RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 DENND4AQ7Z401 1863 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 LOXP28300 417 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 PRR30Q53SZ7 412 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 CHCHD5Q9BSY4 110 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 IGHV3-73A0A0B4J1V6 119 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 DEFB104AQ8WTQ1 72 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 COL4A3Q01955 1670 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 A0A0U1RRA0 63 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 TMEM95Q3KNT9 176 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 TEX36Q5VZQ5 186 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 NDUFB8O95169 186 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 ZNF134P52741 427 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 PIP4P1Q86T03 277 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 PIP4P2Q8N4L2 257 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 LINC00311Q8N616 119 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 FAM110DQ8TAY7 271 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 PLEKHB2Q96CS7 222 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 C20orf144Q9BQM9 153 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 LSM4Q9Y4Z0 139 aaKnown RBP12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 ABCA1O95477 2261 aa12.32□□□□□ -0.44
ARHGEF40-202ENST00000553709 SPTAN1Q13813 2472 aaKnown RBP12.31□□□□□ -0.44
ARHGEF40-202ENST00000553709 TRBV19A0A075B6N1 114 aa12.31□□□□□ -0.44
ARHGEF40-202ENST00000553709 MORN3Q6PF18 240 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF40-202ENST00000553709 DPH3Q96FX2 82 aa12.31□□□□□ -0.44
ARHGEF40-202ENST00000553709 DAZ1Q9NQZ3 744 aaKnown RBP12.31□□□□□ -0.44
ARHGEF40-202ENST00000553709 ZNF415Q09FC8 603 aa12.31□□□□□ -0.44
ARHGEF40-202ENST00000553709 V9GYV3 84 aa12.31□□□□□ -0.44
ARHGEF40-202ENST00000553709 USF3Q68DE3 2245 aa12.31□□□□□ -0.44
ARHGEF40-202ENST00000553709 UTRNP46939 3433 aa12.31□□□□□ -0.44
ARHGEF40-202ENST00000553709 YLPM1P49750 1951 aaKnown RBP12.31□□□□□ -0.44
ARHGEF40-202ENST00000553709 TNFRSF6BO95407 300 aa12.31□□□□□ -0.44
ARHGEF40-202ENST00000553709 TDGF1P3P51864 188 aa12.31□□□□□ -0.44
ARHGEF40-202ENST00000553709 UBE2E1P51965 193 aa12.31□□□□□ -0.44
ARHGEF40-202ENST00000553709 CMC4P56277 68 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF40-202ENST00000553709 WT1-ASQ06250 92 aa12.31□□□□□ -0.44
ARHGEF40-202ENST00000553709 IGLV3-9A0A075B6K5 115 aa12.3□□□□□ -0.44
ARHGEF40-202ENST00000553709 OVOL3O00110 214 aa12.3□□□□□ -0.44
ARHGEF40-202ENST00000553709 EREGO14944 169 aa12.3□□□□□ -0.44
ARHGEF40-202ENST00000553709 ATP6V0E1O15342 81 aa12.3□□□□□ -0.44
ARHGEF40-202ENST00000553709 Q8NFD4 153 aa12.3□□□□□ -0.44
ARHGEF40-202ENST00000553709 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-202ENST00000553709 TMEM213A2RRL7 107 aa12.3□□□□□ -0.44
ARHGEF40-202ENST00000553709 M0R2P5 195 aa12.3□□□□□ -0.44
ARHGEF40-202ENST00000553709 IGHV2-5P01817 119 aa12.3□□□□□ -0.44
ARHGEF40-202ENST00000553709 CACNA1BQ00975 2339 aa12.3□□□□□ -0.44
ARHGEF40-202ENST00000553709 TEX43Q6ZNM6 134 aa12.3□□□□□ -0.44
ARHGEF40-202ENST00000553709 DTX1Q86Y01 620 aa12.3□□□□□ -0.44
ARHGEF40-202ENST00000553709 FAM231DQ6ZW35 169 aa12.3□□□□□ -0.44
ARHGEF40-202ENST00000553709 TECTAO75443 2155 aa12.29□□□□□ -0.44
ARHGEF40-202ENST00000553709 ZNF114Q8NC26 417 aa12.29□□□□□ -0.44
ARHGEF40-202ENST00000553709 K7ENP7 123 aa12.29□□□□□ -0.44
ARHGEF40-202ENST00000553709 SAP30O75446 220 aa12.29□□□□□ -0.44
ARHGEF40-202ENST00000553709 RPL36AP83881 106 aaKnown RBP12.29□□□□□ -0.44
ARHGEF40-202ENST00000553709 NSUN5P1Q3KNT7 163 aa12.29□□□□□ -0.44
ARHGEF40-202ENST00000553709 RPL36ALQ969Q0 106 aaKnown RBP12.29□□□□□ -0.44
ARHGEF40-202ENST00000553709 UBE2V1Q13404 147 aa12.29□□□□□ -0.44
ARHGEF40-202ENST00000553709 KIR3DS1Q14943 382 aa12.29□□□□□ -0.44
ARHGEF40-202ENST00000553709 RNF166Q96A37 237 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF40-202ENST00000553709 C8orf49Q96NF6 230 aa12.29□□□□□ -0.44
ARHGEF40-202ENST00000553709 PRSS46E5RG02 174 aa12.28□□□□□ -0.44
ARHGEF40-202ENST00000553709 MMP23AO75900 390 aa12.28□□□□□ -0.44
ARHGEF40-202ENST00000553709 NBL1P41271 181 aa12.28□□□□□ -0.44
ARHGEF40-202ENST00000553709 FAM104BQ5XKR9 115 aa12.28□□□□□ -0.44
ARHGEF40-202ENST00000553709 CADP27708 2225 aa12.28□□□□□ -0.44
ARHGEF40-202ENST00000553709 TRGV1A0A0A0MS02 117 aa12.28□□□□□ -0.44
ARHGEF40-202ENST00000553709 CD5LO43866 347 aa12.28□□□□□ -0.44
ARHGEF40-202ENST00000553709 IL17RELQ6ZVW7 336 aa12.28□□□□□ -0.44
ARHGEF40-202ENST00000553709 A0A087WWL8 130 aa12.27□□□□□ -0.44
ARHGEF40-202ENST00000553709 C11orf52Q96A22 123 aa12.27□□□□□ -0.44
ARHGEF40-202ENST00000553709 TPSG1Q9NRR2 321 aa12.27□□□□□ -0.44
ARHGEF40-202ENST00000553709 SSC4DQ8WTU2 575 aa12.27□□□□□ -0.44
ARHGEF40-202ENST00000553709 PRADC1Q9BSG0 188 aa12.27□□□□□ -0.44
ARHGEF40-202ENST00000553709 SMIM27A0A1W2PRY6 76 aa12.27□□□□□ -0.45
ARHGEF40-202ENST00000553709 LYPD6BQ8NI32 183 aa12.27□□□□□ -0.45
ARHGEF40-202ENST00000553709 FAM215AQ9Y5M1 114 aa12.27□□□□□ -0.45
ARHGEF40-202ENST00000553709 TTC28Q96AY4 2481 aa12.27□□□□□ -0.45
ARHGEF40-202ENST00000553709 SLC25A16P16260 332 aa12.27□□□□□ -0.45
ARHGEF40-202ENST00000553709 STPG4Q8N801 248 aa12.27□□□□□ -0.45
ARHGEF40-202ENST00000553709 DOCK11Q5JSL3 2073 aa12.27□□□□□ -0.45
ARHGEF40-202ENST00000553709 TRAV8-4A0A0B4J246 113 aa12.26□□□□□ -0.45
ARHGEF40-202ENST00000553709 LINC00158P58513 81 aa12.26□□□□□ -0.45
ARHGEF40-202ENST00000553709 SLAQ13239 276 aa12.26□□□□□ -0.45
ARHGEF40-202ENST00000553709 ATXN8Q156A1 80 aa12.26□□□□□ -0.45
ARHGEF40-202ENST00000553709 RUSC1-AS1Q66K80 236 aa12.26□□□□□ -0.45
ARHGEF40-202ENST00000553709 TMEM86BQ8N661 226 aa12.26□□□□□ -0.45
ARHGEF40-202ENST00000553709 CHAC1Q9BUX1 264 aa12.26□□□□□ -0.45
ARHGEF40-202ENST00000553709 TMEM14CQ9P0S9 112 aa12.26□□□□□ -0.45
ARHGEF40-202ENST00000553709 SLC25A20O43772 301 aa12.26□□□□□ -0.45
ARHGEF40-202ENST00000553709 GHRHP01286 108 aa12.26□□□□□ -0.45
ARHGEF40-202ENST00000553709 POU2AF1Q16633 256 aa12.26□□□□□ -0.45
ARHGEF40-202ENST00000553709 RNF138Q8WVD3 245 aa12.26□□□□□ -0.45
ARHGEF40-202ENST00000553709 PRSS33Q8NF86 280 aa12.26□□□□□ -0.45
ARHGEF40-202ENST00000553709 SLX1AQ9BQ83 275 aa12.26□□□□□ -0.45
ARHGEF40-202ENST00000553709 CKS1BP61024 79 aa12.25□□□□□ -0.45
ARHGEF40-202ENST00000553709 Q6ZWC4 215 aa12.25□□□□□ -0.45
ARHGEF40-202ENST00000553709 LINC01356Q8N9X3 169 aa12.25□□□□□ -0.45
ARHGEF40-202ENST00000553709 GTSF1LQ9H1H1 148 aa12.25□□□□□ -0.45
ARHGEF40-202ENST00000553709 H3BRN7 92 aa12.25□□□□□ -0.45
ARHGEF40-202ENST00000553709 INSP01308 110 aa12.25□□□□□ -0.45
ARHGEF40-202ENST00000553709 NPC2P61916 151 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms