RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ATP6V0BQ99437 205 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 SHANK2-AS3Q9BTD1 123 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 SLC25A39Q9BZJ4 359 aaPredicted RBP5.28□□□□□ -1.56
SLIRP-204ENST00000555890 LY96Q9Y6Y9 160 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 MDFIC2A0A1B0GVS7 189 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 LINC01548A6NM66 108 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 C9JCJ5 164 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 G3V318 75 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 H3BUA1 57 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 H7BYZ3 331 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 BRI3O95415 125 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 IGF1P05019 195 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 S100A9P06702 114 aaKnown RBP5.27□□□□□ -1.57
SLIRP-204ENST00000555890 CTSGP08311 255 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 CRYBB3P26998 211 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 GNG4P50150 75 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 CNN1P51911 297 aaKnown RBP5.27□□□□□ -1.57
SLIRP-204ENST00000555890 TAS2R60P59551 318 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 CFHR3Q02985 330 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 RBMY1FQ15415 496 aaKnown RBP5.27□□□□□ -1.57
SLIRP-204ENST00000555890 DEFB112Q30KQ8 113 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 C15orf32Q32M92 178 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 SERTAD4-AS1Q5TG53 156 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 ZNF600Q6ZNG1 722 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 C9orf139Q6ZV77 190 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 BPIFA4PQ86YQ2 179 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 FAM24BQ8N5W8 94 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 OR4F17Q8NGA8 305 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 ZNF502Q8TBZ5 544 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 HIST1H2BAQ96A08 127 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 ISOC2Q96AB3 205 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 MS4A10Q96PG2 267 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 MLXQ9UH92 298 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 RABAC1Q9UI14 185 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 SOX21Q9Y651 276 aaPredicted RBP5.27□□□□□ -1.57
SLIRP-204ENST00000555890 S4R3C0 116 aa5.27□□□□□ -1.57
SLIRP-204ENST00000555890 DNAH7Q8WXX0 4024 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 PGPA6NDG6 321 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 OR2T8A6NH00 312 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 C1orf196B1AJZ1 125 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 GGTLC3B5MD39 225 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 H3BRN7 92 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 BMPR1BO00238 502 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 TGOLN2O43493 480 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 FSHBP01225 129 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 IGHV3-23P01764 117 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 TRGV3P03979 118 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 SLC25A5P05141 298 aaKnown RBP5.26□□□□□ -1.57
SLIRP-204ENST00000555890 FOLR2P14207 255 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 GP9P14770 177 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 RAB5AP20339 215 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 GPR183P32249 361 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 RPL35P42766 123 aaKnown RBP5.26□□□□□ -1.57
SLIRP-204ENST00000555890 IER3P46695 156 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 RAB9AP51151 201 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 RAB5BP61020 215 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 RANP62826 216 aaKnown RBP5.26□□□□□ -1.57
SLIRP-204ENST00000555890 RELQ04864 619 aaPredicted RBP5.26□□□□□ -1.57
SLIRP-204ENST00000555890 KPRPQ5T749 579 aaPredicted RBP5.26□□□□□ -1.57
SLIRP-204ENST00000555890 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 ZNF343Q6P1L6 599 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 KCNIP4Q6PIL6 250 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 Q6YL49 198 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 LINC01551Q86U37 167 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 ZNF329Q86UD4 541 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 CMTM2Q8TAZ6 248 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 BLNKQ8WV28 456 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 USMG5Q96IX5 58 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 BTF3L4Q96K17 158 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 DERL1Q9BUN8 251 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 GNB4Q9HAV0 340 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 DKK2Q9UBU2 259 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 ZNF580Q9UK33 172 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 EPDR1Q9UM22 224 aa5.26□□□□□ -1.57
SLIRP-204ENST00000555890 A0A0G2JLM5 398 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 ZNF98A6NK75 572 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 USP17L23D6RBM5 183 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 NPIPB6E9PJ23 425 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 PEX7O00628 323 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 PRYO14603 147 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 IGHV4-59P01825 116 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 CRYBA1P05813 215 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 RPL7P18124 248 aaKnown RBP5.25□□□□□ -1.57
SLIRP-204ENST00000555890 SRP14P37108 136 aaKnown RBP5.25□□□□□ -1.57
SLIRP-204ENST00000555890 MYCNOSP40205 109 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 GALR1P47211 349 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 TPPP2P59282 170 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 UBE2G1P62253 170 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 FLI1Q01543 452 aaPredicted RBP5.25□□□□□ -1.57
SLIRP-204ENST00000555890 ELOBQ15370 118 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 USF2Q15853 346 aaPredicted RBP5.25□□□□□ -1.57
SLIRP-204ENST00000555890 LEMD1Q68G75 181 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 CLEC19AQ6UXS0 136 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 LYPD1Q8N2G4 141 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 C5orf17Q8NAS9 161 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 OR10G8Q8NGN5 311 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 OCC1Q8TAD7 63 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 YPEL4Q96NS1 127 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 IMMP2LQ96T52 175 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 CHRDL1Q9BU40 450 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 323.2 ms