RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 RNASE11Q8TAA1 199 aaKnown RBP2.39□□□□□ -2.03
PSEN1-211ENST00000554995 DCANP1Q8TF63 244 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 TMEM106AQ96A25 262 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 C2orf50Q96LR7 162 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 SCGB3A1Q96QR1 104 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 TVP23BQ9NYZ1 205 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 ERGIC3Q9Y282 383 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 IGSF10Q6WRI0 2623 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 FBN3Q75N90 2809 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 CXorf51AA0A1B0GTR3 108 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 TRAPPC13A5PLN9 417 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 MEIS3P1A6NDR6 274 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 CLDN25C9JDP6 229 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 E5RI56 91 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 HMGB3O15347 200 aaKnown RBP2.38□□□□□ -2.03
PSEN1-211ENST00000554995 NCALDP61601 193 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 DYNLT1P63172 113 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 SNCBQ16143 134 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 CCDC153Q494R4 210 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 MIR17HGQ75NE6 70 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 TMED4Q7Z7H5 227 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 LYG2Q86SG7 212 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 DEFB106AQ8N104 65 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 SPACA4Q8TDM5 124 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 NUP210Q8TEM1 1887 aaPredicted RBP2.38□□□□□ -2.03
PSEN1-211ENST00000554995 C11orf40Q8WZ69 217 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 PRRT1Q99946 306 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 TMEM106BQ9NUM4 274 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 PTPRSQ13332 1948 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 CFAP46Q8IYW2 2715 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 LOC400499M0QZD8 3231 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 FBN2P35556 2912 aa2.38□□□□□ -2.03
PSEN1-211ENST00000554995 UBR5O95071 2799 aaPredicted RBP2.38□□□□□ -2.03
PSEN1-211ENST00000554995 MYO9AB2RTY4 2548 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 CNOT1A5YKK6 2376 aaKnown RBP2.37□□□□□ -2.03
PSEN1-211ENST00000554995 MFSD11O43934 449 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 S1PR2O95136 353 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 NAPSAO96009 420 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 S100A4P26447 101 aaKnown RBP2.37□□□□□ -2.03
PSEN1-211ENST00000554995 VBP1P61758 197 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 C4orf33Q8N1A6 199 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 C10orf82Q8WW14 230 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 GPR146Q96CH1 333 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 HSPB9Q9BQS6 159 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 GINS4Q9BRT9 223 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 POPDC3Q9HBV1 291 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 BATF3Q9NR55 127 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 BAIAP2Q9UQB8 552 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 GINS2Q9Y248 185 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 DMXL2Q8TDJ6 3036 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 LAMA1P25391 3075 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 CEP295Q9C0D2 2601 aa2.37□□□□□ -2.03
PSEN1-211ENST00000554995 COL5A1P20908 1838 aaPredicted RBP2.36□□□□□ -2.03
PSEN1-211ENST00000554995 KIAA1549LQ6ZVL6 1849 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 TRAV4A0A0B4J268 109 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 LOC730098B7Z3J9 87 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 C1QBP02746 253 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 IGKV1-16P04430 117 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 CD52P31358 61 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 DNAJB13P59910 316 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 TMEM155Q4W5P6 130 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 LINC01554Q52M75 96 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 LCA10Q71F78 164 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 TAC4Q86UU9 113 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 KRTAP13-1Q8IUC0 172 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 CTAGE3PQ8IX95 158 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 HIST3H2BBQ8N257 126 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 GID8Q9NWU2 228 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 PLXNA2O75051 1894 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 OTOGLQ3ZCN5 2332 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 NUMA1Q14980 2115 aa2.36□□□□□ -2.03
PSEN1-211ENST00000554995 A0A0G2JND7 137 aa2.35□□□□□ -2.03
PSEN1-211ENST00000554995 LOC285095A0A1B0GVY8 99 aa2.35□□□□□ -2.03
PSEN1-211ENST00000554995 J3QKU1 62 aa2.35□□□□□ -2.03
PSEN1-211ENST00000554995 ORC5O43913 435 aa2.35□□□□□ -2.03
PSEN1-211ENST00000554995 BANF1O75531 89 aa2.35□□□□□ -2.03
PSEN1-211ENST00000554995 ATG12O94817 140 aa2.35□□□□□ -2.03
PSEN1-211ENST00000554995 C1QCP02747 245 aa2.35□□□□□ -2.03
PSEN1-211ENST00000554995 CLPSP04118 112 aa2.35□□□□□ -2.03
PSEN1-211ENST00000554995 SRIP30626 198 aa2.35□□□□□ -2.03
PSEN1-211ENST00000554995 ATP5G3P48201 142 aa2.35□□□□□ -2.03
PSEN1-211ENST00000554995 POU6F1Q14863 301 aa2.35□□□□□ -2.03
PSEN1-211ENST00000554995 NDUFA5Q16718 116 aa2.35□□□□□ -2.03
PSEN1-211ENST00000554995 ARHGAP11BQ3KRB8 267 aa2.35□□□□□ -2.03
PSEN1-211ENST00000554995 HOPXQ9BPY8 73 aaPredicted RBP2.35□□□□□ -2.03
PSEN1-211ENST00000554995 MRPL57Q9BQC6 102 aaKnown RBP2.35□□□□□ -2.03
PSEN1-211ENST00000554995 ZFC3H1O60293 1989 aaKnown RBP2.35□□□□□ -2.03
PSEN1-211ENST00000554995 MYOFQ9NZM1 2061 aa2.35□□□□□ -2.03
PSEN1-211ENST00000554995 HCRTO43612 131 aa2.34□□□□□ -2.03
PSEN1-211ENST00000554995 ZNF737O75373 536 aa2.34□□□□□ -2.03
PSEN1-211ENST00000554995 IFNA1P01562 189 aa2.34□□□□□ -2.03
PSEN1-211ENST00000554995 OGNP20774 298 aaKnown RBP2.34□□□□□ -2.03
PSEN1-211ENST00000554995 PSMD8P48556 350 aa2.34□□□□□ -2.03
PSEN1-211ENST00000554995 KRTAP21-3Q3LHN1 58 aa2.34□□□□□ -2.03
PSEN1-211ENST00000554995 LCN15Q6UWW0 184 aa2.34□□□□□ -2.03
PSEN1-211ENST00000554995 TRAPPC6BQ86SZ2 158 aa2.34□□□□□ -2.03
PSEN1-211ENST00000554995 STX12Q86Y82 276 aa2.34□□□□□ -2.03
PSEN1-211ENST00000554995 SIGLECL1Q8N7X8 197 aa2.34□□□□□ -2.03
PSEN1-211ENST00000554995 POP5Q969H6 163 aaKnown RBP2.34□□□□□ -2.03
PSEN1-211ENST00000554995 RNF122Q9H9V4 155 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms