENST00000594092 K7EQM0 130 aa11.52□□□□□ -0.57
VRK3-207ENST00000594092 MGST1P10620 155 aaKnown RBP11.52□□□□□ -0.57
VRK3-207ENST00000594092 CSN1S1P47710 185 aa11.52□□□□□ -0.57
VRK3-207ENST00000594092 FHL3Q13643 280 aa11.52□□□□□ -0.57
VRK3-207ENST00000594092 YPEL4Q96NS1 127 aa11.52□□□□□ -0.57
VRK3-207ENST00000594092 ZNF331Q9NQX6 463 aaPredicted RBP11.52□□□□□ -0.57
VRK3-207ENST00000594092 ADARB2-AS1A8MUL3 147 aa11.51□□□□□ -0.57
VRK3-207ENST00000594092 IGLV2-8P01709 118 aa11.51□□□□□ -0.57
VRK3-207ENST00000594092 S100PP25815 95 aa11.51□□□□□ -0.57
VRK3-207ENST00000594092 ELOBQ15370 118 aa11.51□□□□□ -0.57
VRK3-207ENST00000594092 GOLT1AQ6ZVE7 132 aa11.51□□□□□ -0.57
VRK3-207ENST00000594092 OR10G8Q8NGN5 311 aa11.51□□□□□ -0.57
VRK3-207ENST00000594092 DLX4Q92988 240 aaPredicted RBP11.51□□□□□ -0.57
VRK3-207ENST00000594092 SMIM12Q96EX1 92 aa11.51□□□□□ -0.57
VRK3-207ENST00000594092 SLC50A1Q9BRV3 221 aa11.51□□□□□ -0.57
VRK3-207ENST00000594092 C2orf70A6NJV1 201 aa11.51□□□□□ -0.57
VRK3-207ENST00000594092 CCL24O00175 119 aa11.51□□□□□ -0.57
VRK3-207ENST00000594092 GCGP01275 180 aa11.51□□□□□ -0.57
VRK3-207ENST00000594092 ERVFC1-1P60608 527 aa11.51□□□□□ -0.57
VRK3-207ENST00000594092 IGFL4Q6B9Z1 124 aa11.51□□□□□ -0.57
VRK3-207ENST00000594092 ARL6IP6Q8N6S5 226 aa11.51□□□□□ -0.57
VRK3-207ENST00000594092 SERTM2A0A1B0GWG4 89 aa11.5□□□□□ -0.57
VRK3-207ENST00000594092 DIRC3C9JPN6 131 aa11.5□□□□□ -0.57
VRK3-207ENST00000594092 M0R3E3 92 aa11.5□□□□□ -0.57
VRK3-207ENST00000594092 CBLN1P23435 193 aa11.5□□□□□ -0.57
VRK3-207ENST00000594092 BMI1P35226 326 aa11.5□□□□□ -0.57
VRK3-207ENST00000594092 OR5I1Q13606 314 aa11.5□□□□□ -0.57
VRK3-207ENST00000594092 TMEM75Q8N9X5 138 aa11.5□□□□□ -0.57
VRK3-207ENST00000594092 NHLRC2Q8NBF2 726 aa11.5□□□□□ -0.57
VRK3-207ENST00000594092 SGK494Q96LW2 274 aa11.5□□□□□ -0.57
VRK3-207ENST00000594092 SELENOKQ9Y6D0 94 aa11.5□□□□□ -0.57
VRK3-207ENST00000594092 LTAP01374 205 aa11.49□□□□□ -0.57
VRK3-207ENST00000594092 FOLR2P14207 255 aa11.49□□□□□ -0.57
VRK3-207ENST00000594092 FOXL1Q12952 345 aa11.49□□□□□ -0.57
VRK3-207ENST00000594092 NSUN5P1Q3KNT7 163 aa11.49□□□□□ -0.57
VRK3-207ENST00000594092 KCNIP4Q6PIL6 250 aa11.49□□□□□ -0.57
VRK3-207ENST00000594092 ADAMTSL5Q6ZMM2 481 aa11.49□□□□□ -0.57
VRK3-207ENST00000594092 OR9G4Q8NGQ1 327 aa11.49□□□□□ -0.57
VRK3-207ENST00000594092 TRBV6-1A0A0K0K1D8 114 aa11.49□□□□□ -0.57
VRK3-207ENST00000594092 LOC105371267A0A1B0GV96 52 aa11.49□□□□□ -0.57
VRK3-207ENST00000594092 RAB5AP20339 215 aa11.49□□□□□ -0.57
VRK3-207ENST00000594092 HLA-DMBP28068 263 aa11.49□□□□□ -0.57
VRK3-207ENST00000594092 TCF24Q7RTU0 167 aa11.49□□□□□ -0.57
VRK3-207ENST00000594092 Q86TA4 180 aa11.49□□□□□ -0.57
VRK3-207ENST00000594092 PEMTQ9UBM1 199 aa11.49□□□□□ -0.57
VRK3-207ENST00000594092 TRAV8-2A0A0B4J237 113 aa11.48□□□□□ -0.57
VRK3-207ENST00000594092 PFN1P07737 140 aaKnown RBP11.48□□□□□ -0.57
VRK3-207ENST00000594092 PRB4P10163 310 aaPredicted RBP11.48□□□□□ -0.57
VRK3-207ENST00000594092 RPL11P62913 178 aaKnown RBP11.48□□□□□ -0.57
VRK3-207ENST00000594092 PSG3Q16557 428 aa11.48□□□□□ -0.57
VRK3-207ENST00000594092 PRNTQ86SH4 94 aa11.48□□□□□ -0.57
VRK3-207ENST00000594092 NDUFA11Q86Y39 141 aa11.48□□□□□ -0.57
VRK3-207ENST00000594092 IMMP2LQ96T52 175 aa11.48□□□□□ -0.57
VRK3-207ENST00000594092 NRN1Q9NPD7 142 aa11.48□□□□□ -0.57
VRK3-207ENST00000594092 OSTCQ9NRP0 149 aa11.48□□□□□ -0.57
VRK3-207ENST00000594092 TRAV8-1A0A0A6YYK1 113 aa11.47□□□□□ -0.57
VRK3-207ENST00000594092 TGIF2-C20orf24A0A0A6YYL0 155 aa11.47□□□□□ -0.57
VRK3-207ENST00000594092 IGLV2-11P01706 119 aa11.47□□□□□ -0.57
VRK3-207ENST00000594092 CXCL1P09341 107 aa11.47□□□□□ -0.57
VRK3-207ENST00000594092 FLI1Q01543 452 aaPredicted RBP11.47□□□□□ -0.57
VRK3-207ENST00000594092 IBA57Q5T440 356 aaKnown RBP11.47□□□□□ -0.57
VRK3-207ENST00000594092 RNF182Q8N6D2 247 aa11.47□□□□□ -0.57
VRK3-207ENST00000594092 RNASE7Q9H1E1 156 aaKnown RBP11.47□□□□□ -0.57
VRK3-207ENST00000594092 BIN3Q9NQY0 253 aa11.47□□□□□ -0.57
VRK3-207ENST00000594092 MLXQ9UH92 298 aa11.47□□□□□ -0.57
VRK3-207ENST00000594092 IGKV3-7A0A075B6H7 116 aa11.46□□□□□ -0.57
VRK3-207ENST00000594092 SOCS3O14543 225 aa11.46□□□□□ -0.57
VRK3-207ENST00000594092 C16orf92Q96LL3 132 aa11.46□□□□□ -0.57
VRK3-207ENST00000594092 MLST8Q9BVC4 326 aa11.46□□□□□ -0.57
VRK3-207ENST00000594092 CLEC5AQ9NY25 188 aa11.46□□□□□ -0.57
VRK3-207ENST00000594092 PSG8Q9UQ74 426 aa11.46□□□□□ -0.57
VRK3-207ENST00000594092 TRBV24-1A0A075B6N3 115 aa11.46□□□□□ -0.58
VRK3-207ENST00000594092 FBLL1A6NHQ2 334 aaKnown RBP11.46□□□□□ -0.58
VRK3-207ENST00000594092 M0QZ24 198 aa11.46□□□□□ -0.58
VRK3-207ENST00000594092 CSN3P07498 182 aa11.46□□□□□ -0.58
VRK3-207ENST00000594092 LCN12Q6JVE5 192 aa11.46□□□□□ -0.58
VRK3-207ENST00000594092 FAM231DQ6ZW35 169 aa11.46□□□□□ -0.58
VRK3-207ENST00000594092 TMEM183AQ8IXX5 376 aa11.46□□□□□ -0.58
VRK3-207ENST00000594092 MRPL53Q96EL3 112 aaKnown RBP11.46□□□□□ -0.58
VRK3-207ENST00000594092 FAM210BQ96KR6 192 aa11.46□□□□□ -0.58
VRK3-207ENST00000594092 ZFP30Q9Y2G7 519 aa11.46□□□□□ -0.58
VRK3-207ENST00000594092 ZNF705FA8MVS1 300 aaPredicted RBP11.45□□□□□ -0.58
VRK3-207ENST00000594092 PRR27Q6MZM9 219 aa11.45□□□□□ -0.58
VRK3-207ENST00000594092 IL36BQ9NZH7 164 aa11.45□□□□□ -0.58
VRK3-207ENST00000594092 V9GYV3 84 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms