RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 KNTC1P50748 2209 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 NAV3Q8IVL0 2385 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 IGHV3-72A0A0B4J1Y9 119 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 PPIAL4CA0A0B4J2A2 164 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 TMEM189A5PLL7 270 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 OR2T8A6NH00 312 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 C9orf118A6NHY6 69 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 FAM90A27PA6NNH2 459 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 TIMM23O14925 209 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 SH2D1AO60880 128 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 IL4P05112 153 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 PPIAL4GP0DN37 164 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 CNTFRP26992 372 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 NHLH1Q02575 133 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 COTL1Q14019 142 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 EBI3Q14213 229 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 C5orf64Q2M2E5 130 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 MINOS1Q5TGZ0 78 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 ASPHD1Q5U4P2 390 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 ZNF562Q6V9R5 426 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 TTC9CQ8N5M4 171 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 Q8N6K4 173 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 FER1L6-AS1Q8NA97 138 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 IFI27L1Q96BM0 104 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 SGK494Q96LW2 274 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 PRR25Q96S07 402 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 VKORC1Q9BQB6 163 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 SLC50A1Q9BRV3 221 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 DPM3Q9P2X0 92 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 SMPXQ9UHP9 88 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 MINOS1-NBL1R4GNA1 71 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 CACNA1BQ00975 2339 aa4.11□□□□□ -1.75
TMEM55B-204ENST00000553602 VPS13AQ96RL7 3174 aa4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 D6R8Y8 96 aa4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 K7EP34 96 aa4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 GNG7O60262 68 aa4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 SMIM17P0DL12 118 aa4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 PRTN3P24158 256 aa4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 SRSF1Q07955 248 aaKnown RBP eCLIP4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 MRPL51Q4U2R6 128 aaKnown RBP4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 LYZL1Q6UWQ5 148 aa4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 GFRALQ6UXV0 394 aa4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 ADAMTSL5Q6ZMM2 481 aa4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 MAP1LC3AQ9H492 121 aa4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 HIF1ANQ9NWT6 349 aa4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 C21orf62Q9NYP8 219 aa4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 PLCE1Q9P212 2302 aa4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 CACNA1AO00555 2505 aa4.1□□□□□ -1.75
TMEM55B-204ENST00000553602 CADP27708 2225 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 IGHV4-4A0A075B6R2 117 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 TRAV8-6A0A0B4J262 113 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 GAGE12BA1L429 117 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 A1L4Q6 167 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 CBY3A6NI87 242 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 LINC01619G3V211 115 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 H3BTX0 84 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 K7EMI3 77 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 M0R3E3 92 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 ATP5LO75964 103 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 CNIH1O95406 144 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 NCR2O95944 276 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 CSN3P07498 182 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 EVI2AP22794 236 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 CD24P25063 80 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 FCER1GP30273 86 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 IFI27P40305 119 aaPredicted RBP4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 ZNF138P52744 262 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 ODF1Q14990 250 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 TAL2Q16559 108 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 ZNF672Q499Z4 452 aaPredicted RBP4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 LDLRAD2Q5SZI1 272 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 AMMECR1LQ6DCA0 310 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 Q6ZVH6 145 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 IL17RELQ6ZVW7 336 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 Q8NA96 180 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 ARPC1AQ92747 370 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 TIMD4Q96H15 378 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 RAX2Q96IS3 184 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 ASCL2Q99929 193 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 C19orf73Q9NVV2 129 aa4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 ZFHX2Q9C0A1 2572 aaPredicted RBP4.09□□□□□ -1.75
TMEM55B-204ENST00000553602 MYO15AQ9UKN7 3530 aa4.09□□□□□ -1.76
TMEM55B-204ENST00000553602 ZNF292O60281 2723 aa4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 CFAP54Q96N23 3096 aa4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 USP34Q70CQ2 3546 aa4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 IGHV3-21A0A0B4J1V1 117 aa4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 TMEM213A2RRL7 107 aa4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 GAGE10A6NGK3 116 aa4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 FABP5P3A8MUU1 101 aa4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 NDUFS7O75251 213 aa4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 NPYP01303 97 aa4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 EGR2P11161 476 aaPredicted RBP4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 COX7A1P24310 79 aa4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 CKS2P33552 79 aa4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 CACNG7P62955 275 aa4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 KLF17Q5JT82 389 aaPredicted RBP4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 Q71RC1 249 aaPredicted RBP4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 NEGR1Q7Z3B1 354 aa4.08□□□□□ -1.76
TMEM55B-204ENST00000553602 AMN1Q8IY45 258 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms