RNA–Protein interactions for RNA: ENST00000555227.1

LINC01578-205, Transcript of long intergenic non-protein coding RNA 1578, human

TSL 5

Gene LINC01578, Length 1,078 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01578-205	ENST00000555227	ARHGEF12	Q9NZN5	1544 aa		0.92	□□□□□ -2.26
LINC01578-205	ENST00000555227	UBR2	Q8IWV8	1755 aa		0.92	□□□□□ -2.26
LINC01578-205	ENST00000555227	FREM3	P0C091	2139 aa		0.92	□□□□□ -2.26
LINC01578-205	ENST00000555227	ABCA5	Q8WWZ7	1642 aa		0.92	□□□□□ -2.26
LINC01578-205	ENST00000555227	EIF2AK4	Q9P2K8	1649 aa	Known RBP	0.92	□□□□□ -2.26
LINC01578-205	ENST00000555227	PRDM2	Q13029	1718 aa		0.92	□□□□□ -2.26
LINC01578-205	ENST00000555227	UHRF1BP1L	A0JNW5	1464 aa		0.92	□□□□□ -2.26
LINC01578-205	ENST00000555227	RALGAPB	Q86X10	1494 aa		0.92	□□□□□ -2.26
LINC01578-205	ENST00000555227	MYH3	P11055	1940 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	MYH13	Q9UKX3	1938 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	CUL7	Q14999	1698 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	BLM	P54132	1417 aa	Predicted RBP	0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	ARHGAP31	Q2M1Z3	1444 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	EPRS	P07814	1512 aa	Known RBP	0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	FAM135A	Q9P2D6	1515 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	MGAM	O43451	1857 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	CC2D2A	Q9P2K1	1620 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	BIVM-ERCC5	R4GMW8	1640 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	FAM107A	O95990	144 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	IFNA4	P05014	189 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	KLRD1	Q13241	179 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	PPP1R2P3	Q6NXS1	205 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	LYG2	Q86SG7	212 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	STX19	Q8N4C7	294 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227		Q8N6K4	173 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	HOPX	Q9BPY8	73 aa	Predicted RBP	0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	MAP1LC3B	Q9GZQ8	125 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	BOLA2	Q9H3K6	86 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	MRPL40	Q9NQ50	206 aa	Known RBP	0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	SAR1A	Q9NR31	198 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	OR52A1	Q9UKL2	312 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	MAP2	P11137	1827 aa	Known RBP	0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	LAMA4	Q16363	1823 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	CFTR	P13569	1480 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	GAPVD1	Q14C86	1478 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	MYH7	P12883	1935 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	SAMD9	Q5K651	1589 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	THOC2	Q8NI27	1593 aa	Known RBP	0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	KDM5A	P29375	1690 aa	Known RBP	0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	KIF21A	Q7Z4S6	1674 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	GCC2	Q8IWJ2	1684 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	CTTNBP2	Q8WZ74	1663 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	ITSN2	Q9NZM3	1697 aa		0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	ASCC3	Q8N3C0	2202 aa	Known RBP	0.91	□□□□□ -2.26
LINC01578-205	ENST00000555227	ABCC5	O15440	1437 aa		0.9	□□□□□ -2.26
LINC01578-205	ENST00000555227	PTPRG	P23470	1445 aa		0.9	□□□□□ -2.26
LINC01578-205	ENST00000555227	TRO	Q12816	1431 aa	Predicted RBP	0.9	□□□□□ -2.26
LINC01578-205	ENST00000555227	PPIP5K1	Q6PFW1	1433 aa		0.9	□□□□□ -2.26
LINC01578-205	ENST00000555227	NCOA3	Q9Y6Q9	1424 aa		0.9	□□□□□ -2.26
LINC01578-205	ENST00000555227	ABCC2	Q92887	1545 aa		0.9	□□□□□ -2.26
LINC01578-205	ENST00000555227	KIF14	Q15058	1648 aa		0.9	□□□□□ -2.26
LINC01578-205	ENST00000555227		A0A087WSZ3	146 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	TRAV27	A0A087WT01	109 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	IGLV3-32	A0A0A0MS00	114 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	SMIM31	A0A1B0GVY4	71 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	PVALEF	A0A1B0GWK0	134 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	MIF4GD	A9UHW6	222 aa	Known RBP	0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	TMEM238	C9JI98	176 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	PGRMC1	O00264	195 aa	Known RBP	0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	SNAPC5	O75971	98 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	CSN2	P05814	226 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	COX7C	P15954	63 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	S100A1	P23297	94 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	GLRX	P35754	106 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	EFNA4	P52798	201 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	TCTA	P57738	103 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	CCDC153	Q494R4	210 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	C1orf140	Q5VVS0	124 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	CTAGE3P	Q8IX95	158 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	MMGT1	Q8N4V1	131 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	MAGOHB	Q96A72	148 aa	Known RBP	0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	SELENOS	Q9BQE4	189 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	MED11	Q9P086	117 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	ASB4	Q9Y574	426 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	AP4S1	Q9Y587	144 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	TCOF1	Q13428	1488 aa	Known RBP	0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	TEX14	Q8IWB6	1497 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	KDM5C	P41229	1560 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227		E9PCH4	1651 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	ADGB	Q8N7X0	1667 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	CFAP43	Q8NDM7	1665 aa		0.9	□□□□□ -2.27
LINC01578-205	ENST00000555227	NSD3	Q9BZ95	1437 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	CLASP1	Q7Z460	1538 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	UGGT2	Q9NYU1	1516 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	NES	P48681	1621 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	BCORL1	Q5H9F3	1711 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	MYH1	P12882	1939 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	MYH4	Q9Y623	1939 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	N4BP2	Q86UW6	1770 aa	Predicted RBP	0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	SYNM	O15061	1565 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	PLXNC1	O60486	1568 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	MYOM2	P54296	1465 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	GRIN2A	Q12879	1464 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	MAGI1	Q96QZ7	1491 aa	Predicted RBP	0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	IFT140	Q96RY7	1462 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	FANCD2	Q9BXW9	1451 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	ARHGEF10	O15013	1369 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	RTL9	Q8NET4	1388 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	FAM25A	B3EWG3	89 aa		0.89	□□□□□ -2.27
LINC01578-205	ENST00000555227	FAM25C	B3EWG5	89 aa		0.89	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms