RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 TEX22C9J3V5 150 aa14.7□□□□□ -0.06
BBS4-204ENST00000562084 SRSF1Q07955 248 aaKnown RBP eCLIP14.7□□□□□ -0.06
BBS4-204ENST00000562084 ZMAT4Q9H898 229 aa14.7□□□□□ -0.06
BBS4-204ENST00000562084 SRSF2Q01130 221 aaKnown RBP14.69□□□□□ -0.06
BBS4-204ENST00000562084 PCP2Q8IVA1 136 aa14.69□□□□□ -0.06
BBS4-204ENST00000562084 AMN1Q8IY45 258 aa14.69□□□□□ -0.06
BBS4-204ENST00000562084 RITA1Q96K30 269 aa14.69□□□□□ -0.06
BBS4-204ENST00000562084 AAMDCQ9H7C9 122 aa14.69□□□□□ -0.06
BBS4-204ENST00000562084 CD40P25942 277 aa14.69□□□□□ -0.06
BBS4-204ENST00000562084 CKS2P33552 79 aa14.69□□□□□ -0.06
BBS4-204ENST00000562084 TMEM155Q4W5P6 130 aa14.69□□□□□ -0.06
BBS4-204ENST00000562084 TMEM133Q9H2Q1 129 aa14.69□□□□□ -0.06
BBS4-204ENST00000562084 NAV3Q8IVL0 2385 aa14.68□□□□□ -0.06
BBS4-204ENST00000562084 C17orf100A8MU93 164 aa14.68□□□□□ -0.06
BBS4-204ENST00000562084 TNFRSF13BO14836 293 aaPredicted RBP14.68□□□□□ -0.06
BBS4-204ENST00000562084 IGKV1-17P01599 117 aa14.68□□□□□ -0.06
BBS4-204ENST00000562084 RBP4P02753 201 aa14.68□□□□□ -0.06
BBS4-204ENST00000562084 PPP1R27Q86WC6 154 aa14.68□□□□□ -0.06
BBS4-204ENST00000562084 RNF5Q99942 180 aa14.68□□□□□ -0.06
BBS4-204ENST00000562084 VGLL1Q99990 258 aa14.68□□□□□ -0.06
BBS4-204ENST00000562084 ZFYVE26Q68DK2 2539 aa14.68□□□□□ -0.06
BBS4-204ENST00000562084 IGHV3-21A0A0B4J1V1 117 aa14.67□□□□□ -0.06
BBS4-204ENST00000562084 TMEM213A2RRL7 107 aa14.67□□□□□ -0.06
BBS4-204ENST00000562084 F8W1H4 67 aa14.67□□□□□ -0.06
BBS4-204ENST00000562084 TMEM178BH3BS89 294 aa14.67□□□□□ -0.06
BBS4-204ENST00000562084 MRPS12O15235 138 aaKnown RBP14.67□□□□□ -0.06
BBS4-204ENST00000562084 IGHV1-8P0DP01 117 aa14.67□□□□□ -0.06
BBS4-204ENST00000562084 BCL6BQ8N143 479 aaPredicted RBP14.67□□□□□ -0.06
BBS4-204ENST00000562084 SIGMAR1Q99720 223 aa14.67□□□□□ -0.06
BBS4-204ENST00000562084 NAA38Q9BRA0 125 aaKnown RBP14.67□□□□□ -0.06
BBS4-204ENST00000562084 TM2D2Q9BX73 214 aa14.67□□□□□ -0.06
BBS4-204ENST00000562084 MAP1LC3AQ9H492 121 aa14.67□□□□□ -0.06
BBS4-204ENST00000562084 INTS1Q8N201 2190 aaKnown RBP14.67□□□□□ -0.06
BBS4-204ENST00000562084 ZNF207O43670 478 aaKnown RBP14.67□□□□□ -0.06
BBS4-204ENST00000562084 SH2D1AO60880 128 aa14.67□□□□□ -0.06
BBS4-204ENST00000562084 EVI2AP22794 236 aa14.67□□□□□ -0.06
BBS4-204ENST00000562084 TAL2Q16559 108 aa14.67□□□□□ -0.06
BBS4-204ENST00000562084 Q71RC1 249 aaPredicted RBP14.67□□□□□ -0.06
BBS4-204ENST00000562084 WFDC8Q8IUA0 241 aa14.67□□□□□ -0.06
BBS4-204ENST00000562084 Q8NA96 180 aa14.67□□□□□ -0.06
BBS4-204ENST00000562084 NXT2Q9NPJ8 142 aaKnown RBP14.67□□□□□ -0.06
BBS4-204ENST00000562084 KAAG1Q9UBP8 84 aa14.67□□□□□ -0.06
BBS4-204ENST00000562084 SPTA1P02549 2419 aa14.67□□□□□ -0.06
BBS4-204ENST00000562084 FCN3O75636 299 aa14.66□□□□□ -0.06
BBS4-204ENST00000562084 FCER1GP30273 86 aa14.66□□□□□ -0.06
BBS4-204ENST00000562084 BMI1P35226 326 aa14.66□□□□□ -0.06
BBS4-204ENST00000562084 CCL8P80075 99 aa14.66□□□□□ -0.06
BBS4-204ENST00000562084 SPOCK3Q9BQ16 436 aa14.66□□□□□ -0.06
BBS4-204ENST00000562084 CHAC1Q9BUX1 264 aa14.66□□□□□ -0.06
BBS4-204ENST00000562084 WI2-2373I1.2A0A1W2PRP0 233 aa14.65□□□□□ -0.06
BBS4-204ENST00000562084 ATP5LO75964 103 aa14.65□□□□□ -0.06
BBS4-204ENST00000562084 NPYP01303 97 aa14.65□□□□□ -0.06
BBS4-204ENST00000562084 GCSHP23434 173 aa14.65□□□□□ -0.06
BBS4-204ENST00000562084 LOXP28300 417 aaPredicted RBP14.65□□□□□ -0.06
BBS4-204ENST00000562084 RPL24P83731 157 aaKnown RBP14.65□□□□□ -0.06
BBS4-204ENST00000562084 FOXI2Q6ZQN5 318 aa14.65□□□□□ -0.06
BBS4-204ENST00000562084 RNF125Q96EQ8 232 aa14.65□□□□□ -0.06
BBS4-204ENST00000562084 RAB1BQ9H0U4 201 aa14.65□□□□□ -0.06
BBS4-204ENST00000562084 KALRNO60229 2985 aa14.65□□□□□ -0.06
BBS4-204ENST00000562084 PPIAL4GP0DN37 164 aa14.65□□□□□ -0.06
BBS4-204ENST00000562084 KLRB1Q12918 225 aa14.65□□□□□ -0.06
BBS4-204ENST00000562084 C8orf49Q96NF6 230 aa14.65□□□□□ -0.06
BBS4-204ENST00000562084 DKK2Q9UBU2 259 aa14.65□□□□□ -0.06
BBS4-204ENST00000562084 SPENQ96T58 3664 aaKnown RBP14.64□□□□□ -0.07
BBS4-204ENST00000562084 PPIAL4CA0A0B4J2A2 164 aa14.64□□□□□ -0.07
BBS4-204ENST00000562084 TEX48A0A1B0GUV7 120 aa14.64□□□□□ -0.07
BBS4-204ENST00000562084 ODF1Q14990 250 aa14.64□□□□□ -0.07
BBS4-204ENST00000562084 CD300EQ496F6 205 aaPredicted RBP14.64□□□□□ -0.07
BBS4-204ENST00000562084 CLEC2AQ6UVW9 174 aa14.64□□□□□ -0.07
BBS4-204ENST00000562084 TMEM108Q6UXF1 575 aa14.64□□□□□ -0.07
BBS4-204ENST00000562084 ZNF491Q8N8L2 437 aa14.64□□□□□ -0.07
BBS4-204ENST00000562084 PHLDA1Q8WV24 401 aaPredicted RBP14.64□□□□□ -0.07
BBS4-204ENST00000562084 C17orf77Q96MU5 243 aa14.64□□□□□ -0.07
BBS4-204ENST00000562084 IGKCP01834 107 aa14.63□□□□□ -0.07
BBS4-204ENST00000562084 IGLC6P0CF74 106 aa14.63□□□□□ -0.07
BBS4-204ENST00000562084 C1orf185Q5T7R7 199 aa14.63□□□□□ -0.07
BBS4-204ENST00000562084 CNFNQ9BYD5 112 aa14.63□□□□□ -0.07
BBS4-204ENST00000562084 E9PLD3 99 aa14.63□□□□□ -0.07
BBS4-204ENST00000562084 FCGR2BP31994 310 aaPredicted RBP14.63□□□□□ -0.07
BBS4-204ENST00000562084 FXYD2P54710 66 aa14.63□□□□□ -0.07
BBS4-204ENST00000562084 TWIST1Q15672 202 aa14.63□□□□□ -0.07
BBS4-204ENST00000562084 PRSS57Q6UWY2 283 aa14.63□□□□□ -0.07
BBS4-204ENST00000562084 CEND1Q8N111 149 aa14.63□□□□□ -0.07
BBS4-204ENST00000562084 HHLA3Q9XRX5 114 aa14.63□□□□□ -0.07
BBS4-204ENST00000562084 IGHV3-72A0A0B4J1Y9 119 aa14.62□□□□□ -0.07
BBS4-204ENST00000562084 BBC3Q96PG8 261 aaPredicted RBP14.62□□□□□ -0.07
BBS4-204ENST00000562084 SVILO95425 2214 aa14.62□□□□□ -0.07
BBS4-204ENST00000562084 IGHV1-3A0A0C4DH29 117 aa14.61□□□□□ -0.07
BBS4-204ENST00000562084 A0A1B0GV72 72 aa14.61□□□□□ -0.07
BBS4-204ENST00000562084 K7EIM0 57 aa14.61□□□□□ -0.07
BBS4-204ENST00000562084 DPM2O94777 84 aa14.61□□□□□ -0.07
BBS4-204ENST00000562084 ZNF562Q6V9R5 426 aa14.61□□□□□ -0.07
BBS4-204ENST00000562084 ZNF48Q96MX3 618 aaPredicted RBP14.61□□□□□ -0.07
BBS4-204ENST00000562084 IGLV1-47P01700 117 aa14.61□□□□□ -0.07
BBS4-204ENST00000562084 APELAP0DMC3 54 aa14.61□□□□□ -0.07
BBS4-204ENST00000562084 AZU1P20160 251 aa14.61□□□□□ -0.07
BBS4-204ENST00000562084 CNTFRP26992 372 aa14.61□□□□□ -0.07
BBS4-204ENST00000562084 SPATA25Q9BR10 227 aa14.61□□□□□ -0.07
BBS4-204ENST00000562084 FAM215AQ9Y5M1 114 aa14.61□□□□□ -0.07
BBS4-204ENST00000562084 COL6A6A6NMZ7 2263 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms