RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 SH2D1AO60880 128 aa11.17□□□□□ -0.62
CDH1-209ENST00000566510 C5orf64Q2M2E5 130 aa11.17□□□□□ -0.62
CDH1-209ENST00000566510 LINC01545Q5VT33 79 aa11.17□□□□□ -0.62
CDH1-209ENST00000566510 Q8TAT8 98 aa11.17□□□□□ -0.62
CDH1-209ENST00000566510 TRAV30A0A087WSZ9 112 aa11.16□□□□□ -0.62
CDH1-209ENST00000566510 PRELID3AQ96N28 172 aa11.16□□□□□ -0.62
CDH1-209ENST00000566510 FANCD2OSQ96PS1 177 aa11.16□□□□□ -0.62
CDH1-209ENST00000566510 MS4A6AQ9H2W1 248 aa11.16□□□□□ -0.62
CDH1-209ENST00000566510 IGHV2-70DA0A0C4DH43 119 aa11.16□□□□□ -0.62
CDH1-209ENST00000566510 NPIPB5A8MRT5 1133 aa11.16□□□□□ -0.62
CDH1-209ENST00000566510 TAX1BP3O14907 124 aa11.16□□□□□ -0.62
CDH1-209ENST00000566510 PCP4P48539 62 aa11.16□□□□□ -0.62
CDH1-209ENST00000566510 TWIST1Q15672 202 aa11.16□□□□□ -0.62
CDH1-209ENST00000566510 CFHR4Q92496 578 aa11.16□□□□□ -0.62
CDH1-209ENST00000566510 ARPC1AQ92747 370 aa11.16□□□□□ -0.62
CDH1-209ENST00000566510 C21orf62Q9NYP8 219 aa11.16□□□□□ -0.62
CDH1-209ENST00000566510 SIGLEC8Q9NYZ4 499 aa11.16□□□□□ -0.62
CDH1-209ENST00000566510 LOC105371242A0A075B767 164 aa11.15□□□□□ -0.62
CDH1-209ENST00000566510 NHLH1Q02575 133 aa11.15□□□□□ -0.62
CDH1-209ENST00000566510 TIMD4Q96H15 378 aa11.15□□□□□ -0.62
CDH1-209ENST00000566510 SMKR1H3BMG3 65 aa11.15□□□□□ -0.62
CDH1-209ENST00000566510 GPR183P32249 361 aa11.15□□□□□ -0.62
CDH1-209ENST00000566510 FOXC1Q12948 553 aa11.15□□□□□ -0.62
CDH1-209ENST00000566510 COL6A6A6NMZ7 2263 aa11.15□□□□□ -0.62
CDH1-209ENST00000566510 AKAP6Q13023 2319 aa11.15□□□□□ -0.63
CDH1-209ENST00000566510 HRNRQ86YZ3 2850 aaPredicted RBP11.14□□□□□ -0.63
CDH1-209ENST00000566510 IGLV11-55A0A075B6I3 123 aa11.14□□□□□ -0.63
CDH1-209ENST00000566510 NDPQ00604 133 aa11.14□□□□□ -0.63
CDH1-209ENST00000566510 PSG9Q00887 426 aa11.14□□□□□ -0.63
CDH1-209ENST00000566510 PDE6HQ13956 83 aa11.14□□□□□ -0.63
CDH1-209ENST00000566510 ORMDL3Q8N138 153 aa11.14□□□□□ -0.63
CDH1-209ENST00000566510 LY6G5BQ8NDX9 201 aa11.14□□□□□ -0.63
CDH1-209ENST00000566510 NPBQ8NG41 125 aa11.14□□□□□ -0.63
CDH1-209ENST00000566510 OR11H6Q8NGC7 330 aa11.14□□□□□ -0.63
CDH1-209ENST00000566510 ATRXP46100 2492 aa11.14□□□□□ -0.63
CDH1-209ENST00000566510 HLA-DMBP28068 263 aa11.14□□□□□ -0.63
CDH1-209ENST00000566510 HIST1H1AQ02539 215 aaPredicted RBP11.14□□□□□ -0.63
CDH1-209ENST00000566510 FOXE3Q13461 319 aa11.14□□□□□ -0.63
CDH1-209ENST00000566510 FAM104BQ5XKR9 115 aa11.14□□□□□ -0.63
CDH1-209ENST00000566510 NDUFA3O95167 84 aa11.13□□□□□ -0.63
CDH1-209ENST00000566510 CKS2P33552 79 aa11.13□□□□□ -0.63
CDH1-209ENST00000566510 AMMECR1LQ6DCA0 310 aa11.13□□□□□ -0.63
CDH1-209ENST00000566510 DEFB125Q8N687 156 aa11.13□□□□□ -0.63
CDH1-209ENST00000566510 VGLL1Q99990 258 aa11.13□□□□□ -0.63
CDH1-209ENST00000566510 THYN1Q9P016 225 aa11.13□□□□□ -0.63
CDH1-209ENST00000566510 COX8AP10176 69 aa11.13□□□□□ -0.63
CDH1-209ENST00000566510 EGR2P11161 476 aaPredicted RBP11.13□□□□□ -0.63
CDH1-209ENST00000566510 RPL7P18124 248 aaKnown RBP11.13□□□□□ -0.63
CDH1-209ENST00000566510 RNF151Q2KHN1 245 aa11.13□□□□□ -0.63
CDH1-209ENST00000566510 MRPL51Q4U2R6 128 aaKnown RBP11.13□□□□□ -0.63
CDH1-209ENST00000566510 ZNF562Q6V9R5 426 aa11.13□□□□□ -0.63
CDH1-209ENST00000566510 ZNF493Q6ZR52 646 aa11.13□□□□□ -0.63
CDH1-209ENST00000566510 WFDC3Q8IUB2 231 aa11.13□□□□□ -0.63
CDH1-209ENST00000566510 F8W735 103 aaPredicted RBP11.12□□□□□ -0.63
CDH1-209ENST00000566510 CCL21O00585 134 aa11.12□□□□□ -0.63
CDH1-209ENST00000566510 ORM1P02763 201 aa11.12□□□□□ -0.63
CDH1-209ENST00000566510 SAPCD1Q5SSQ6 148 aa11.12□□□□□ -0.63
CDH1-209ENST00000566510 PRR25Q96S07 402 aa11.12□□□□□ -0.63
CDH1-209ENST00000566510 A0A096LNJ9 63 aa11.12□□□□□ -0.63
CDH1-209ENST00000566510 UQCRFS1P47985 274 aa11.12□□□□□ -0.63
CDH1-209ENST00000566510 CACNG7P62955 275 aa11.12□□□□□ -0.63
CDH1-209ENST00000566510 RHOGP84095 191 aa11.12□□□□□ -0.63
CDH1-209ENST00000566510 DYNAPQ8N1N2 210 aa11.12□□□□□ -0.63
CDH1-209ENST00000566510 GATD1Q8NB37 220 aa11.12□□□□□ -0.63
CDH1-209ENST00000566510 ZNF80P51504 273 aaPredicted RBP11.12□□□□□ -0.63
CDH1-209ENST00000566510 FER1L6-AS1Q8NA97 138 aa11.12□□□□□ -0.63
CDH1-209ENST00000566510 RABAC1Q9UI14 185 aa11.12□□□□□ -0.63
CDH1-209ENST00000566510 ANKRD39Q53RE8 183 aa11.11□□□□□ -0.63
CDH1-209ENST00000566510 IGF2RP11717 2491 aa11.11□□□□□ -0.63
CDH1-209ENST00000566510 PRTN3P24158 256 aa11.11□□□□□ -0.63
CDH1-209ENST00000566510 SPOCK3Q9BQ16 436 aa11.11□□□□□ -0.63
CDH1-209ENST00000566510 NPYP01303 97 aa11.1□□□□□ -0.63
CDH1-209ENST00000566510 CTSGP08311 255 aa11.1□□□□□ -0.63
CDH1-209ENST00000566510 TMEM11P17152 192 aa11.1□□□□□ -0.63
CDH1-209ENST00000566510 CDSNQ15517 529 aa11.1□□□□□ -0.63
CDH1-209ENST00000566510 C2orf91Q6ZV80 131 aa11.1□□□□□ -0.63
CDH1-209ENST00000566510 VMO1Q7Z5L0 202 aa11.1□□□□□ -0.63
CDH1-209ENST00000566510 TTC9CQ8N5M4 171 aa11.1□□□□□ -0.63
CDH1-209ENST00000566510 TMEM190Q8WZ59 177 aa11.1□□□□□ -0.63
CDH1-209ENST00000566510 MSRB1Q9NZV6 116 aa11.1□□□□□ -0.63
CDH1-209ENST00000566510 IGHV3-66A0A0C4DH42 116 aa11.1□□□□□ -0.63
CDH1-209ENST00000566510 RBX1P62877 108 aa11.1□□□□□ -0.63
CDH1-209ENST00000566510 C18orf15Q96N68 181 aa11.1□□□□□ -0.63
CDH1-209ENST00000566510 CD5LO43866 347 aa11.09□□□□□ -0.63
CDH1-209ENST00000566510 HBDP02042 147 aa11.09□□□□□ -0.63
CDH1-209ENST00000566510 PPIFP30405 207 aaKnown RBP11.09□□□□□ -0.63
CDH1-209ENST00000566510 BMI1P35226 326 aa11.09□□□□□ -0.63
CDH1-209ENST00000566510 ERCC8Q13216 396 aa11.09□□□□□ -0.63
CDH1-209ENST00000566510 SMAD5-AS1Q9Y6J3 95 aa11.09□□□□□ -0.63
CDH1-209ENST00000566510 IGHV3OR16-13A0A075B7E8 117 aa11.09□□□□□ -0.63
CDH1-209ENST00000566510 IGHV3-74A0A0B4J1X5 117 aa11.09□□□□□ -0.63
CDH1-209ENST00000566510 C7orf71A4D174 169 aa11.09□□□□□ -0.63
CDH1-209ENST00000566510 ODF3BA8MYP8 253 aa11.09□□□□□ -0.63
CDH1-209ENST00000566510 K7EP13 123 aa11.09□□□□□ -0.63
CDH1-209ENST00000566510 M0R1W7 72 aa11.09□□□□□ -0.63
CDH1-209ENST00000566510 SCGB2A1O75556 95 aa11.09□□□□□ -0.63
CDH1-209ENST00000566510 CCDC144NLQ6NUI1 221 aa11.09□□□□□ -0.63
CDH1-209ENST00000566510 K7ENP7 123 aa11.08□□□□□ -0.64
CDH1-209ENST00000566510 ECSCRQ19T08 205 aa11.08□□□□□ -0.64
CDH1-209ENST00000566510 TMEM97Q5BJF2 176 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms