RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 H3BTX0 84 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 NUPR1O60356 82 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 P01737 135 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 IGHG4P01861 327 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 APCSP02743 223 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 IGHV4-38-2P0DP08 117 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 GZMBP10144 247 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 PPIFP30405 207 aaKnown RBP4.16□□□□□ -1.74
SF3B3-213ENST00000569687 CRIP1P50238 77 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 RELQ04864 619 aaPredicted RBP4.16□□□□□ -1.74
SF3B3-213ENST00000569687 LOXL1Q08397 574 aaPredicted RBP4.16□□□□□ -1.74
SF3B3-213ENST00000569687 KLF5Q13887 457 aaPredicted RBP4.16□□□□□ -1.74
SF3B3-213ENST00000569687 GDF5OSQ5U4N7 250 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 CYB5R2Q6BCY4 276 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 RBPMS2Q6ZRY4 209 aaKnown RBP4.16□□□□□ -1.74
SF3B3-213ENST00000569687 GOLT1AQ6ZVE7 132 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 Q86TA4 180 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 TMEM256Q8N2U0 113 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 GATD1Q8NB37 220 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 NHLRC2Q8NBF2 726 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 GTSF1Q8WW33 167 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 NRGNQ92686 78 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 NEU1Q99519 415 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 AAMDCQ9H7C9 122 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 CLEC5AQ9NY25 188 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 S4R3C0 116 aa4.16□□□□□ -1.74
SF3B3-213ENST00000569687 A0A087WWL8 130 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.15□□□□□ -1.75
SF3B3-213ENST00000569687 A0A1B0GW15 77 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 TMEM89A2RUT3 159 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 RBAKDNA6NC62 111 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 CA1P00915 261 aaPredicted RBP4.15□□□□□ -1.75
SF3B3-213ENST00000569687 IGHV3-23P01764 117 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 APOHP02749 345 aaPredicted RBP4.15□□□□□ -1.75
SF3B3-213ENST00000569687 GPR183P32249 361 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 TCL1AP56279 114 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 LINC00310P59036 64 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 KRTAP10-9P60411 292 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 RAB4BP61018 213 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 ECSCRQ19T08 205 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 PDZD11Q5EBL8 140 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 LCN12Q6JVE5 192 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 CLEC19AQ6UXS0 136 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 BRD3OSQ6XYD6 125 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 PRNTQ86SH4 94 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 BAGE3Q86Y29 109 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 LRRC75A-AS1Q8N1F1 130 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 CIARTQ8N365 385 aaPredicted RBP4.15□□□□□ -1.75
SF3B3-213ENST00000569687 MRPL53Q96EL3 112 aaKnown RBP4.15□□□□□ -1.75
SF3B3-213ENST00000569687 SGK494Q96LW2 274 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 NDFIP1Q9BT67 221 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 PRDM13Q9H4Q3 707 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 GNB4Q9HAV0 340 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 BEX4Q9NWD9 120 aaPredicted RBP4.15□□□□□ -1.75
SF3B3-213ENST00000569687 HIF1ANQ9NWT6 349 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 PPP1R14DQ9NXH3 145 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 MED13LQ71F56 2210 aa4.15□□□□□ -1.75
SF3B3-213ENST00000569687 ASH1LQ9NR48 2969 aaKnown RBP4.15□□□□□ -1.75
SF3B3-213ENST00000569687 SVEP1Q4LDE5 3571 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 CSMD1Q96PZ7 3565 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 SPTAN1Q13813 2472 aaKnown RBP4.14□□□□□ -1.75
SF3B3-213ENST00000569687 CELSR2Q9HCU4 2923 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 IGHV3OR16-10A0A075B7F0 116 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 TRAV8-1A0A0A6YYK1 113 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 TRAV40A0A0B4J280 105 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 A0A0G2JLM5 398 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 SH2D7A6NKC9 451 aaPredicted RBP4.14□□□□□ -1.75
SF3B3-213ENST00000569687 M0R3E3 92 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 CHEK1O14757 476 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 SPINK4O60575 86 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 SERF1AO75920 110 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 FSHBP01225 129 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 GPX1P07203 203 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 BTF3P20290 206 aaKnown RBP4.14□□□□□ -1.75
SF3B3-213ENST00000569687 TPPP2P59282 170 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 RPS20P60866 119 aaKnown RBP4.14□□□□□ -1.75
SF3B3-213ENST00000569687 PKIAP61925 76 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 CFHR3Q02985 330 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 RIGQ13278 110 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 FAM162BQ5T6X4 162 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 Q6AWC8 147 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 PRR27Q6MZM9 219 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 MRPL54Q6P161 138 aaKnown RBP4.14□□□□□ -1.75
SF3B3-213ENST00000569687 PRSS57Q6UWY2 283 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 C9orf139Q6ZV77 190 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 TMEM219Q86XT9 240 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 OR2D3Q8NGH3 330 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 ZC2HC1AQ96GY0 325 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 MS4A10Q96PG2 267 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 PRR25Q96S07 402 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 METTL26Q96S19 204 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 SLC50A1Q9BRV3 221 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 ALKBH7Q9BT30 221 aaPredicted RBP4.14□□□□□ -1.75
SF3B3-213ENST00000569687 TMEM160Q9NX00 188 aa4.14□□□□□ -1.75
SF3B3-213ENST00000569687 LRRK2Q5S007 2527 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 WNK2Q9Y3S1 2297 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 A0A1W2PS18 150 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 GRIFINA4D1Z8 144 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 H3BUX3 64 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 K7EMT4 169 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms