RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 OR10J3Q5JRS4 329 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 ACTL10Q5JWF8 245 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 UBE2NLQ5JXB2 153 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 GLYATL3Q5SZD4 288 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 FAM19A5Q7Z5A7 132 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-212ENST00000557477 CMC1Q7Z7K0 106 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 LRP11Q86VZ4 500 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 OR8G5Q8NG78 346 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 OR8B12Q8NGG6 310 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 OR51A4Q8NGJ6 313 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 OR52P1PQ8NH57 321 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 MBD3L1Q8WWY6 194 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 OR5P2Q8WZ92 322 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 OR5P3Q8WZ94 311 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 STARD4Q96DR4 205 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 TVP23CQ96ET8 276 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 DERL3Q96Q80 235 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 SDF2Q99470 211 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 TMEM133Q9H2Q1 129 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 AK3Q9UIJ7 227 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 LSM2Q9Y333 95 aaKnown RBP2.87□□□□□ -1.95
PRPF39-212ENST00000557477 SOX21Q9Y651 276 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-212ENST00000557477 MDC1Q14676 2089 aaKnown RBP2.87□□□□□ -1.95
PRPF39-212ENST00000557477 POLEQ07864 2286 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 CPAMD8Q8IZJ3 1885 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 IGHV3-74A0A0B4J1X5 117 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 TRAV8-6A0A0B4J262 113 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 A0A0B4J2E0 115 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 A0A1B0GX12 115 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 TRDV1A0A1B0GX56 115 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 IRGMA1A4Y4 181 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 MEIS3P1A6NDR6 274 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 CD300LBA8K4G0 201 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 LYRM9A8MSI8 78 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 C9JAW5 83 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 SMKR1H3BMG3 65 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 CDC42EP2O14613 210 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 TAAR5O14804 337 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 SYNGR1O43759 233 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 GCM2O75603 506 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-212ENST00000557477 HRASP01112 189 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 KRASP01116 189 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 SEC11BP0C7V7 166 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 LIMS3P0CW19 117 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 LIMS4P0CW20 117 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 OPRM1P35372 400 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 FAUP35544 74 aaKnown RBP2.86□□□□□ -1.95
PRPF39-212ENST00000557477 G6PCP35575 357 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 LPAR6P43657 344 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 ZNF121P58317 390 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-212ENST00000557477 HERVK_113P61574 105 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 TNFAIP6P98066 277 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-212ENST00000557477 CATR1Q13166 79 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 DEFB116Q30KQ4 102 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 HBMQ6B0K9 141 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 CEMP1Q6PRD7 247 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-212ENST00000557477 DPPA3Q6W0C5 159 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 LINC00336Q6ZUF6 198 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 COMMD6Q7Z4G1 85 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 APRG1Q8IVJ8 170 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 TEX29Q8N6K0 151 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 C15orf56Q8N910 161 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 CNEP1R1Q8N9A8 125 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 ZFP62Q8NB50 900 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-212ENST00000557477 OR2M3Q8NG83 312 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 OR2K2Q8NGT1 345 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 OR4A5Q8NH83 315 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 CMTM2Q8TAZ6 248 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 OR51E1Q8TCB6 317 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 SMIM4Q8WVI0 70 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 EEF1AKMT3Q96AZ1 226 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 OR2A5Q96R48 311 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 GGTLC1Q9BX51 225 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 EIF5A2Q9GZV4 153 aaKnown RBP2.86□□□□□ -1.95
PRPF39-212ENST00000557477 ST20Q9HBF5 79 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 PRTFDC1Q9NRG1 225 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 IDI2-AS1Q9NZ38 188 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 HIGD1AQ9Y241 93 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 FAM215AQ9Y5M1 114 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 KCNE3Q9Y6H6 103 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 ZNF780BQ9Y6R6 833 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 DCHS2Q6V1P9 2916 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 CACNA1CQ13936 2221 aa2.86□□□□□ -1.95
PRPF39-212ENST00000557477 FLNAP21333 2647 aaKnown RBP2.85□□□□□ -1.95
PRPF39-212ENST00000557477 A0A1B0GVX0 72 aa2.85□□□□□ -1.95
PRPF39-212ENST00000557477 ZNF727A8MUV8 499 aa2.85□□□□□ -1.95
PRPF39-212ENST00000557477 FNDC10F2Z333 226 aa2.85□□□□□ -1.95
PRPF39-212ENST00000557477 H0YJW9 148 aa2.85□□□□□ -1.95
PRPF39-212ENST00000557477 H3BRM9 83 aa2.85□□□□□ -1.95
PRPF39-212ENST00000557477 RER1O15258 196 aa2.85□□□□□ -1.95
PRPF39-212ENST00000557477 DHRS3O75911 302 aa2.85□□□□□ -1.95
PRPF39-212ENST00000557477 OR2H2O95918 312 aa2.85□□□□□ -1.95
PRPF39-212ENST00000557477 EIF4EP06730 217 aaKnown RBP2.85□□□□□ -1.95
PRPF39-212ENST00000557477 SPTBP11277 2137 aa2.85□□□□□ -1.95
PRPF39-212ENST00000557477 BLVRBP30043 206 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-212ENST00000557477 ZNF93P35789 620 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-212ENST00000557477 FABP6P51161 128 aa2.85□□□□□ -1.95
PRPF39-212ENST00000557477 P2RX1P51575 399 aa2.85□□□□□ -1.95
PRPF39-212ENST00000557477 POLR2JP52435 117 aaKnown RBP2.85□□□□□ -1.95
PRPF39-212ENST00000557477 TAS2R46P59540 309 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms