RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 MCRIP2Q9BUT9 160 aaKnown RBP9.15□□□□□ -0.94
HERC1-214ENST00000561400 IGHG2P01859 326 aa9.15□□□□□ -0.95
HERC1-214ENST00000561400 LINC00310P59036 64 aa9.15□□□□□ -0.95
HERC1-214ENST00000561400 KRTDAPP60985 99 aa9.15□□□□□ -0.95
HERC1-214ENST00000561400 GNB1P62873 340 aa9.15□□□□□ -0.95
HERC1-214ENST00000561400 FOXE3Q13461 319 aa9.15□□□□□ -0.95
HERC1-214ENST00000561400 OR2K2Q8NGT1 345 aa9.15□□□□□ -0.95
HERC1-214ENST00000561400 ZC2HC1AQ96GY0 325 aa9.15□□□□□ -0.95
HERC1-214ENST00000561400 PRSS22Q9GZN4 317 aa9.15□□□□□ -0.95
HERC1-214ENST00000561400 ST20Q9HBF5 79 aa9.15□□□□□ -0.95
HERC1-214ENST00000561400 CACNG5Q9UF02 275 aa9.15□□□□□ -0.95
HERC1-214ENST00000561400 FBN1P35555 2871 aaKnown RBP9.14□□□□□ -0.95
HERC1-214ENST00000561400 A0A0G2JLM5 398 aa9.14□□□□□ -0.95
HERC1-214ENST00000561400 C7orf71A4D174 169 aa9.14□□□□□ -0.95
HERC1-214ENST00000561400 C15orf61A6NNL5 157 aa9.14□□□□□ -0.95
HERC1-214ENST00000561400 ZNF253O75346 499 aa9.14□□□□□ -0.95
HERC1-214ENST00000561400 SLC25A6P12236 298 aa9.14□□□□□ -0.95
HERC1-214ENST00000561400 GALR1P47211 349 aa9.14□□□□□ -0.95
HERC1-214ENST00000561400 P2RY1P47900 373 aa9.14□□□□□ -0.95
HERC1-214ENST00000561400 Q8N2B8 174 aa9.14□□□□□ -0.95
HERC1-214ENST00000561400 TTC9CQ8N5M4 171 aa9.14□□□□□ -0.95
HERC1-214ENST00000561400 NAA38Q9BRA0 125 aaKnown RBP9.14□□□□□ -0.95
HERC1-214ENST00000561400 FAM103A1Q9BTL3 118 aaKnown RBP9.14□□□□□ -0.95
HERC1-214ENST00000561400 TMEM14BQ9NUH8 114 aa9.14□□□□□ -0.95
HERC1-214ENST00000561400 TP53TG3Q9ULZ0 132 aa9.14□□□□□ -0.95
HERC1-214ENST00000561400 PIGBOS1A0A0B4J2F0 54 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 CGB1A6NKQ9 187 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 ST8SIA3O43173 380 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 EGR2P11161 476 aaPredicted RBP9.13□□□□□ -0.95
HERC1-214ENST00000561400 CCL20P78556 96 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 FXYD3Q14802 87 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 PMCHL1Q16048 86 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 FAM90A2PQ658T7 463 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 RNASEKQ6P5S7 137 aaKnown RBP9.13□□□□□ -0.95
HERC1-214ENST00000561400 OR4A16Q8NH70 328 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 PXMP4Q9Y6I8 212 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 TEX50A0A1B0GTY4 177 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 C9orf118A6NHY6 69 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 ATP6V0E1O15342 81 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 HMGB3O15347 200 aaKnown RBP9.13□□□□□ -0.95
HERC1-214ENST00000561400 ACTL6BO94805 426 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 OR10P1Q8NGE3 313 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 SRSF12Q8WXF0 261 aaKnown RBP9.13□□□□□ -0.95
HERC1-214ENST00000561400 DNAJC30Q96LL9 226 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 SPIN2AQ99865 258 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 SPIN2BQ9BPZ2 258 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 LINC00527Q9UJ94 153 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 FOXA2Q9Y261 457 aaPredicted RBP9.13□□□□□ -0.95
HERC1-214ENST00000561400 RNF114Q9Y508 228 aa9.13□□□□□ -0.95
HERC1-214ENST00000561400 A0A1B0GV50 99 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 LINC00869P0C866 280 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 RHOBP62745 196 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 OR9G4Q8NGQ1 327 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 FAM213BQ8TBF2 198 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 ARPC1AQ92747 370 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 AP1S3Q96PC3 154 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 SAMD10Q9BYL1 202 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 COMMD5Q9GZQ3 224 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 PRNDQ9UKY0 176 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 TRAPPC1Q9Y5R8 145 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 TRAV9-2A0A087WT02 112 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 PITX3O75364 302 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 NXPH3O95157 252 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 NHLRC4P0CG21 123 aaPredicted RBP9.12□□□□□ -0.95
HERC1-214ENST00000561400 APELAP0DMC3 54 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 HIST1H1EP10412 219 aaKnown RBP9.12□□□□□ -0.95
HERC1-214ENST00000561400 RPL12P30050 165 aaKnown RBP9.12□□□□□ -0.95
HERC1-214ENST00000561400 RPL27AP46776 148 aaKnown RBP9.12□□□□□ -0.95
HERC1-214ENST00000561400 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.12□□□□□ -0.95
HERC1-214ENST00000561400 RNF152Q8N8N0 203 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 OR2G3Q8NGZ4 309 aa9.12□□□□□ -0.95
HERC1-214ENST00000561400 BORCS7-ASMTA0A0B4J1R7 106 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 SERF1AO75920 110 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 NDUFA7O95182 113 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 IGF1P05019 195 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 LCNL1Q6ZST4 164 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 OR2T6Q8NHC8 308 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 KIR2DL5BQ8NHK3 375 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 LINC01006Q8NI28 216 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 TMEM126AQ9H061 195 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 C16orf95Q9H693 158 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 NDUFA4L2Q9NRX3 87 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 ZNF257Q9Y2Q1 563 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 TEX22C9J3V5 150 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 G3V318 75 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 REG1AP05451 166 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 HSPE1P61604 102 aaKnown RBP9.11□□□□□ -0.95
HERC1-214ENST00000561400 KRTAP24-1Q3LI83 254 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 SPINK9Q5DT21 86 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 CXorf66Q5JRM2 361 aaPredicted RBP9.11□□□□□ -0.95
HERC1-214ENST00000561400 ASPHD1Q5U4P2 390 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 OR1L8Q8NGR8 309 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 SGMS2Q8NHU3 365 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 TENM1Q9UKZ4 2725 aa9.11□□□□□ -0.95
HERC1-214ENST00000561400 GPX1P07203 203 aa9.1□□□□□ -0.95
HERC1-214ENST00000561400 VDAC2P45880 294 aaPredicted RBP9.1□□□□□ -0.95
HERC1-214ENST00000561400 CRIP2P52943 208 aaPredicted RBP9.1□□□□□ -0.95
HERC1-214ENST00000561400 TCTAP57738 103 aa9.1□□□□□ -0.95
HERC1-214ENST00000561400 IL15RAQ13261 267 aa9.1□□□□□ -0.95
HERC1-214ENST00000561400 C17orf112F2Z3M2 114 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms