RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 ITPR3Q14573 2671 aa9.17□□□□□ -0.94
NPC1-214ENST00000593280 CHEK1O14757 476 aa9.16□□□□□ -0.94
NPC1-214ENST00000593280 P01737 135 aa9.16□□□□□ -0.94
NPC1-214ENST00000593280 UNQ9165/PRO28630Q6UXU0 137 aa9.16□□□□□ -0.94
NPC1-214ENST00000593280 GBGT1Q8N5D6 347 aa9.16□□□□□ -0.94
NPC1-214ENST00000593280 RPP21Q9H633 154 aaKnown RBP9.16□□□□□ -0.94
NPC1-214ENST00000593280 C19orf71A6NCJ1 209 aa9.16□□□□□ -0.94
NPC1-214ENST00000593280 FBLL1A6NHQ2 334 aaKnown RBP9.16□□□□□ -0.94
NPC1-214ENST00000593280 PRB4P10163 310 aaPredicted RBP9.16□□□□□ -0.94
NPC1-214ENST00000593280 IGFL4Q6B9Z1 124 aa9.16□□□□□ -0.94
NPC1-214ENST00000593280 C16orf54Q6UWD8 224 aa9.16□□□□□ -0.94
NPC1-214ENST00000593280 LINC00322Q6ZN03 302 aaPredicted RBP9.16□□□□□ -0.94
NPC1-214ENST00000593280 PEF1Q9UBV8 284 aaKnown RBP9.16□□□□□ -0.94
NPC1-214ENST00000593280 CSPG4Q6UVK1 2322 aa9.15□□□□□ -0.94
NPC1-214ENST00000593280 IGKV2-40A0A087WW87 121 aaPredicted RBP9.15□□□□□ -0.94
NPC1-214ENST00000593280 IZUMO1RA6ND01 250 aa9.15□□□□□ -0.94
NPC1-214ENST00000593280 IGKV2D-40P01614 121 aaPredicted RBP9.15□□□□□ -0.94
NPC1-214ENST00000593280 HLA-DMBP28068 263 aa9.15□□□□□ -0.94
NPC1-214ENST00000593280 FOXE3Q13461 319 aa9.15□□□□□ -0.94
NPC1-214ENST00000593280 CT83Q5H943 113 aa9.15□□□□□ -0.94
NPC1-214ENST00000593280 C10orf99Q6UWK7 81 aa9.15□□□□□ -0.94
NPC1-214ENST00000593280 TMEM86BQ8N661 226 aa9.15□□□□□ -0.94
NPC1-214ENST00000593280 TSKUQ8WUA8 353 aa9.15□□□□□ -0.94
NPC1-214ENST00000593280 GLMPQ8WWB7 406 aa9.15□□□□□ -0.94
NPC1-214ENST00000593280 ZC2HC1AQ96GY0 325 aa9.15□□□□□ -0.94
NPC1-214ENST00000593280 MYO9AB2RTY4 2548 aa9.14□□□□□ -0.95
NPC1-214ENST00000593280 UNC79Q9P2D8 2635 aa9.14□□□□□ -0.95
NPC1-214ENST00000593280 CD5LO43866 347 aa9.14□□□□□ -0.95
NPC1-214ENST00000593280 HOXA5P20719 270 aa9.14□□□□□ -0.95
NPC1-214ENST00000593280 CBLN1P23435 193 aa9.14□□□□□ -0.95
NPC1-214ENST00000593280 COX19Q49B96 90 aa9.14□□□□□ -0.95
NPC1-214ENST00000593280 SMUG1Q53HV7 270 aa9.14□□□□□ -0.95
NPC1-214ENST00000593280 WDR73Q6P4I2 378 aa9.14□□□□□ -0.95
NPC1-214ENST00000593280 Q71RC1 249 aaPredicted RBP9.14□□□□□ -0.95
NPC1-214ENST00000593280 OR4B1Q8NGF8 309 aa9.14□□□□□ -0.95
NPC1-214ENST00000593280 DUX5Q96PT3 197 aa9.14□□□□□ -0.95
NPC1-214ENST00000593280 NAT8BQ9UHF3 227 aa9.14□□□□□ -0.95
NPC1-214ENST00000593280 MXRA5Q9NR99 2828 aa9.14□□□□□ -0.95
NPC1-214ENST00000593280 A0A1W2PS18 150 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 ZNF705FA8MVS1 300 aaPredicted RBP9.13□□□□□ -0.95
NPC1-214ENST00000593280 A8MWL6 223 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 SPINK4O60575 86 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 RPLP1P05386 114 aaKnown RBP9.13□□□□□ -0.95
NPC1-214ENST00000593280 ELANEP08246 267 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 CT45A10P0DMU9 189 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 KRTAP1-1Q07627 177 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 LCN12Q6JVE5 192 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 MRPL54Q6P161 138 aaKnown RBP9.13□□□□□ -0.95
NPC1-214ENST00000593280 C8orf86Q6ZUL3 223 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 Q8N2B8 174 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 RNF182Q8N6D2 247 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 MRPL53Q96EL3 112 aaKnown RBP9.13□□□□□ -0.95
NPC1-214ENST00000593280 NEU1Q99519 415 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 ASCL2Q99929 193 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 MRPL18Q9H0U6 180 aaKnown RBP9.13□□□□□ -0.95
NPC1-214ENST00000593280 NOTCH2Q04721 2471 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 CREBBPQ92793 2442 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 IGHV7-4-1A0A0J9YVY3 117 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 SNURFLB1AK76 121 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 NPIPB6E9PJ23 425 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 MT-ND6P03923 174 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 CDX1P47902 265 aaPredicted RBP9.13□□□□□ -0.95
NPC1-214ENST00000593280 FAM106AQ4KMX7 169 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 SAPCD1Q5SSQ6 148 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 NUP35Q8NFH5 326 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 C8orf49Q96NF6 230 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 GNB1LQ9BYB4 327 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 DAZ1Q9NQZ3 744 aaKnown RBP9.13□□□□□ -0.95
NPC1-214ENST00000593280 YAE1D1Q9NRH1 226 aa9.13□□□□□ -0.95
NPC1-214ENST00000593280 TRAV8-2A0A0B4J237 113 aa9.12□□□□□ -0.95
NPC1-214ENST00000593280 XKRY2A2RUG3 117 aa9.12□□□□□ -0.95
NPC1-214ENST00000593280 RBAKDNA6NC62 111 aa9.12□□□□□ -0.95
NPC1-214ENST00000593280 HIGD1CA8MV81 97 aa9.12□□□□□ -0.95
NPC1-214ENST00000593280 LGALS1P09382 135 aaKnown RBP9.12□□□□□ -0.95
NPC1-214ENST00000593280 FRMD6-AS1P0C7T7 363 aa9.12□□□□□ -0.95
NPC1-214ENST00000593280 GPHB5Q86YW7 130 aa9.12□□□□□ -0.95
NPC1-214ENST00000593280 OR2D3Q8NGH3 330 aa9.12□□□□□ -0.95
NPC1-214ENST00000593280 MYOZ3Q8TDC0 251 aa9.12□□□□□ -0.95
NPC1-214ENST00000593280 VGLL1Q99990 258 aa9.12□□□□□ -0.95
NPC1-214ENST00000593280 GFRA4Q9GZZ7 299 aa9.12□□□□□ -0.95
NPC1-214ENST00000593280 CLEC5AQ9NY25 188 aa9.12□□□□□ -0.95
NPC1-214ENST00000593280 ANK3Q12955 4377 aaKnown RBP9.11□□□□□ -0.95
NPC1-214ENST00000593280 DNAJC9-AS1A6NH13 148 aa9.11□□□□□ -0.95
NPC1-214ENST00000593280 K7EMT4 169 aa9.11□□□□□ -0.95
NPC1-214ENST00000593280 S100A8P05109 93 aa9.11□□□□□ -0.95
NPC1-214ENST00000593280 RAB4BP61018 213 aa9.11□□□□□ -0.95
NPC1-214ENST00000593280 TM4SF20Q53R12 229 aa9.11□□□□□ -0.95
NPC1-214ENST00000593280 RASL11AQ6T310 242 aa9.11□□□□□ -0.95
NPC1-214ENST00000593280 TMEM136Q6ZRR5 245 aa9.11□□□□□ -0.95
NPC1-214ENST00000593280 TCF24Q7RTU0 167 aa9.11□□□□□ -0.95
NPC1-214ENST00000593280 RNF152Q8N8N0 203 aa9.11□□□□□ -0.95
NPC1-214ENST00000593280 Q8TAT8 98 aa9.11□□□□□ -0.95
NPC1-214ENST00000593280 WIPF2Q8TF74 440 aaPredicted RBP9.11□□□□□ -0.95
NPC1-214ENST00000593280 C16orf92Q96LL3 132 aa9.11□□□□□ -0.95
NPC1-214ENST00000593280 PRR25Q96S07 402 aa9.11□□□□□ -0.95
NPC1-214ENST00000593280 NDFIP1Q9BT67 221 aa9.11□□□□□ -0.95
NPC1-214ENST00000593280 UFC1Q9Y3C8 167 aa9.11□□□□□ -0.95
NPC1-214ENST00000593280 FAM231BA6NCW3 169 aa9.1□□□□□ -0.95
NPC1-214ENST00000593280 PRAC2D3DTV9 90 aa9.1□□□□□ -0.95
NPC1-214ENST00000593280 HLA-DQA1P01909 254 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms