RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 TBPP20226 339 aa9.08□□□□□ -0.96
PRPF39-204ENST00000553605 TGFBR1P36897 503 aa9.08□□□□□ -0.96
PRPF39-204ENST00000553605 MORN5Q5VZ52 161 aa9.08□□□□□ -0.96
PRPF39-204ENST00000553605 LCN15Q6UWW0 184 aa9.08□□□□□ -0.96
PRPF39-204ENST00000553605 BLNKQ8WV28 456 aa9.08□□□□□ -0.96
PRPF39-204ENST00000553605 TXNDC17Q9BRA2 123 aa9.08□□□□□ -0.96
PRPF39-204ENST00000553605 SLC50A1Q9BRV3 221 aa9.08□□□□□ -0.96
PRPF39-204ENST00000553605 KRTAP9-2Q9BYQ4 174 aa9.08□□□□□ -0.96
PRPF39-204ENST00000553605 MRPS12O15235 138 aaKnown RBP9.07□□□□□ -0.96
PRPF39-204ENST00000553605 APOA1P02647 267 aa9.07□□□□□ -0.96
PRPF39-204ENST00000553605 IL5P05113 134 aa9.07□□□□□ -0.96
PRPF39-204ENST00000553605 SLC25A5P05141 298 aaKnown RBP9.07□□□□□ -0.96
PRPF39-204ENST00000553605 SNRPCP09234 159 aaKnown RBP9.07□□□□□ -0.96
PRPF39-204ENST00000553605 AKR1C4P17516 323 aa9.07□□□□□ -0.96
PRPF39-204ENST00000553605 TNFSF8P32971 234 aa9.07□□□□□ -0.96
PRPF39-204ENST00000553605 IBA57Q5T440 356 aaKnown RBP9.07□□□□□ -0.96
PRPF39-204ENST00000553605 ACOT7LQ6ZUV0 252 aa9.07□□□□□ -0.96
PRPF39-204ENST00000553605 IQCF2Q8IXL9 164 aa9.07□□□□□ -0.96
PRPF39-204ENST00000553605 PRR13Q9NZ81 148 aa9.07□□□□□ -0.96
PRPF39-204ENST00000553605 COMMD3Q9UBI1 195 aa9.07□□□□□ -0.96
PRPF39-204ENST00000553605 C7orf71A4D174 169 aa9.06□□□□□ -0.96
PRPF39-204ENST00000553605 PRSS46E5RG02 174 aa9.06□□□□□ -0.96
PRPF39-204ENST00000553605 IAPPP10997 89 aa9.06□□□□□ -0.96
PRPF39-204ENST00000553605 AKR1C1Q04828 323 aa9.06□□□□□ -0.96
PRPF39-204ENST00000553605 CYP2G1PQ6ZSU1 146 aa9.06□□□□□ -0.96
PRPF39-204ENST00000553605 LYZL2Q7Z4W2 148 aa9.06□□□□□ -0.96
PRPF39-204ENST00000553605 S100A7AQ86SG5 101 aa9.06□□□□□ -0.96
PRPF39-204ENST00000553605 A0A0B4J2A0 478 aa9.05□□□□□ -0.96
PRPF39-204ENST00000553605 RBFOX3A6NFN3 312 aa9.05□□□□□ -0.96
PRPF39-204ENST00000553605 RAB3DO95716 219 aa9.05□□□□□ -0.96
PRPF39-204ENST00000553605 IGLV2-11P01706 119 aa9.05□□□□□ -0.96
PRPF39-204ENST00000553605 PLP1P60201 277 aa9.05□□□□□ -0.96
PRPF39-204ENST00000553605 OR52I2Q8NH67 350 aa9.05□□□□□ -0.96
PRPF39-204ENST00000553605 SLC25A31Q9H0C2 315 aa9.05□□□□□ -0.96
PRPF39-204ENST00000553605 MTFP1Q9UDX5 166 aa9.05□□□□□ -0.96
PRPF39-204ENST00000553605 SHPKQ9UHJ6 478 aa9.05□□□□□ -0.96
PRPF39-204ENST00000553605 TP53TG3Q9ULZ0 132 aa9.05□□□□□ -0.96
PRPF39-204ENST00000553605 KCNIP3Q9Y2W7 256 aa9.05□□□□□ -0.96
PRPF39-204ENST00000553605 C9JCJ5 164 aa9.04□□□□□ -0.96
PRPF39-204ENST00000553605 CCNKO75909 580 aa9.04□□□□□ -0.96
PRPF39-204ENST00000553605 IGHV3-30P01768 117 aa9.04□□□□□ -0.96
PRPF39-204ENST00000553605 IGHV3-33P01772 117 aa9.04□□□□□ -0.96
PRPF39-204ENST00000553605 SFTA3P0C7M3 94 aa9.04□□□□□ -0.96
PRPF39-204ENST00000553605 LINC00869P0C866 280 aa9.04□□□□□ -0.96
PRPF39-204ENST00000553605 IGHV3-30-3P0DP02 117 aa9.04□□□□□ -0.96
PRPF39-204ENST00000553605 IGHV3-30-5P0DP03 117 aa9.04□□□□□ -0.96
PRPF39-204ENST00000553605 CD300CQ08708 224 aa9.04□□□□□ -0.96
PRPF39-204ENST00000553605 SURF2Q15527 256 aaPredicted RBP9.04□□□□□ -0.96
PRPF39-204ENST00000553605 TMEM229BQ8NBD8 167 aa9.04□□□□□ -0.96
PRPF39-204ENST00000553605 TMEM37Q8WXS4 190 aa9.04□□□□□ -0.96
PRPF39-204ENST00000553605 ZNF479Q96JC4 524 aa9.04□□□□□ -0.96
PRPF39-204ENST00000553605 GPR132Q9UNW8 380 aa9.04□□□□□ -0.96
PRPF39-204ENST00000553605 RNF24Q9Y225 148 aa9.04□□□□□ -0.96
PRPF39-204ENST00000553605 TRAV8-6A0A0B4J262 113 aa9.03□□□□□ -0.96
PRPF39-204ENST00000553605 H3BTX0 84 aa9.03□□□□□ -0.96
PRPF39-204ENST00000553605 SLC17A3O00476 420 aa9.03□□□□□ -0.96
PRPF39-204ENST00000553605 MPDU1O75352 247 aa9.03□□□□□ -0.96
PRPF39-204ENST00000553605 GAS8-AS1O95177 125 aa9.03□□□□□ -0.96
PRPF39-204ENST00000553605 PPT1P50897 306 aa9.03□□□□□ -0.96
PRPF39-204ENST00000553605 TIRAPP58753 221 aa9.03□□□□□ -0.96
PRPF39-204ENST00000553605 TAS2R19P59542 299 aa9.03□□□□□ -0.96
PRPF39-204ENST00000553605 RPP30P78346 268 aaKnown RBP9.03□□□□□ -0.96
PRPF39-204ENST00000553605 BTN1A1Q13410 526 aa9.03□□□□□ -0.96
PRPF39-204ENST00000553605 PATE2Q6UY27 113 aa9.03□□□□□ -0.96
PRPF39-204ENST00000553605 Q6ZRU5 148 aa9.03□□□□□ -0.96
PRPF39-204ENST00000553605 SH2D6Q7Z4S9 175 aa9.03□□□□□ -0.96
PRPF39-204ENST00000553605 ARL6Q9H0F7 186 aa9.03□□□□□ -0.96
PRPF39-204ENST00000553605 KLLNB2CW77 178 aa9.02□□□□□ -0.97
PRPF39-204ENST00000553605 RNASE4P34096 147 aaKnown RBP9.02□□□□□ -0.97
PRPF39-204ENST00000553605 LAGE3Q14657 143 aa9.02□□□□□ -0.97
PRPF39-204ENST00000553605 OR10J3Q5JRS4 329 aa9.02□□□□□ -0.97
PRPF39-204ENST00000553605 FAAP20Q6NZ36 180 aa9.02□□□□□ -0.97
PRPF39-204ENST00000553605 ARV1Q9H2C2 271 aa9.02□□□□□ -0.97
PRPF39-204ENST00000553605 PXMP4Q9Y6I8 212 aa9.02□□□□□ -0.97
PRPF39-204ENST00000553605 SMCO3A2RU48 225 aa9.01□□□□□ -0.97
PRPF39-204ENST00000553605 RGS13O14921 159 aa9.01□□□□□ -0.97
PRPF39-204ENST00000553605 HPGDSO60760 199 aa9.01□□□□□ -0.97
PRPF39-204ENST00000553605 PITX3O75364 302 aa9.01□□□□□ -0.97
PRPF39-204ENST00000553605 SELENOTP62341 195 aa9.01□□□□□ -0.97
PRPF39-204ENST00000553605 ZNF846Q147U1 533 aa9.01□□□□□ -0.97
PRPF39-204ENST00000553605 C4orf46Q504U0 113 aa9.01□□□□□ -0.97
PRPF39-204ENST00000553605 IZUMO2Q6UXV1 221 aa9.01□□□□□ -0.97
PRPF39-204ENST00000553605 C9orf47Q6ZRZ4 202 aa9.01□□□□□ -0.97
PRPF39-204ENST00000553605 BPIFA4PQ86YQ2 179 aa9.01□□□□□ -0.97
PRPF39-204ENST00000553605 NHLRC2Q8NBF2 726 aa9.01□□□□□ -0.97
PRPF39-204ENST00000553605 OR10G4Q8NGN3 311 aa9.01□□□□□ -0.97
PRPF39-204ENST00000553605 BAALCQ8WXS3 180 aa9.01□□□□□ -0.97
PRPF39-204ENST00000553605 ARPC5LQ9BPX5 153 aa9.01□□□□□ -0.97
PRPF39-204ENST00000553605 LOC100131303A0A0U1RQF7 123 aa9□□□□□ -0.97
PRPF39-204ENST00000553605 WRBO00258 174 aa9□□□□□ -0.97
PRPF39-204ENST00000553605 MED6O75586 246 aa9□□□□□ -0.97
PRPF39-204ENST00000553605 LSM3P62310 102 aaKnown RBP9□□□□□ -0.97
PRPF39-204ENST00000553605 OR10P1Q8NGE3 313 aa9□□□□□ -0.97
PRPF39-204ENST00000553605 SAT2Q96F10 170 aaPredicted RBP9□□□□□ -0.97
PRPF39-204ENST00000553605 CIB3Q96Q77 187 aaPredicted RBP9□□□□□ -0.97
PRPF39-204ENST00000553605 IGHV1OR15-1A0A075B7D0 117 aa8.99□□□□□ -0.97
PRPF39-204ENST00000553605 GPX1P07203 203 aa8.99□□□□□ -0.97
PRPF39-204ENST00000553605 ERCC8Q13216 396 aa8.99□□□□□ -0.97
PRPF39-204ENST00000553605 NEDD8Q15843 81 aa8.99□□□□□ -0.97
PRPF39-204ENST00000553605 SPANXN5Q5MJ07 72 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms