RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 AURKAIP1Q9NWT8 199 aaPredicted RBP7.56□□□□□ -1.2
SYNE2-215ENST00000554997 ARL2-SNX15V9GYD0 113 aa7.56□□□□□ -1.2
SYNE2-215ENST00000554997 NOTCH1P46531 2555 aa7.55□□□□□ -1.2
SYNE2-215ENST00000554997 A0A1B0GV50 99 aa7.55□□□□□ -1.2
SYNE2-215ENST00000554997 FAM74A7A6NL05 159 aa7.55□□□□□ -1.2
SYNE2-215ENST00000554997 PAGE4O60829 102 aa7.55□□□□□ -1.2
SYNE2-215ENST00000554997 CSN1S1P47710 185 aa7.55□□□□□ -1.2
SYNE2-215ENST00000554997 EBLN2Q6P2I7 272 aa7.55□□□□□ -1.2
SYNE2-215ENST00000554997 FOXI2Q6ZQN5 318 aa7.55□□□□□ -1.2
SYNE2-215ENST00000554997 ZNF738Q8NE65 137 aa7.55□□□□□ -1.2
SYNE2-215ENST00000554997 CITED4Q96RK1 184 aa7.55□□□□□ -1.2
SYNE2-215ENST00000554997 YTHDF2Q9Y5A9 579 aaKnown RBP7.55□□□□□ -1.2
SYNE2-215ENST00000554997 A0A0J9YX75 114 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 PRAC2D3DTV9 90 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 H3BMM0 161 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 M0R3E3 92 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 PRB2P02812 416 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-215ENST00000554997 NMBP08949 121 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 UBE2G2P60604 165 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 RAB14P61106 215 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 ZNF124Q15973 351 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 ACTL10Q5JWF8 245 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 CCDC28AQ8IWP9 274 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 OR8A1Q8NGG7 326 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 CMTM2Q8TAZ6 248 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 CLUHP3Q96NS8 147 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 TXNDC17Q9BRA2 123 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 WFDC10AQ9H1F0 79 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 TUBA4BQ9H853 241 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 MANBALQ9NQG1 85 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 GNG13Q9P2W3 67 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 EPDR1Q9UM22 224 aa7.54□□□□□ -1.2
SYNE2-215ENST00000554997 MEGF8Q7Z7M0 2845 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 RBAKDNA6NC62 111 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 KNCNA6PVL3 124 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 GGTLC3B5MD39 225 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 DIRC3C9JPN6 131 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 F6UB75 175 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 K7EIL1 84 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 DUSP14O95147 198 aaKnown RBP7.53□□□□□ -1.2
SYNE2-215ENST00000554997 IFNA1P01562 189 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 SLC25A5P05141 298 aaKnown RBP7.53□□□□□ -1.2
SYNE2-215ENST00000554997 IGHV4-30-4P0DP06 118 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 HLA-DRB4P13762 266 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 TAGLN2P37802 199 aaKnown RBP7.53□□□□□ -1.2
SYNE2-215ENST00000554997 DEFB1P60022 68 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 DEFB121Q5J5C9 76 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 GDF5OSQ5U4N7 250 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 CST9LP1Q5W188 147 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 LINC00322Q6ZN03 302 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-215ENST00000554997 STHQ8IWL8 128 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 C5orf17Q8NAS9 161 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 OR10J6PQ8NGY7 276 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 LINC00477Q96M19 166 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 TCEAL7Q9BRU2 100 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 SRD5A3Q9H8P0 318 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 HLA-DRB4X5D2U9 266 aa7.53□□□□□ -1.2
SYNE2-215ENST00000554997 SERTM2A0A1B0GWG4 89 aa7.52□□□□□ -1.21
SYNE2-215ENST00000554997 TCRAP04437 139 aa7.52□□□□□ -1.21
SYNE2-215ENST00000554997 ZNF705DP0CH99 300 aaPredicted RBP7.52□□□□□ -1.21
SYNE2-215ENST00000554997 ZNF705BP0CI00 300 aaPredicted RBP7.52□□□□□ -1.21
SYNE2-215ENST00000554997 CLLU1Q5K131 121 aa7.52□□□□□ -1.21
SYNE2-215ENST00000554997 C9orf47Q6ZRZ4 202 aa7.52□□□□□ -1.21
SYNE2-215ENST00000554997 TRPT1Q86TN4 253 aaKnown RBP7.52□□□□□ -1.21
SYNE2-215ENST00000554997 HIST1H2BAQ96A08 127 aa7.52□□□□□ -1.21
SYNE2-215ENST00000554997 AGPAT4-IT1Q9H0P7 198 aa7.52□□□□□ -1.21
SYNE2-215ENST00000554997 VAX2Q9UIW0 290 aa7.52□□□□□ -1.21
SYNE2-215ENST00000554997 LOC102724200A0A096LPH7 203 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-215ENST00000554997 RBMY1BA6NDE4 496 aaKnown RBP7.51□□□□□ -1.21
SYNE2-215ENST00000554997 RBMY1EA6NEQ0 496 aaKnown RBP7.51□□□□□ -1.21
SYNE2-215ENST00000554997 RBFOX3A6NFN3 312 aa7.51□□□□□ -1.21
SYNE2-215ENST00000554997 A8MTW9 85 aa7.51□□□□□ -1.21
SYNE2-215ENST00000554997 C11orf94C9JXX5 98 aa7.51□□□□□ -1.21
SYNE2-215ENST00000554997 NPIPB6E9PJ23 425 aa7.51□□□□□ -1.21
SYNE2-215ENST00000554997 F6UZH7 168 aa7.51□□□□□ -1.21
SYNE2-215ENST00000554997 RGS13O14921 159 aa7.51□□□□□ -1.21
SYNE2-215ENST00000554997 RBMY1DP0C7P1 496 aaKnown RBP7.51□□□□□ -1.21
SYNE2-215ENST00000554997 CNN1P51911 297 aaKnown RBP7.51□□□□□ -1.21
SYNE2-215ENST00000554997 DEFA6Q01524 100 aa7.51□□□□□ -1.21
SYNE2-215ENST00000554997 HAGHQ16775 308 aa7.51□□□□□ -1.21
SYNE2-215ENST00000554997 OR4B1Q8NGF8 309 aa7.51□□□□□ -1.21
SYNE2-215ENST00000554997 PCNPQ8WW12 178 aaKnown RBP7.51□□□□□ -1.21
SYNE2-215ENST00000554997 PPP1R14DQ9NXH3 145 aa7.51□□□□□ -1.21
SYNE2-215ENST00000554997 SORL1Q92673 2214 aa7.51□□□□□ -1.21
SYNE2-215ENST00000554997 KIR2DL5BA0A0G2JN68 375 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 KIR2DL5BA0A0G2JPC4 375 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 FBLL1A6NHQ2 334 aaKnown RBP7.5□□□□□ -1.21
SYNE2-215ENST00000554997 K7EQM0 130 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 CT45A10P0DMU9 189 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 PRB4P10163 310 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-215ENST00000554997 BCL2P10415 239 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 ATP5G3P48201 142 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 NUTF2P61970 127 aaKnown RBP7.5□□□□□ -1.21
SYNE2-215ENST00000554997 GNG5P63218 68 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 MEF2BQ02080 365 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-215ENST00000554997 HIST1H1AQ02539 215 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-215ENST00000554997 ERCC8Q13216 396 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 MORN3Q6PF18 240 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-215ENST00000554997 GOLT1AQ6ZVE7 132 aa7.5□□□□□ -1.21
SYNE2-215ENST00000554997 KIR2DL5AQ8N109 375 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms