RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.92□□□□□ -1.3
IDH3A-217ENST00000559889 HIST1H2BHQ93079 126 aa6.92□□□□□ -1.3
IDH3A-217ENST00000559889 WWC2-AS2Q96NR7 200 aa6.92□□□□□ -1.3
IDH3A-217ENST00000559889 HIST1H2BNQ99877 126 aa6.92□□□□□ -1.3
IDH3A-217ENST00000559889 HIST1H2BMQ99879 126 aa6.92□□□□□ -1.3
IDH3A-217ENST00000559889 SLC25A39Q9BZJ4 359 aaPredicted RBP6.92□□□□□ -1.3
IDH3A-217ENST00000559889 A0A0G2JLM5 398 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 ZNF320A2RRD8 509 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 TRBV12-3P01733 135 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 SLC25A5P05141 298 aaKnown RBP6.91□□□□□ -1.3
IDH3A-217ENST00000559889 MFAP4P55083 255 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 KLF5Q13887 457 aaPredicted RBP6.91□□□□□ -1.3
IDH3A-217ENST00000559889 TTC9CQ8N5M4 171 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 ASCL2Q99929 193 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 C21orf62Q9NYP8 219 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 SMAD5-AS1Q9Y6J3 95 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 IGHV3-35A0A0C4DH35 117 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 OR2T8A6NH00 312 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 NDUFB8O95169 186 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 CNN1P51911 297 aaKnown RBP6.91□□□□□ -1.3
IDH3A-217ENST00000559889 PDZD11Q5EBL8 140 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 ZNF600Q6ZNG1 722 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 RNASE7Q9H1E1 156 aaKnown RBP6.91□□□□□ -1.3
IDH3A-217ENST00000559889 SRD5A3Q9H8P0 318 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 FBXL7Q9UJT9 491 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 U3KQK5 164 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 SORL1Q92673 2214 aa6.91□□□□□ -1.3
IDH3A-217ENST00000559889 PEX7O00628 323 aa6.9□□□□□ -1.3
IDH3A-217ENST00000559889 UBE2CO00762 179 aa6.9□□□□□ -1.3
IDH3A-217ENST00000559889 IGLV1-51P01701 117 aa6.9□□□□□ -1.3
IDH3A-217ENST00000559889 GP9P14770 177 aa6.9□□□□□ -1.3
IDH3A-217ENST00000559889 FCGR2BP31994 310 aaPredicted RBP6.9□□□□□ -1.3
IDH3A-217ENST00000559889 PLP1P60201 277 aa6.9□□□□□ -1.3
IDH3A-217ENST00000559889 RNF125Q96EQ8 232 aa6.9□□□□□ -1.3
IDH3A-217ENST00000559889 TRBV9A0A0B4J1U6 114 aa6.9□□□□□ -1.31
IDH3A-217ENST00000559889 ISLRO14498 428 aa6.9□□□□□ -1.31
IDH3A-217ENST00000559889 TGOLN2O43493 480 aa6.9□□□□□ -1.31
IDH3A-217ENST00000559889 GGCTO75223 188 aaKnown RBP6.9□□□□□ -1.31
IDH3A-217ENST00000559889 UBE2G1P62253 170 aa6.9□□□□□ -1.31
IDH3A-217ENST00000559889 PRR27Q6MZM9 219 aa6.9□□□□□ -1.31
IDH3A-217ENST00000559889 SBSPONQ8IVN8 264 aa6.9□□□□□ -1.31
IDH3A-217ENST00000559889 LINC00518Q8N0U6 118 aa6.9□□□□□ -1.31
IDH3A-217ENST00000559889 USMG5Q96IX5 58 aa6.9□□□□□ -1.31
IDH3A-217ENST00000559889 PYGO2Q9BRQ0 406 aa6.9□□□□□ -1.31
IDH3A-217ENST00000559889 IGHV3OR16-8A0A075B7F1 116 aa6.89□□□□□ -1.31
IDH3A-217ENST00000559889 PCP4L1A6NKN8 68 aa6.89□□□□□ -1.31
IDH3A-217ENST00000559889 SPINK4O60575 86 aa6.89□□□□□ -1.31
IDH3A-217ENST00000559889 PRB4P10163 310 aaPredicted RBP6.89□□□□□ -1.31
IDH3A-217ENST00000559889 BAGE2Q86Y30 109 aa6.89□□□□□ -1.31
IDH3A-217ENST00000559889 Q8N1Y9 231 aa6.89□□□□□ -1.31
IDH3A-217ENST00000559889 Q9H3A6 140 aa6.89□□□□□ -1.31
IDH3A-217ENST00000559889 MRPL27Q9P0M9 148 aaKnown RBP6.89□□□□□ -1.31
IDH3A-217ENST00000559889 PEF1Q9UBV8 284 aaKnown RBP6.89□□□□□ -1.31
IDH3A-217ENST00000559889 DNAH7Q8WXX0 4024 aa6.89□□□□□ -1.31
IDH3A-217ENST00000559889 TRAV30A0A087WSZ9 112 aa6.89□□□□□ -1.31
IDH3A-217ENST00000559889 TOMM40O96008 361 aa6.89□□□□□ -1.31
IDH3A-217ENST00000559889 HIST1H1BP16401 226 aaKnown RBP6.89□□□□□ -1.31
IDH3A-217ENST00000559889 SYNJ2BPP57105 145 aa6.89□□□□□ -1.31
IDH3A-217ENST00000559889 USF2Q15853 346 aaPredicted RBP6.89□□□□□ -1.31
IDH3A-217ENST00000559889 C15orf32Q32M92 178 aa6.89□□□□□ -1.31
IDH3A-217ENST00000559889 IBA57Q5T440 356 aaKnown RBP6.89□□□□□ -1.31
IDH3A-217ENST00000559889 OR9G4Q8NGQ1 327 aa6.89□□□□□ -1.31
IDH3A-217ENST00000559889 C12orf57Q99622 126 aa6.89□□□□□ -1.31
IDH3A-217ENST00000559889 EPDR1Q9UM22 224 aa6.89□□□□□ -1.31
IDH3A-217ENST00000559889 LY96Q9Y6Y9 160 aa6.89□□□□□ -1.31
IDH3A-217ENST00000559889 FRMD6-AS1P0C7T7 363 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 TCL1AP56279 114 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 RHOGP84095 191 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 GFI1BQ5VTD9 330 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 BPIFA4PQ86YQ2 179 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 EXOC3-AS1Q8N2X6 119 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 CMTM2Q8TAZ6 248 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 IGF2BP2-AS1Q96M15 143 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 ZNF586Q9NXT0 402 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 IL36BQ9NZH7 164 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 FAM223BA6NKX1 122 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 F8W735 103 aaPredicted RBP6.88□□□□□ -1.31
IDH3A-217ENST00000559889 BMPR1BO00238 502 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 CA1P00915 261 aaPredicted RBP6.88□□□□□ -1.31
IDH3A-217ENST00000559889 IGLV2-8P01709 118 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 S100A9P06702 114 aaKnown RBP6.88□□□□□ -1.31
IDH3A-217ENST00000559889 GPR183P32249 361 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 TAS2R60P59551 318 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 RPEL1Q2QD12 228 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 FAM223AQ8IWN6 122 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 OR8I2Q8N0Y5 310 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 C17orf77Q96MU5 243 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 IMMP2LQ96T52 175 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 SHANK2-AS3Q9BTD1 123 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 TRAPPC1Q9Y5R8 145 aa6.88□□□□□ -1.31
IDH3A-217ENST00000559889 ZNF705GA8MUZ8 300 aaPredicted RBP6.87□□□□□ -1.31
IDH3A-217ENST00000559889 SCGB2A1O75556 95 aa6.87□□□□□ -1.31
IDH3A-217ENST00000559889 CSN3P07498 182 aa6.87□□□□□ -1.31
IDH3A-217ENST00000559889 HIST1H1EP10412 219 aaKnown RBP6.87□□□□□ -1.31
IDH3A-217ENST00000559889 HOXA5P20719 270 aa6.87□□□□□ -1.31
IDH3A-217ENST00000559889 YPEL3P61236 119 aaPredicted RBP6.87□□□□□ -1.31
IDH3A-217ENST00000559889 C5orf17Q8NAS9 161 aa6.87□□□□□ -1.31
IDH3A-217ENST00000559889 CHRDL1Q9BU40 450 aa6.87□□□□□ -1.31
IDH3A-217ENST00000559889 SIGLEC8Q9NYZ4 499 aa6.87□□□□□ -1.31
IDH3A-217ENST00000559889 V9GYV3 84 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms