RNA–Protein interactions for RNA: ENST00000568494.1

ZNRF1-208, Transcript of zinc and ring finger 1, human

TSL 2

Gene ZNRF1, Length 2,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNRF1-208	ENST00000568494	GATA3	P23771	443 aa		10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	TMEM136	Q6ZRR5	245 aa		10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	ASCL2	Q99929	193 aa		10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	ZNF492	Q9P255	531 aa		10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	CR1	P17927	2039 aa		10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	TRBV7-1	A0A0A6YYK4	115 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	C19orf71	A6NCJ1	209 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	DIRC3	C9JPN6	131 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	ZNF705D	P0CH99	300 aa	Predicted RBP	10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	ZNF705B	P0CI00	300 aa	Predicted RBP	10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	PDE6H	Q13956	83 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	TMEM190	Q8WZ59	177 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	PRSS22	Q9GZN4	317 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	KIR2DL5B	A0A0G2JN68	375 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	KIR2DL5B	A0A0G2JPC4	375 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	RNF223	E7ERA6	249 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	BLCAP	P62952	87 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494		Q6ZWC4	215 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	KIR2DL5A	Q8N109	375 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	TMEM75	Q8N9X5	138 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	NUP35	Q8NFH5	326 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	TSKU	Q8WUA8	353 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	RPP21	Q9H633	154 aa	Known RBP	10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	NAT8B	Q9UHF3	227 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	PSG8	Q9UQ74	426 aa		10.28	□□□□□ -0.76
ZNRF1-208	ENST00000568494	CLPSL1	A2RUU4	121 aa		10.27	□□□□□ -0.77
ZNRF1-208	ENST00000568494	ZNF785	A8K8V0	405 aa		10.27	□□□□□ -0.77
ZNRF1-208	ENST00000568494	IGHG2	P01859	326 aa		10.27	□□□□□ -0.77
ZNRF1-208	ENST00000568494	TRGV3	P03979	118 aa		10.27	□□□□□ -0.77
ZNRF1-208	ENST00000568494	IGF1	P05019	195 aa		10.27	□□□□□ -0.77
ZNRF1-208	ENST00000568494	SST	P61278	116 aa		10.27	□□□□□ -0.77
ZNRF1-208	ENST00000568494	PSG9	Q00887	426 aa		10.27	□□□□□ -0.77
ZNRF1-208	ENST00000568494		Q6ZS46	218 aa		10.27	□□□□□ -0.77
ZNRF1-208	ENST00000568494	NEU1	Q99519	415 aa		10.27	□□□□□ -0.77
ZNRF1-208	ENST00000568494	AAMDC	Q9H7C9	122 aa		10.27	□□□□□ -0.77
ZNRF1-208	ENST00000568494		F2Z2F3	143 aa		10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494		P01737	135 aa		10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494	PSG3	Q16557	428 aa		10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494	DAZAP1	Q96EP5	407 aa	Known RBP	10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494	IGHV3-66	A0A0C4DH42	116 aa		10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494	FAM223B	A6NKX1	122 aa		10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494		K7EQM0	130 aa		10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494	TGFA	P01135	160 aa		10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494	S100A7	P31151	101 aa		10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494	OR10J3	Q5JRS4	329 aa		10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494	IGFL4	Q6B9Z1	124 aa		10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494	TCF24	Q7RTU0	167 aa		10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494	FAM223A	Q8IWN6	122 aa		10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494	SAMD10	Q9BYL1	202 aa		10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.26	□□□□□ -0.77
ZNRF1-208	ENST00000568494	HIGD1C	A8MV81	97 aa		10.25	□□□□□ -0.77
ZNRF1-208	ENST00000568494		M0QZK8	103 aa		10.25	□□□□□ -0.77
ZNRF1-208	ENST00000568494	BUB3	O43684	328 aa		10.25	□□□□□ -0.77
ZNRF1-208	ENST00000568494	APOH	P02749	345 aa	Predicted RBP	10.25	□□□□□ -0.77
ZNRF1-208	ENST00000568494	PPIF	P30405	207 aa	Known RBP	10.25	□□□□□ -0.77
ZNRF1-208	ENST00000568494	DEFB112	Q30KQ8	113 aa		10.25	□□□□□ -0.77
ZNRF1-208	ENST00000568494	KIAA1644	Q3SXP7	199 aa		10.25	□□□□□ -0.77
ZNRF1-208	ENST00000568494	GDF5OS	Q5U4N7	250 aa		10.25	□□□□□ -0.77
ZNRF1-208	ENST00000568494	ZC2HC1A	Q96GY0	325 aa		10.25	□□□□□ -0.77
ZNRF1-208	ENST00000568494	ZFP30	Q9Y2G7	519 aa		10.25	□□□□□ -0.77
ZNRF1-208	ENST00000568494	IGHV3OR16-13	A0A075B7E8	117 aa		10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	IGHV3-74	A0A0B4J1X5	117 aa		10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	ZNF207	O43670	478 aa	Known RBP	10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	HLA-DQA1	P01909	254 aa		10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	HLA-DMB	P28068	263 aa		10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	CSN1S1	P47710	185 aa		10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	LOXL1	Q08397	574 aa	Predicted RBP	10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	TEX43	Q6ZNM6	134 aa		10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	IGHV3-49	A0A0A0MS15	119 aa		10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494		A8MWL6	223 aa		10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494		J3QLI3	93 aa		10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	EREG	O14944	169 aa		10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	IGHG4	P01861	327 aa		10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	CD33	P20138	364 aa		10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	REL	Q04864	619 aa	Predicted RBP	10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	CT83	Q5H943	113 aa		10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	SIGLECL1	Q8N7X8	197 aa		10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	WIPF2	Q8TF74	440 aa	Predicted RBP	10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	GTSF1	Q8WW33	167 aa		10.24	□□□□□ -0.77
ZNRF1-208	ENST00000568494	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	NPIPB6	E9PJ23	425 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	IGKV2D-40	P01614	121 aa	Predicted RBP	10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	IGHV4-31	P0DP07	118 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	C16orf54	Q6UWD8	224 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	C8orf49	Q96NF6	230 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	ATP6V0B	Q99437	205 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	KLK15	Q9H2R5	256 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	ZFHX3	Q15911	3703 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	CHEK1	O14757	476 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	ZNF253	O75346	499 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	TRBV12-3	P01733	135 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	IGHV4-59	P01825	116 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	APCS	P02743	223 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	GPX1	P07203	203 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	ARL3	P36405	182 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	CRIP1	P50238	77 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	RAB9A	P51151	201 aa		10.23	□□□□□ -0.77
ZNRF1-208	ENST00000568494	RASL11A	Q6T310	242 aa		10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms