RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 TRBV7-1A0A0A6YYK4 115 aa7.8□□□□□ -1.16
TMEM260-211ENST00000556648 BUB3O43684 328 aa7.8□□□□□ -1.16
TMEM260-211ENST00000556648 TRGV3P03979 118 aa7.8□□□□□ -1.16
TMEM260-211ENST00000556648 CSN1S1P47710 185 aa7.8□□□□□ -1.16
TMEM260-211ENST00000556648 KRTAP10-9P60411 292 aa7.8□□□□□ -1.16
TMEM260-211ENST00000556648 ERCC8Q13216 396 aa7.8□□□□□ -1.16
TMEM260-211ENST00000556648 FAM19A2Q8N3H0 131 aa7.8□□□□□ -1.16
TMEM260-211ENST00000556648 GFRA4Q9GZZ7 299 aa7.8□□□□□ -1.16
TMEM260-211ENST00000556648 TMSB15BA0A087X1C1 80 aa7.79□□□□□ -1.16
TMEM260-211ENST00000556648 M0QZ24 198 aa7.79□□□□□ -1.16
TMEM260-211ENST00000556648 SH2D1AO60880 128 aa7.79□□□□□ -1.16
TMEM260-211ENST00000556648 GPX1P07203 203 aa7.79□□□□□ -1.16
TMEM260-211ENST00000556648 ARMS2P0C7Q2 107 aa7.79□□□□□ -1.16
TMEM260-211ENST00000556648 COX6B1P14854 86 aa7.79□□□□□ -1.16
TMEM260-211ENST00000556648 ZNF80P51504 273 aaPredicted RBP7.79□□□□□ -1.16
TMEM260-211ENST00000556648 PAFAH1B2P68402 229 aa7.79□□□□□ -1.16
TMEM260-211ENST00000556648 RELQ04864 619 aaPredicted RBP7.79□□□□□ -1.16
TMEM260-211ENST00000556648 FBN2P35556 2912 aa7.79□□□□□ -1.16
TMEM260-211ENST00000556648 A0A087X0K7 114 aa7.79□□□□□ -1.16
TMEM260-211ENST00000556648 B4DSR2 109 aa7.79□□□□□ -1.16
TMEM260-211ENST00000556648 IGHV3-11P01762 117 aa7.79□□□□□ -1.16
TMEM260-211ENST00000556648 AMTP48728 403 aa7.79□□□□□ -1.16
TMEM260-211ENST00000556648 FOXA3P55318 350 aaPredicted RBP7.79□□□□□ -1.16
TMEM260-211ENST00000556648 TMEM95Q3KNT9 176 aa7.79□□□□□ -1.16
TMEM260-211ENST00000556648 KLK15Q9H2R5 256 aa7.79□□□□□ -1.16
TMEM260-211ENST00000556648 TRAV8-2A0A0B4J237 113 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 FAM223BA6NKX1 122 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 ZNF324O75467 553 aaPredicted RBP7.78□□□□□ -1.16
TMEM260-211ENST00000556648 ZNF705DP0CH99 300 aaPredicted RBP7.78□□□□□ -1.16
TMEM260-211ENST00000556648 ZNF705BP0CI00 300 aaPredicted RBP7.78□□□□□ -1.16
TMEM260-211ENST00000556648 DDTP30046 118 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 PPIFP30405 207 aaKnown RBP7.78□□□□□ -1.16
TMEM260-211ENST00000556648 KLF5Q13887 457 aaPredicted RBP7.78□□□□□ -1.16
TMEM260-211ENST00000556648 FAM209BQ5JX69 171 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 LCN12Q6JVE5 192 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 UNQ9165/PRO28630Q6UXU0 137 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 NIT1Q86X76 327 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 FAM223AQ8IWN6 122 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 SIGLECL1Q8N7X8 197 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 Q8N976 141 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 TMEM190Q8WZ59 177 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 URB1-AS1Q96HZ7 61 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 PRR25Q96S07 402 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 TPPP3Q9BW30 176 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 SPG11Q96JI7 2443 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 A8MWP6 167 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 IGHG2P01859 326 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 IGF1P05019 195 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 NTF3P20783 257 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 ARL3P36405 182 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 SSTP61278 116 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 TDRG1Q3Y452 100 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 METTL26Q96S19 204 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 NRN1Q9NPD7 142 aa7.78□□□□□ -1.16
TMEM260-211ENST00000556648 ZFYVE26Q68DK2 2539 aa7.77□□□□□ -1.17
TMEM260-211ENST00000556648 CRYBG3Q68DQ2 2970 aa7.77□□□□□ -1.17
TMEM260-211ENST00000556648 CELSR2Q9HCU4 2923 aa7.77□□□□□ -1.17
TMEM260-211ENST00000556648 MUC21A0A0G2JKD1 596 aa7.77□□□□□ -1.17
TMEM260-211ENST00000556648 MUC21A0A140T8X8 626 aa7.77□□□□□ -1.17
TMEM260-211ENST00000556648 SERTM2A0A1B0GWG4 89 aa7.77□□□□□ -1.17
TMEM260-211ENST00000556648 TSTD3H0UI37 97 aa7.77□□□□□ -1.17
TMEM260-211ENST00000556648 CT45A10P0DMU9 189 aa7.77□□□□□ -1.17
TMEM260-211ENST00000556648 DSCR9P59020 149 aa7.77□□□□□ -1.17
TMEM260-211ENST00000556648 KRTDAPP60985 99 aa7.77□□□□□ -1.17
TMEM260-211ENST00000556648 DEFB112Q30KQ8 113 aa7.77□□□□□ -1.17
TMEM260-211ENST00000556648 MUC21Q5SSG8 566 aa7.77□□□□□ -1.17
TMEM260-211ENST00000556648 RNASEKQ6P5S7 137 aaKnown RBP7.77□□□□□ -1.17
TMEM260-211ENST00000556648 SELENOKQ9Y6D0 94 aa7.77□□□□□ -1.17
TMEM260-211ENST00000556648 U3KQE9 123 aa7.77□□□□□ -1.17
TMEM260-211ENST00000556648 CSMD2Q7Z408 3487 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 FAM231BA6NCW3 169 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 SMAD7O15105 426 aaKnown RBP7.76□□□□□ -1.17
TMEM260-211ENST00000556648 IGHV4-59P01825 116 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 SLC25A16P16260 332 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 LINC01356Q8N9X3 169 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 C14orf144Q96I85 54 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 ZNF462Q96JM2 2506 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 LOC102724200A0A096LPH7 203 aaPredicted RBP7.76□□□□□ -1.17
TMEM260-211ENST00000556648 A0A1B0GUT8 65 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 TMEM189A5PLL7 270 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 RNF223E7ERA6 249 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 PF4V1P10720 104 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 PMCHL1Q16048 86 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 FAM162BQ5T6X4 162 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 C8orf86Q6ZUL3 223 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 IL17RELQ6ZVW7 336 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 ZNF575Q86XF7 245 aa7.76□□□□□ -1.17
TMEM260-211ENST00000556648 TMEM213A2RRL7 107 aa7.75□□□□□ -1.17
TMEM260-211ENST00000556648 DEFA6Q01524 100 aa7.75□□□□□ -1.17
TMEM260-211ENST00000556648 C1orf194Q5T5A4 169 aa7.75□□□□□ -1.17
TMEM260-211ENST00000556648 C10orf99Q6UWK7 81 aa7.75□□□□□ -1.17
TMEM260-211ENST00000556648 LYZL1Q6UWQ5 148 aa7.75□□□□□ -1.17
TMEM260-211ENST00000556648 COX8CQ7Z4L0 72 aa7.75□□□□□ -1.17
TMEM260-211ENST00000556648 C20orf173Q96LM9 149 aa7.75□□□□□ -1.17
TMEM260-211ENST00000556648 PSMG3-AS1Q96PY0 264 aa7.75□□□□□ -1.17
TMEM260-211ENST00000556648 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.74□□□□□ -1.17
TMEM260-211ENST00000556648 KIR2DL5BA0A0G2JN68 375 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 KIR2DL5BA0A0G2JPC4 375 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 C3orf79P0CE67 100 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 EDN2P20800 178 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms