RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 F6UB75 175 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 H3BMM0 161 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 SULT1C2O00338 296 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 ATP8B1O43520 1251 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 DHFRP00374 187 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 SERPINE2P07093 398 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 ZNF705DP0CH99 300 aaPredicted RBP2.4□□□□□ -2.03
ATXN3-234ENST00000555958 ZNF705BP0CI00 300 aaPredicted RBP2.4□□□□□ -2.03
ATXN3-234ENST00000555958 CCL18P55774 89 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 CMC4P56277 68 aaPredicted RBP2.4□□□□□ -2.03
ATXN3-234ENST00000555958 DHRS2Q13268 280 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 TMED1Q13445 227 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 FLOT2Q14254 428 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 CLINT1Q14677 625 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 ESRGQ1W209 222 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 KLK9Q2XQG4 91 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 YIF1BQ5BJH7 314 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 SPINK9Q5DT21 86 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 Q5W150 140 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 GLT8D1Q68CQ7 371 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 ZNF773Q6PK81 442 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 ZNF705AQ6ZN79 300 aaPredicted RBP2.4□□□□□ -2.03
ATXN3-234ENST00000555958 C1orf158Q8N1D5 194 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 ARRDC1Q8N5I2 433 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 GDPD1Q8N9F7 314 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 OR4A4PQ8NGN8 299 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 DCANP1Q8TF63 244 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 APH1BQ8WW43 257 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 DNAJC9Q8WXX5 260 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 SMIM19Q96E16 107 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 NRBF2Q96F24 287 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 OR10C1Q96KK4 312 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 DERL3Q96Q80 235 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 ATP5SQ99766 215 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 GINS4Q9BRT9 223 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 NXF2Q9GZY0 626 aaKnown RBP2.4□□□□□ -2.03
ATXN3-234ENST00000555958 GABARAPL1Q9H0R8 117 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 VSIRQ9H7M9 311 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 GEMIN7Q9H840 131 aaKnown RBP2.4□□□□□ -2.03
ATXN3-234ENST00000555958 C12orf4Q9NQ89 552 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 BABAM2Q9NXR7 383 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 MRPL36Q9P0J6 103 aaKnown RBP2.4□□□□□ -2.03
ATXN3-234ENST00000555958 KLK9Q9UKQ9 250 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 RBMX2Q9Y388 322 aaKnown RBP2.4□□□□□ -2.03
ATXN3-234ENST00000555958 PUS1Q9Y606 427 aaKnown RBP eCLIP2.4□□□□□ -2.03
ATXN3-234ENST00000555958 RFNGQ9Y644 331 aa2.4□□□□□ -2.03
ATXN3-234ENST00000555958 PKHD1L1Q86WI1 4243 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 FSIP2Q5CZC0 6907 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 COLCA2A8K830 154 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 UPK2O00526 184 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 CREBL2O60519 120 aaPredicted RBP2.39□□□□□ -2.03
ATXN3-234ENST00000555958 MT-CO2P00403 227 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 EIF4EP06730 217 aaKnown RBP2.39□□□□□ -2.03
ATXN3-234ENST00000555958 STAG3L3P0CL85 134 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 CELP19835 753 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 TAS2R43P59537 309 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 TPBGQ13641 420 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 KIAA0087Q14695 138 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 USF2Q15853 346 aaPredicted RBP2.39□□□□□ -2.03
ATXN3-234ENST00000555958 RBM48Q5RL73 367 aaKnown RBP2.39□□□□□ -2.03
ATXN3-234ENST00000555958 CNIH2Q6PI25 160 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 OR4B1Q8NGF8 309 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 OR4S2Q8NH73 311 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 DGCR14Q96DF8 476 aaKnown RBP2.39□□□□□ -2.03
ATXN3-234ENST00000555958 ADTRPQ96IZ2 230 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 SLC29A1Q99808 456 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 C7orf50Q9BRJ6 194 aaKnown RBP2.39□□□□□ -2.03
ATXN3-234ENST00000555958 NDFIP1Q9BT67 221 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 AUNIPQ9H7T9 357 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 POMPQ9Y244 141 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 PRELID3BQ9Y3B1 194 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 F11RQ9Y624 299 aaKnown RBP2.39□□□□□ -2.03
ATXN3-234ENST00000555958 DNAH8Q96JB1 4490 aa2.39□□□□□ -2.03
ATXN3-234ENST00000555958 A0A096LPF7 62 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 I3L2K1 104 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 GNG7O60262 68 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 HBE1P02100 147 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 TRAPPC2P0DI81 140 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 TRAPPC2BP0DI82 140 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 HTN1P15515 57 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 SUB1P53999 127 aaKnown RBP eCLIP2.38□□□□□ -2.03
ATXN3-234ENST00000555958 KRTAP10-4P60372 401 aaPredicted RBP2.38□□□□□ -2.03
ATXN3-234ENST00000555958 REG3AQ06141 175 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 MRPL23Q16540 153 aaKnown RBP2.38□□□□□ -2.03
ATXN3-234ENST00000555958 ACSM3Q53FZ2 586 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 HES5Q5TA89 166 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 MS4A15Q8N5U1 240 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 OR51H1Q8NH63 302 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 VSTM2AQ8TAG5 236 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 DEFB104AQ8WTQ1 72 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 MRPL48Q96GC5 212 aaKnown RBP2.38□□□□□ -2.03
ATXN3-234ENST00000555958 Q96MT0 163 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 LINC00052Q96N35 136 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 UQCC2Q9BRT2 126 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 COMMD5Q9GZQ3 224 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 OR51B2Q9Y5P1 312 aa2.38□□□□□ -2.03
ATXN3-234ENST00000555958 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
ATXN3-234ENST00000555958 TRAV12-2A0A075B6T6 113 aa2.37□□□□□ -2.03
ATXN3-234ENST00000555958 PLAC8L1A1L4L8 177 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms