RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 ERCC8Q13216 396 aa4.54□□□□□ -1.68
TMEM260-209ENST00000556079 PSG3Q16557 428 aa4.54□□□□□ -1.68
TMEM260-209ENST00000556079 VWC2Q2TAL6 325 aa4.54□□□□□ -1.68
TMEM260-209ENST00000556079 FAM222AQ5U5X8 452 aa4.54□□□□□ -1.68
TMEM260-209ENST00000556079 C10orf113Q5VZT2 155 aa4.54□□□□□ -1.68
TMEM260-209ENST00000556079 EBLN2Q6P2I7 272 aa4.54□□□□□ -1.68
TMEM260-209ENST00000556079 MIR17HGQ75NE6 70 aa4.54□□□□□ -1.68
TMEM260-209ENST00000556079 RPUSD4Q96CM3 377 aaKnown RBP4.54□□□□□ -1.68
TMEM260-209ENST00000556079 RNF126Q9BV68 326 aa4.54□□□□□ -1.68
TMEM260-209ENST00000556079 WFDC1Q9HC57 220 aa4.54□□□□□ -1.68
TMEM260-209ENST00000556079 SEPSECSQ9HD40 501 aaKnown RBP4.54□□□□□ -1.68
TMEM260-209ENST00000556079 RPRMQ9NS64 109 aa4.54□□□□□ -1.68
TMEM260-209ENST00000556079 SLC39A9Q9NUM3 307 aa4.54□□□□□ -1.68
TMEM260-209ENST00000556079 ZNF586Q9NXT0 402 aa4.54□□□□□ -1.68
TMEM260-209ENST00000556079 ALG5Q9Y673 324 aa4.54□□□□□ -1.68
TMEM260-209ENST00000556079 PXMP4Q9Y6I8 212 aa4.54□□□□□ -1.68
TMEM260-209ENST00000556079 IGHV4-4A0A075B6R2 117 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 DEFB131BA0A096LNP1 70 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 PLAC8L1A1L4L8 177 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 FNDC10F2Z333 226 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 BOLA2-SMG1P6H3BVE0 249 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 SSNA1O43805 119 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 NDUFB4O95168 129 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 CFDP00746 253 aaPredicted RBP4.53□□□□□ -1.68
TMEM260-209ENST00000556079 HTN1P15515 57 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 RPL7P18124 248 aaKnown RBP4.53□□□□□ -1.68
TMEM260-209ENST00000556079 B2MP61769 119 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 SELENOTP62341 195 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 RHOBP62745 196 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 OR8A1Q8NGG7 326 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 OR5C1Q8NGR4 320 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 C2CD4CQ8TF44 421 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 BLNKQ8WV28 456 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 PPP1R1CQ8WVI7 109 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 SAT2Q96F10 170 aaPredicted RBP4.53□□□□□ -1.68
TMEM260-209ENST00000556079 MARVELD1Q9BSK0 173 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 SLC25A2Q9BXI2 301 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 ZNF331Q9NQX6 463 aaPredicted RBP4.53□□□□□ -1.68
TMEM260-209ENST00000556079 MBD2Q9UBB5 411 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 DKK2Q9UBU2 259 aa4.53□□□□□ -1.68
TMEM260-209ENST00000556079 KLK5Q9Y337 293 aaPredicted RBP4.53□□□□□ -1.68
TMEM260-209ENST00000556079 YTHDF2Q9Y5A9 579 aaKnown RBP4.53□□□□□ -1.68
TMEM260-209ENST00000556079 IGKV2-40A0A087WW87 121 aaPredicted RBP4.52□□□□□ -1.69
TMEM260-209ENST00000556079 TRAV10A0A0B4J240 114 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 IGKV2D-40P01614 121 aaPredicted RBP4.52□□□□□ -1.69
TMEM260-209ENST00000556079 CT45A10P0DMU9 189 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 MEOX2P50222 304 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 Q5BKY6 102 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 PRR9Q5T870 116 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 LINC00299Q6ZSB3 139 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 EXOC3-AS1Q8N2X6 119 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 LRRC20Q8TCA0 184 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 RNF141Q8WVD5 230 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 ZNF503Q96F45 646 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 FAM167A-AS1Q96KT0 104 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 IGF2BP2-AS1Q96M15 143 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 GPR82Q96P67 336 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 GGACTQ9BVM4 153 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 NPCDR1Q9BY65 106 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 DNAJC4Q9NNZ3 241 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 GOLT1BQ9Y3E0 138 aa4.52□□□□□ -1.69
TMEM260-209ENST00000556079 M0R2N4 97 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 MPC2O95563 127 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 INSP01308 110 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 HBE1P02100 147 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 OR10J4P0C629 311 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 PVALBP20472 110 aaPredicted RBP4.51□□□□□ -1.69
TMEM260-209ENST00000556079 S100A11P31949 105 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 RPL29P47914 159 aaKnown RBP4.51□□□□□ -1.69
TMEM260-209ENST00000556079 NUTF2P61970 127 aaKnown RBP4.51□□□□□ -1.69
TMEM260-209ENST00000556079 TMEM41BQ5BJD5 291 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 GFI1BQ5VTD9 330 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 LGALS9CQ6DKI2 356 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 STX12Q86Y82 276 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 PHYHIPLQ96FC7 376 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 NEU1Q99519 415 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 TMEM208Q9BTX3 173 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 C1QTNF4Q9BXJ3 329 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 NMES1Q9C002 83 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 HRH4Q9H3N8 390 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 HSPB11Q9Y547 144 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 MUC4Q99102 2169 aa4.51□□□□□ -1.69
TMEM260-209ENST00000556079 IGLV2-18A0A075B6J9 118 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 TRBV19A0A075B6N1 114 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 TRAV12-3A0A0B4J271 114 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 E5RGE8 158 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 NPIPB6E9PJ23 425 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 HMGB3O15347 200 aaKnown RBP4.5□□□□□ -1.69
TMEM260-209ENST00000556079 PRAF2O60831 178 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 DUSP14O95147 198 aaKnown RBP4.5□□□□□ -1.69
TMEM260-209ENST00000556079 SPART-AS1P0CW21 52 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 DEFB130BP0DP73 79 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 DEFB130AP0DP74 79 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 RAB2AP61019 212 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 HBG1P69891 147 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 HBG2P69892 147 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 CD300CQ08708 224 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 BTN1A1Q13410 526 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 RRN3P1Q2M238 152 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms