RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, human

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN9-204	ENST00000564970	LYZL4	Q96KX0	146 aa		4.98	□□□□□ -1.61
PTPN9-204	ENST00000564970	NABP2	Q9BQ15	211 aa		4.98	□□□□□ -1.61
PTPN9-204	ENST00000564970	CALY	Q9NYX4	217 aa		4.98	□□□□□ -1.61
PTPN9-204	ENST00000564970	PEMT	Q9UBM1	199 aa		4.98	□□□□□ -1.61
PTPN9-204	ENST00000564970	LINC00527	Q9UJ94	153 aa		4.98	□□□□□ -1.61
PTPN9-204	ENST00000564970	CACNA1C	Q13936	2221 aa		4.98	□□□□□ -1.61
PTPN9-204	ENST00000564970	DMD	P11532	3685 aa		4.98	□□□□□ -1.61
PTPN9-204	ENST00000564970	TPR	P12270	2363 aa	Known RBP	4.98	□□□□□ -1.61
PTPN9-204	ENST00000564970	CHD9	Q3L8U1	2897 aa		4.98	□□□□□ -1.61
PTPN9-204	ENST00000564970	TRGV5	A0A0B4J1U4	118 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970		A0A0J9YW62	118 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	TRBV30	A0A0K0K1B3	111 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	ZNF785	A8K8V0	405 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	TMEM150C	B9EJG8	249 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970		K7ESM1	405 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	UPK2	O00526	184 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	CDX4	O14627	284 aa	Predicted RBP	4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	PRSS1	P07477	247 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	ELANE	P08246	267 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	CT62	P0C5K7	136 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	PRDX2	P32119	198 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	MYCNOS	P40205	109 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	HERVK_113	P61574	105 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	ERVK-16	P61578	105 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	RPL18A	Q02543	176 aa	Known RBP	4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	PIGY	Q3MUY2	71 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	DEFB134	Q4QY38	66 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	TMEM155	Q4W5P6	130 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	ZNF497	Q6ZNH5	498 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	ZNF329	Q86UD4	541 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	DAND5	Q8N907	189 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	CYB5D2	Q8WUJ1	264 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	TSACC	Q96A04	125 aa	Predicted RBP	4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	ZNF799	Q96GE5	643 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	PGLYRP4	Q96LB8	373 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	DEPP	Q9NTK1	212 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	FREM3	P0C091	2139 aa		4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	GCN1	Q92616	2671 aa	Known RBP	4.97	□□□□□ -1.61
PTPN9-204	ENST00000564970	EXPH5	Q8NEV8	1989 aa		4.96	□□□□□ -1.61
PTPN9-204	ENST00000564970	HCFC1	P51610	2035 aa		4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	ADAMTS9	Q9P2N4	1935 aa		4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	IGKV2D-26	A0A0A0MRZ7	120 aa		4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	IGKV1-6	A0A0C4DH72	117 aa		4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970		F8VRH5	84 aa		4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	BUB3	O43684	328 aa		4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	IGHG2	P01859	326 aa		4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	DUT	P33316	252 aa	Known RBP	4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	IFI27	P40305	119 aa	Predicted RBP	4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	TNFRSF4	P43489	277 aa		4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	SSR4	P51571	173 aa		4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	SUB1	P53999	127 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	TIRAP	P58753	221 aa		4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970		Q8IYB0	196 aa		4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	NABP1	Q96AH0	204 aa		4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	METTL26	Q96S19	204 aa		4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	DKK2	Q9UBU2	259 aa		4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	COL4A6	Q14031	1691 aa		4.96	□□□□□ -1.62
PTPN9-204	ENST00000564970	ZNF318	Q5VUA4	2279 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	IGKV1-12	A0A0C4DH73	117 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970		A0A0G2JNJ9	132 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	LINC00473	A8K010	186 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	TMEM178B	H3BS89	294 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	GFRA3	O60609	400 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	ZFAND5	O76080	213 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	IGKV1D-12	P01611	117 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	IGLV2-14	P01704	120 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	INAFM2	P0DMQ5	153 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	SPTB	P11277	2137 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	EDN2	P20800	178 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	CDA	P32320	146 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	EFNA4	P52798	201 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	EIF4EBP1	Q13541	118 aa	Predicted RBP	4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	C2orf82	Q6UX34	121 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	ZFP2	Q6ZN57	461 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970		Q6ZPA2	131 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	MIR17HG	Q75NE6	70 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970		Q8N8P6	123 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	SSMEM1	Q8WWF3	244 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	PAXX	Q9BUH6	204 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	DPH3P1	Q9H4G8	78 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	OTOR	Q9NRC9	128 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	BEX4	Q9NWD9	120 aa	Predicted RBP	4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970		Q9UFV3	132 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970		Q9Y3F1	56 aa		4.95	□□□□□ -1.62
PTPN9-204	ENST00000564970	PTPRS	Q13332	1948 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	NAV2	Q8IVL1	2488 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	TMEM89	A2RUT3	159 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	C15orf61	A6NNL5	157 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	KNCN	A6PVL3	124 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	CCL16	O15467	120 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	CFC1B	P0CG36	223 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	CFC1	P0CG37	223 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	DLX1	P56177	255 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	PCBD1	P61457	104 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	PMAIP1	Q13794	54 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	SCGB1D4	Q6XE38	83 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	UBALD1	Q8TB05	177 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	WFDC5	Q8TCV5	224 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	VSIG2	Q96IQ7	327 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms