RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 CST9LQ9H4G1 147 aa18.19■□□□□ 0.5
LINC00543-201ENST00000567234 C7orf69Q9H7B7 122 aa18.19■□□□□ 0.5
LINC00543-201ENST00000567234 CSMD1Q96PZ7 3565 aa18.19■□□□□ 0.5
LINC00543-201ENST00000567234 ATP6V0E1O15342 81 aa18.19■□□□□ 0.5
LINC00543-201ENST00000567234 OR5AL1P0C617 328 aa18.19■□□□□ 0.5
LINC00543-201ENST00000567234 FRMD6-AS1P0C7T7 363 aa18.19■□□□□ 0.5
LINC00543-201ENST00000567234 HIST1H1EP10412 219 aaKnown RBP18.19■□□□□ 0.5
LINC00543-201ENST00000567234 Q56UQ5 140 aa18.19■□□□□ 0.5
LINC00543-201ENST00000567234 MS4A6AQ9H2W1 248 aa18.19■□□□□ 0.5
LINC00543-201ENST00000567234 NTF3P20783 257 aa18.18■□□□□ 0.5
LINC00543-201ENST00000567234 NUDT10Q8NFP7 164 aa18.18■□□□□ 0.5
LINC00543-201ENST00000567234 PIFOQ8TCI5 191 aa18.18■□□□□ 0.5
LINC00543-201ENST00000567234 BLNKQ8WV28 456 aa18.18■□□□□ 0.5
LINC00543-201ENST00000567234 PMCHL2Q9BQD1 86 aa18.18■□□□□ 0.5
LINC00543-201ENST00000567234 EPDR1Q9UM22 224 aa18.18■□□□□ 0.5
LINC00543-201ENST00000567234 TRAV34A0A0B4J273 112 aa18.17■□□□□ 0.5
LINC00543-201ENST00000567234 IL4P05112 153 aa18.17■□□□□ 0.5
LINC00543-201ENST00000567234 IGHV3OR16-10A0A075B7F0 116 aa18.16■□□□□ 0.5
LINC00543-201ENST00000567234 CD5LO43866 347 aa18.16■□□□□ 0.5
LINC00543-201ENST00000567234 KIAA1644Q3SXP7 199 aa18.16■□□□□ 0.5
LINC00543-201ENST00000567234 BRD3OSQ6XYD6 125 aa18.16■□□□□ 0.5
LINC00543-201ENST00000567234 C5orf17Q8NAS9 161 aa18.16■□□□□ 0.5
LINC00543-201ENST00000567234 RNASE7Q9H1E1 156 aaKnown RBP18.16■□□□□ 0.5
LINC00543-201ENST00000567234 NAV2Q8IVL1 2488 aa18.16■□□□□ 0.5
LINC00543-201ENST00000567234 PGPA6NDG6 321 aa18.16■□□□□ 0.5
LINC00543-201ENST00000567234 IGHV4-38-2P0DP08 117 aa18.16■□□□□ 0.5
LINC00543-201ENST00000567234 EBLN2Q6P2I7 272 aa18.16■□□□□ 0.5
LINC00543-201ENST00000567234 BPIFA4PQ86YQ2 179 aa18.16■□□□□ 0.5
LINC00543-201ENST00000567234 HIF1ANQ9NWT6 349 aa18.16■□□□□ 0.5
LINC00543-201ENST00000567234 KLF12Q9Y4X4 402 aa18.16■□□□□ 0.5
LINC00543-201ENST00000567234 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.15■□□□□ 0.5
LINC00543-201ENST00000567234 HECTD1Q9ULT8 2610 aa18.15■□□□□ 0.5
LINC00543-201ENST00000567234 TAX1BP3O14907 124 aa18.15■□□□□ 0.5
LINC00543-201ENST00000567234 SLC25A5P05141 298 aaKnown RBP18.15■□□□□ 0.5
LINC00543-201ENST00000567234 CRIP2P52943 208 aaPredicted RBP18.15■□□□□ 0.5
LINC00543-201ENST00000567234 ECSCRQ19T08 205 aa18.15■□□□□ 0.5
LINC00543-201ENST00000567234 SLC25A34Q6PIV7 304 aa18.15■□□□□ 0.5
LINC00543-201ENST00000567234 FAM19A2Q8N3H0 131 aa18.15■□□□□ 0.5
LINC00543-201ENST00000567234 VPS25Q9BRG1 176 aa18.15■□□□□ 0.5
LINC00543-201ENST00000567234 S4R3C0 116 aa18.15■□□□□ 0.5
LINC00543-201ENST00000567234 SLAQ13239 276 aa18.14■□□□□ 0.5
LINC00543-201ENST00000567234 MRPL54Q6P161 138 aaKnown RBP18.14■□□□□ 0.5
LINC00543-201ENST00000567234 Q9H3A6 140 aa18.14■□□□□ 0.5
LINC00543-201ENST00000567234 OTORQ9NRC9 128 aa18.14■□□□□ 0.5
LINC00543-201ENST00000567234 TMEM191AQ9H0A3 160 aa18.14■□□□□ 0.49
LINC00543-201ENST00000567234 CSTL1Q9H114 145 aa18.14■□□□□ 0.49
LINC00543-201ENST00000567234 CHTOPQ9Y3Y2 248 aaKnown RBP18.14■□□□□ 0.49
LINC00543-201ENST00000567234 HSBP1L1C9JCN9 74 aa18.13■□□□□ 0.49
LINC00543-201ENST00000567234 CTSGP08311 255 aa18.13■□□□□ 0.49
LINC00543-201ENST00000567234 BVES-AS1Q5T3Y7 98 aa18.13■□□□□ 0.49
LINC00543-201ENST00000567234 LINC01356Q8N9X3 169 aa18.13■□□□□ 0.49
LINC00543-201ENST00000567234 NHLRC2Q8NBF2 726 aa18.13■□□□□ 0.49
LINC00543-201ENST00000567234 A0A096LNT2 108 aa18.12■□□□□ 0.49
LINC00543-201ENST00000567234 DEFB113Q30KQ7 82 aa18.12■□□□□ 0.49
LINC00543-201ENST00000567234 LCN12Q6JVE5 192 aa18.12■□□□□ 0.49
LINC00543-201ENST00000567234 TCF24Q7RTU0 167 aa18.12■□□□□ 0.49
LINC00543-201ENST00000567234 LYPD1Q8N2G4 141 aa18.12■□□□□ 0.49
LINC00543-201ENST00000567234 ZNF502Q8TBZ5 544 aa18.12■□□□□ 0.49
LINC00543-201ENST00000567234 PEF1Q9UBV8 284 aaKnown RBP18.12■□□□□ 0.49
LINC00543-201ENST00000567234 UNC79Q9P2D8 2635 aa18.12■□□□□ 0.49
LINC00543-201ENST00000567234 S100A7P31151 101 aa18.12■□□□□ 0.49
LINC00543-201ENST00000567234 C15orf32Q32M92 178 aa18.12■□□□□ 0.49
LINC00543-201ENST00000567234 CT83Q5H943 113 aa18.12■□□□□ 0.49
LINC00543-201ENST00000567234 TMEM219Q86XT9 240 aa18.12■□□□□ 0.49
LINC00543-201ENST00000567234 LINC00479Q96M42 142 aa18.12■□□□□ 0.49
LINC00543-201ENST00000567234 A0A1B0GXF2 115 aa18.11■□□□□ 0.49
LINC00543-201ENST00000567234 HIST1H1AQ02539 215 aaPredicted RBP18.11■□□□□ 0.49
LINC00543-201ENST00000567234 RNF151Q2KHN1 245 aa18.11■□□□□ 0.49
LINC00543-201ENST00000567234 C19orf54Q5BKX5 351 aa18.11■□□□□ 0.49
LINC00543-201ENST00000567234 PRR27Q6MZM9 219 aa18.11■□□□□ 0.49
LINC00543-201ENST00000567234 OR2T8A6NH00 312 aa18.1■□□□□ 0.49
LINC00543-201ENST00000567234 OR4C46A6NHA9 309 aa18.1■□□□□ 0.49
LINC00543-201ENST00000567234 LINC01548A6NM66 108 aa18.1■□□□□ 0.49
LINC00543-201ENST00000567234 MRPS12O15235 138 aaKnown RBP18.1■□□□□ 0.49
LINC00543-201ENST00000567234 FMC1Q96HJ9 113 aa18.1■□□□□ 0.49
LINC00543-201ENST00000567234 ATP6V0BQ99437 205 aa18.1■□□□□ 0.49
LINC00543-201ENST00000567234 SERTAD4Q9NUC0 356 aa18.1■□□□□ 0.49
LINC00543-201ENST00000567234 BEX4Q9NWD9 120 aaPredicted RBP18.1■□□□□ 0.49
LINC00543-201ENST00000567234 TRBV19A0A075B6N1 114 aa18.09■□□□□ 0.49
LINC00543-201ENST00000567234 A6NDX4 124 aa18.09■□□□□ 0.49
LINC00543-201ENST00000567234 J3QLI3 93 aa18.09■□□□□ 0.49
LINC00543-201ENST00000567234 MGST1P10620 155 aaKnown RBP18.09■□□□□ 0.49
LINC00543-201ENST00000567234 TCL1AP56279 114 aa18.09■□□□□ 0.49
LINC00543-201ENST00000567234 GNG5P63218 68 aa18.09■□□□□ 0.49
LINC00543-201ENST00000567234 SEC11AP67812 179 aa18.09■□□□□ 0.49
LINC00543-201ENST00000567234 G3V318 75 aa18.09■□□□□ 0.49
LINC00543-201ENST00000567234 TCRAP04437 139 aa18.09■□□□□ 0.49
LINC00543-201ENST00000567234 DPF1Q92782 380 aa18.09■□□□□ 0.49
LINC00543-201ENST00000567234 TRAV41A0A0B4J266 112 aa18.08■□□□□ 0.48
LINC00543-201ENST00000567234 SYS1-DBNDD2H3BUS1 97 aa18.08■□□□□ 0.48
LINC00543-201ENST00000567234 IGHV3-23P01764 117 aa18.08■□□□□ 0.48
LINC00543-201ENST00000567234 PDE6HQ13956 83 aa18.08■□□□□ 0.48
LINC00543-201ENST00000567234 ATOH7Q8N100 152 aa18.08■□□□□ 0.48
LINC00543-201ENST00000567234 NUP35Q8NFH5 326 aa18.08■□□□□ 0.48
LINC00543-201ENST00000567234 ITPR2Q14571 2701 aa18.08■□□□□ 0.48
LINC00543-201ENST00000567234 SVEP1Q4LDE5 3571 aa18.08■□□□□ 0.48
LINC00543-201ENST00000567234 TRBV7-1A0A0A6YYK4 115 aa18.07■□□□□ 0.48
LINC00543-201ENST00000567234 SH2D7A6NKC9 451 aaPredicted RBP18.07■□□□□ 0.48
LINC00543-201ENST00000567234 SPINK4O60575 86 aa18.07■□□□□ 0.48
LINC00543-201ENST00000567234 LOXL1Q08397 574 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms