RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 AIPO00170 330 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 SLC22A1O15245 554 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 GSTZ1O43708 216 aaPredicted RBP3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 LTAP01374 205 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 RBP4P02753 201 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 IGKV2-30P06310 120 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 UCHL1P09936 223 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 ZNF25P17030 456 aaPredicted RBP3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 MPV17P39210 176 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 NMUP48645 174 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 CMC4P56277 68 aaPredicted RBP3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 CAV3P56539 151 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 RPS28P62857 69 aaKnown RBP3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 SLC25A29Q8N8R3 303 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 ZDHHC22Q8N966 263 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 OR13C8Q8NGS7 320 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 OR5H2Q8NGV7 314 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 ZNF418Q8TF45 676 aaPredicted RBP3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 MALSU1Q96EH3 234 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 TMEM70Q9BUB7 260 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 COMMD5Q9GZQ3 224 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 NDUFB11Q9NX14 153 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 AMMECR1Q9Y4X0 333 aaPredicted RBP3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 ALPK2Q86TB3 2170 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 LAMA5O15230 3695 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 PRRC2CQ9Y520 2896 aaKnown RBP3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 DOPEY2Q9Y3R5 2298 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 FREM1Q5H8C1 2179 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 MEIKINA0A087WXM9 373 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 IGHV3-72A0A0B4J1Y9 119 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 CXorf1O96002 111 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 IGLV3-1P01715 115 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 MAS1P04201 325 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 MSMBP08118 114 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 RAB13P51153 203 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 TMBIM6P55061 237 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 FGF12P61328 243 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 HIST1H1AQ02539 215 aaPredicted RBP3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 DNLZQ5SXM8 178 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 Q6ZS49 121 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 SLC25A26Q70HW3 274 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 TRAPPC6BQ86SZ2 158 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 ZNF525Q8N782 197 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 KLHL30-AS1Q8NEE0 82 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 OR4K15Q8NH41 348 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 SGMS2Q8NHU3 365 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 AQP3Q92482 292 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 SMIM3Q9BZL3 60 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 BPESC1Q9GZL8 116 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 C8orf17Q9NRJ1 99 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 DSCAMO60469 2012 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 ITPR1Q14643 2758 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 ZZEF1O43149 2961 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 BORCS7-ASMTA0A0B4J1R7 106 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 IGKV1-12A0A0C4DH73 117 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 DUXBA0A1W2PPF3 345 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 M0R1W7 72 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 LHBP01229 141 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 IGKV1D-12P01611 117 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 CRISP2P16562 243 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 COL8A2P25067 703 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 NPY1RP25929 384 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 SRIP30626 198 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 BRS3P32247 399 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 SDC2P34741 201 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 TGFBR1P36897 503 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 MRPS10P82664 201 aaKnown RBP3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 Q8N9P0 234 aaPredicted RBP3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 DEFB108BQ8NET1 73 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 OR51T1Q8NGJ9 327 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 OR4A5Q8NH83 315 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 RPS4Y2Q8TD47 263 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 TMEM158Q8WZ71 300 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 H1FXQ92522 213 aaKnown RBP3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 ADAT3Q96EY9 351 aaPredicted RBP3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 HDHD3Q9BSH5 251 aaPredicted RBP3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 TTTY10Q9BZA0 68 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 OR2D2Q9H210 308 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 HMG20AQ9NP66 347 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 COA4Q9NYJ1 87 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 TAS2R8Q9NYW2 309 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 MRPS16Q9Y3D3 137 aaKnown RBP3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 ZFHX4Q86UP3 3567 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 TRBV19A0A075B6N1 114 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 A0A1B0GW64 132 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 TMEM30CPA0ZSE6 113 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 C9orf170A2RU37 121 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 IFITM5A6NNB3 132 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 OOSP1A8MZH6 123 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 C9JQL5 133 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 H7BYZ3 331 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 M0R129 80 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 KALRNO60229 2985 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 GNG7O60262 68 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 IGHV3-11P01762 117 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 FAUP35544 74 aaKnown RBP3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 EDDM3BP56851 147 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 GLIPR1L1Q6UWM5 242 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 IL34Q6ZMJ4 242 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 WDR86Q86TI4 376 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms