RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 DAZ2Q13117 558 aaKnown RBP6.35□□□□□ -1.39
HDDC3-204ENST00000559834 GUK1Q16774 197 aa6.35□□□□□ -1.39
HDDC3-204ENST00000559834 GFI1BQ5VTD9 330 aa6.35□□□□□ -1.39
HDDC3-204ENST00000559834 C10orf113Q5VZT2 155 aa6.35□□□□□ -1.39
HDDC3-204ENST00000559834 Q6ZRG5 221 aa6.35□□□□□ -1.39
HDDC3-204ENST00000559834 ODF3Q96PU9 254 aa6.35□□□□□ -1.39
HDDC3-204ENST00000559834 DNAJC4Q9NNZ3 241 aa6.35□□□□□ -1.39
HDDC3-204ENST00000559834 PGPEP1Q9NXJ5 209 aa6.35□□□□□ -1.39
HDDC3-204ENST00000559834 GSKIPQ9P0R6 139 aa6.35□□□□□ -1.39
HDDC3-204ENST00000559834 V9GYH0 126 aa6.35□□□□□ -1.39
HDDC3-204ENST00000559834 DNAH17Q9UFH2 4485 aa6.34□□□□□ -1.39
HDDC3-204ENST00000559834 TRGV2A0A075B6R0 118 aa6.34□□□□□ -1.39
HDDC3-204ENST00000559834 CENPXA8MT69 81 aa6.34□□□□□ -1.39
HDDC3-204ENST00000559834 EREGO14944 169 aa6.34□□□□□ -1.39
HDDC3-204ENST00000559834 CCNKO75909 580 aa6.34□□□□□ -1.39
HDDC3-204ENST00000559834 NDUFB6O95139 128 aa6.34□□□□□ -1.39
HDDC3-204ENST00000559834 SNRPCP09234 159 aaKnown RBP6.34□□□□□ -1.39
HDDC3-204ENST00000559834 OR4E1P0C645 316 aa6.34□□□□□ -1.39
HDDC3-204ENST00000559834 PRB4P10163 310 aaPredicted RBP6.34□□□□□ -1.39
HDDC3-204ENST00000559834 HOXA5P20719 270 aa6.34□□□□□ -1.39
HDDC3-204ENST00000559834 KIR3DS1Q14943 382 aa6.34□□□□□ -1.39
HDDC3-204ENST00000559834 IAH1Q2TAA2 248 aaPredicted RBP6.34□□□□□ -1.39
HDDC3-204ENST00000559834 SPANXN2Q5MJ10 180 aa6.34□□□□□ -1.39
HDDC3-204ENST00000559834 ZBTB8BQ8NAP8 495 aaPredicted RBP6.34□□□□□ -1.39
HDDC3-204ENST00000559834 ZNF431Q8TF32 576 aaPredicted RBP6.34□□□□□ -1.39
HDDC3-204ENST00000559834 TMEM37Q8WXS4 190 aa6.34□□□□□ -1.39
HDDC3-204ENST00000559834 SDHCQ99643 169 aaPredicted RBP6.34□□□□□ -1.39
HDDC3-204ENST00000559834 CCDC32Q9BV29 185 aa6.34□□□□□ -1.39
HDDC3-204ENST00000559834 KRTAP1-5Q9BYS1 174 aa6.34□□□□□ -1.39
HDDC3-204ENST00000559834 ZNF586Q9NXT0 402 aa6.34□□□□□ -1.39
HDDC3-204ENST00000559834 RYR1P21817 5038 aa6.34□□□□□ -1.4
HDDC3-204ENST00000559834 TRAV12-3A0A0B4J271 114 aa6.33□□□□□ -1.4
HDDC3-204ENST00000559834 PRAC2D3DTV9 90 aa6.33□□□□□ -1.4
HDDC3-204ENST00000559834 J3KRW8 73 aa6.33□□□□□ -1.4
HDDC3-204ENST00000559834 L7N2F9 121 aa6.33□□□□□ -1.4
HDDC3-204ENST00000559834 PTTG1O95997 202 aa6.33□□□□□ -1.4
HDDC3-204ENST00000559834 SLC25A5P05141 298 aaKnown RBP6.33□□□□□ -1.4
HDDC3-204ENST00000559834 CT45A10P0DMU9 189 aa6.33□□□□□ -1.4
HDDC3-204ENST00000559834 KRTAP10-2P60368 255 aa6.33□□□□□ -1.4
HDDC3-204ENST00000559834 VAMP2P63027 116 aa6.33□□□□□ -1.4
HDDC3-204ENST00000559834 TRIQKQ629K1 86 aa6.33□□□□□ -1.4
HDDC3-204ENST00000559834 C12orf45Q8N5I9 185 aaPredicted RBP6.33□□□□□ -1.4
HDDC3-204ENST00000559834 ZNF680Q8NEM1 530 aa6.33□□□□□ -1.4
HDDC3-204ENST00000559834 OR1L4Q8NGR5 311 aa6.33□□□□□ -1.4
HDDC3-204ENST00000559834 SAT2Q96F10 170 aaPredicted RBP6.33□□□□□ -1.4
HDDC3-204ENST00000559834 C18orf15Q96N68 181 aa6.33□□□□□ -1.4
HDDC3-204ENST00000559834 PARD6GQ9BYG4 376 aaPredicted RBP6.33□□□□□ -1.4
HDDC3-204ENST00000559834 DNAH11Q96DT5 4516 aa6.33□□□□□ -1.4
HDDC3-204ENST00000559834 A0A096LPF7 62 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 C7orf66A4D0T2 115 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 EPM2AB3EWF7 344 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 NPIPB6E9PJ23 425 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 H3BQ15 152 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 H3BTX0 84 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 SLC17A3O00476 420 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 SIVA1O15304 175 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 ZNF253O75346 499 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 IGLC2P0DOY2 106 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 CAMLGP49069 296 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 DEFA1P59665 94 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 DEFA3P59666 94 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 CD300CQ08708 224 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 ARL16Q0P5N6 197 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 OPCMLQ14982 345 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 Q6ZTI0 123 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 MRPL53Q96EL3 112 aaKnown RBP6.32□□□□□ -1.4
HDDC3-204ENST00000559834 LINC00477Q96M19 166 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 PFDN5Q99471 154 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 MGST2Q99735 147 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 SRRQ9GZT4 340 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 C20orf85Q9H1P6 137 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 TMPRSS5Q9H3S3 457 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 GSN-AS1Q9NRJ2 163 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 FLVCR2Q9UPI3 526 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 PRELID1Q9Y255 219 aa6.32□□□□□ -1.4
HDDC3-204ENST00000559834 DYNC1H1Q14204 4646 aaKnown RBP6.31□□□□□ -1.4
HDDC3-204ENST00000559834 TRGV1A0A0A0MS02 117 aa6.31□□□□□ -1.4
HDDC3-204ENST00000559834 C7orf71A4D174 169 aa6.31□□□□□ -1.4
HDDC3-204ENST00000559834 PAX4O43316 350 aa6.31□□□□□ -1.4
HDDC3-204ENST00000559834 ZNF324O75467 553 aaPredicted RBP6.31□□□□□ -1.4
HDDC3-204ENST00000559834 MBPP02686 304 aaPredicted RBP6.31□□□□□ -1.4
HDDC3-204ENST00000559834 LINC00315P59091 139 aa6.31□□□□□ -1.4
HDDC3-204ENST00000559834 SLAQ13239 276 aa6.31□□□□□ -1.4
HDDC3-204ENST00000559834 ANXA2RQ3ZCQ2 193 aa6.31□□□□□ -1.4
HDDC3-204ENST00000559834 MORN5Q5VZ52 161 aa6.31□□□□□ -1.4
HDDC3-204ENST00000559834 NRARPQ7Z6K4 114 aa6.31□□□□□ -1.4
HDDC3-204ENST00000559834 NFE4Q86UQ8 179 aa6.31□□□□□ -1.4
HDDC3-204ENST00000559834 MITD1Q8WV92 249 aa6.31□□□□□ -1.4
HDDC3-204ENST00000559834 VSIG2Q96IQ7 327 aa6.31□□□□□ -1.4
HDDC3-204ENST00000559834 LINC00467Q9BRT7 94 aa6.31□□□□□ -1.4
HDDC3-204ENST00000559834 FUT9Q9Y231 359 aa6.31□□□□□ -1.4
HDDC3-204ENST00000559834 RCL1Q9Y2P8 373 aaKnown RBP6.31□□□□□ -1.4
HDDC3-204ENST00000559834 PKD1P98161 4303 aa6.31□□□□□ -1.4
HDDC3-204ENST00000559834 TRAV9-2A0A087WT02 112 aa6.3□□□□□ -1.4
HDDC3-204ENST00000559834 TRAV5A0A0B4J249 113 aa6.3□□□□□ -1.4
HDDC3-204ENST00000559834 LINC00854A0A1B0GVQ3 168 aa6.3□□□□□ -1.4
HDDC3-204ENST00000559834 MPDU1O75352 247 aa6.3□□□□□ -1.4
HDDC3-204ENST00000559834 IFNA5P01569 189 aa6.3□□□□□ -1.4
HDDC3-204ENST00000559834 NMBP08949 121 aa6.3□□□□□ -1.4
HDDC3-204ENST00000559834 IL7P13232 177 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms