RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 C15orf32Q32M92 178 aa12.89□□□□□ -0.35
CCNF-204ENST00000564333 Q71RC1 249 aaPredicted RBP12.89□□□□□ -0.35
CCNF-204ENST00000564333 ZNF502Q8TBZ5 544 aa12.89□□□□□ -0.35
CCNF-204ENST00000564333 AAMDCQ9H7C9 122 aa12.89□□□□□ -0.35
CCNF-204ENST00000564333 RABAC1Q9UI14 185 aa12.89□□□□□ -0.35
CCNF-204ENST00000564333 KLK9Q9UKQ9 250 aa12.89□□□□□ -0.35
CCNF-204ENST00000564333 TRAV40A0A0B4J280 105 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 IGHV1-69DA0A0B4J2H0 117 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 A0A1B0GW15 77 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 VWC2LB2RUY7 222 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 NDUFS8O00217 210 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 IGHV1-69P01742 117 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 COL8A1P27658 744 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 GPR183P32249 361 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 RHOGP84095 191 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 CLEC2AQ6UVW9 174 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 SSBP4Q9BWG4 385 aaPredicted RBP12.88□□□□□ -0.35
CCNF-204ENST00000564333 CBY1Q9Y3M2 126 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 M0R3E3 92 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 HAX1O00165 279 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 CHEK1O14757 476 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 RPL7P18124 248 aaKnown RBP12.88□□□□□ -0.35
CCNF-204ENST00000564333 FOXA3P55318 350 aaPredicted RBP12.88□□□□□ -0.35
CCNF-204ENST00000564333 PSG3Q16557 428 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 GTSF1Q8WW33 167 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 PSG8Q9UQ74 426 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 MOB4Q9Y3A3 225 aa12.88□□□□□ -0.35
CCNF-204ENST00000564333 PRB1P04280 392 aa12.87□□□□□ -0.35
CCNF-204ENST00000564333 ATP5J2P56134 94 aa12.87□□□□□ -0.35
CCNF-204ENST00000564333 TMEM219Q86XT9 240 aa12.87□□□□□ -0.35
CCNF-204ENST00000564333 STPG4Q8N801 248 aa12.87□□□□□ -0.35
CCNF-204ENST00000564333 ZC2HC1AQ96GY0 325 aa12.87□□□□□ -0.35
CCNF-204ENST00000564333 G3V318 75 aa12.86□□□□□ -0.35
CCNF-204ENST00000564333 PRB4P10163 310 aaPredicted RBP12.86□□□□□ -0.35
CCNF-204ENST00000564333 PSG9Q00887 426 aa12.86□□□□□ -0.35
CCNF-204ENST00000564333 RELQ04864 619 aaPredicted RBP12.86□□□□□ -0.35
CCNF-204ENST00000564333 Q6AWC8 147 aa12.86□□□□□ -0.35
CCNF-204ENST00000564333 LCN12Q6JVE5 192 aa12.86□□□□□ -0.35
CCNF-204ENST00000564333 TMEM191AQ9H0A3 160 aa12.86□□□□□ -0.35
CCNF-204ENST00000564333 LOC102724200A0A096LPH7 203 aaPredicted RBP12.86□□□□□ -0.35
CCNF-204ENST00000564333 LINC01548A6NM66 108 aa12.86□□□□□ -0.35
CCNF-204ENST00000564333 LEPROTL1O95214 131 aa12.86□□□□□ -0.35
CCNF-204ENST00000564333 S100A7P31151 101 aa12.86□□□□□ -0.35
CCNF-204ENST00000564333 C16orf54Q6UWD8 224 aa12.86□□□□□ -0.35
CCNF-204ENST00000564333 BRD3OSQ6XYD6 125 aa12.86□□□□□ -0.35
CCNF-204ENST00000564333 PGLYRP4Q96LB8 373 aa12.86□□□□□ -0.35
CCNF-204ENST00000564333 HSPB8Q9UJY1 196 aa12.86□□□□□ -0.35
CCNF-204ENST00000564333 IGHV4-30-2A0A087WSY4 118 aa12.85□□□□□ -0.35
CCNF-204ENST00000564333 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.85□□□□□ -0.35
CCNF-204ENST00000564333 IGHV3-35A0A0C4DH35 117 aa12.85□□□□□ -0.35
CCNF-204ENST00000564333 HSBP1L1C9JCN9 74 aa12.85□□□□□ -0.35
CCNF-204ENST00000564333 TFPI2P48307 235 aa12.85□□□□□ -0.35
CCNF-204ENST00000564333 ATOH7Q8N100 152 aa12.85□□□□□ -0.35
CCNF-204ENST00000564333 ZNF738Q8NE65 137 aa12.85□□□□□ -0.35
CCNF-204ENST00000564333 CCDC140Q96MF4 163 aa12.85□□□□□ -0.35
CCNF-204ENST00000564333 ASCL2Q99929 193 aa12.85□□□□□ -0.35
CCNF-204ENST00000564333 SERTM2A0A1B0GWG4 89 aa12.84□□□□□ -0.35
CCNF-204ENST00000564333 SYS1-DBNDD2H3BUS1 97 aa12.84□□□□□ -0.35
CCNF-204ENST00000564333 IGLL1P15814 213 aa12.84□□□□□ -0.35
CCNF-204ENST00000564333 CSN1S1P47710 185 aa12.84□□□□□ -0.35
CCNF-204ENST00000564333 RIGQ13278 110 aa12.84□□□□□ -0.35
CCNF-204ENST00000564333 PET117Q6UWS5 81 aa12.84□□□□□ -0.35
CCNF-204ENST00000564333 GATD1Q8NB37 220 aa12.84□□□□□ -0.35
CCNF-204ENST00000564333 ZFAND3Q9H8U3 227 aa12.84□□□□□ -0.35
CCNF-204ENST00000564333 IGHV3OR16-8A0A075B7F1 116 aa12.84□□□□□ -0.35
CCNF-204ENST00000564333 IGHV1-24A0A0C4DH33 117 aa12.84□□□□□ -0.35
CCNF-204ENST00000564333 OR4C46A6NHA9 309 aa12.84□□□□□ -0.35
CCNF-204ENST00000564333 MED13LQ71F56 2210 aa12.84□□□□□ -0.35
CCNF-204ENST00000564333 EEF1AKMT3Q96AZ1 226 aa12.84□□□□□ -0.35
CCNF-204ENST00000564333 URB1-AS1Q96HZ7 61 aa12.84□□□□□ -0.35
CCNF-204ENST00000564333 MAP1LC3CQ9BXW4 147 aa12.84□□□□□ -0.35
CCNF-204ENST00000564333 ZNF785A8K8V0 405 aa12.83□□□□□ -0.36
CCNF-204ENST00000564333 COX11Q9Y6N1 276 aa12.83□□□□□ -0.36
CCNF-204ENST00000564333 ZNF462Q96JM2 2506 aa12.83□□□□□ -0.36
CCNF-204ENST00000564333 AKAP6Q13023 2319 aa12.83□□□□□ -0.36
CCNF-204ENST00000564333 CSMD1Q96PZ7 3565 aa12.83□□□□□ -0.36
CCNF-204ENST00000564333 CLEC3BP05452 202 aa12.82□□□□□ -0.36
CCNF-204ENST00000564333 IGHV4-38-2P0DP08 117 aa12.82□□□□□ -0.36
CCNF-204ENST00000564333 CLEC19AQ6UXS0 136 aa12.82□□□□□ -0.36
CCNF-204ENST00000564333 PIFOQ8TCI5 191 aa12.82□□□□□ -0.36
CCNF-204ENST00000564333 MS4A6AQ9H2W1 248 aa12.82□□□□□ -0.36
CCNF-204ENST00000564333 SMAD5-AS1Q9Y6J3 95 aa12.82□□□□□ -0.36
CCNF-204ENST00000564333 A0A1B0GUT8 65 aa12.82□□□□□ -0.36
CCNF-204ENST00000564333 C8orf49Q96NF6 230 aa12.82□□□□□ -0.36
CCNF-204ENST00000564333 IGKV2-40A0A087WW87 121 aaPredicted RBP12.81□□□□□ -0.36
CCNF-204ENST00000564333 TRBV7-1A0A0A6YYK4 115 aa12.81□□□□□ -0.36
CCNF-204ENST00000564333 TRAV41A0A0B4J266 112 aa12.81□□□□□ -0.36
CCNF-204ENST00000564333 IGKV2D-40P01614 121 aaPredicted RBP12.81□□□□□ -0.36
CCNF-204ENST00000564333 CT45A10P0DMU9 189 aa12.81□□□□□ -0.36
CCNF-204ENST00000564333 HINT1P49773 126 aaPredicted RBP12.81□□□□□ -0.36
CCNF-204ENST00000564333 MEGF9Q9H1U4 602 aa12.81□□□□□ -0.36
CCNF-204ENST00000564333 APOHP02749 345 aaPredicted RBP12.8□□□□□ -0.36
CCNF-204ENST00000564333 MSMBP08118 114 aa12.8□□□□□ -0.36
CCNF-204ENST00000564333 RAB9AP51151 201 aa12.8□□□□□ -0.36
CCNF-204ENST00000564333 CRIP2P52943 208 aaPredicted RBP12.8□□□□□ -0.36
CCNF-204ENST00000564333 PTTG1IPP53801 180 aa12.8□□□□□ -0.36
CCNF-204ENST00000564333 MAJINQ3KP22 176 aa12.8□□□□□ -0.36
CCNF-204ENST00000564333 C19orf54Q5BKX5 351 aa12.8□□□□□ -0.36
CCNF-204ENST00000564333 PRR31Q5SQ13 230 aa12.8□□□□□ -0.36
CCNF-204ENST00000564333 CLEC5AQ9NY25 188 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms