RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 SRSF2Q01130 221 aaKnown RBP11.87□□□□□ -0.51
ABCD4-218ENST00000553486 PRNTQ86SH4 94 aa11.87□□□□□ -0.51
ABCD4-218ENST00000553486 ARL6IP6Q8N6S5 226 aa11.87□□□□□ -0.51
ABCD4-218ENST00000553486 CCDC140Q96MF4 163 aa11.87□□□□□ -0.51
ABCD4-218ENST00000553486 ZNF331Q9NQX6 463 aaPredicted RBP11.87□□□□□ -0.51
ABCD4-218ENST00000553486 NAT8BQ9UHF3 227 aa11.87□□□□□ -0.51
ABCD4-218ENST00000553486 ZFP30Q9Y2G7 519 aa11.87□□□□□ -0.51
ABCD4-218ENST00000553486 SOX21Q9Y651 276 aaPredicted RBP11.87□□□□□ -0.51
ABCD4-218ENST00000553486 SERTM2A0A1B0GWG4 89 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 DIRC3C9JPN6 131 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 AVPP01185 164 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 IGLV2-11P01706 119 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 P01737 135 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 IGHG2P01859 326 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 RELQ04864 619 aaPredicted RBP11.86□□□□□ -0.51
ABCD4-218ENST00000553486 CT83Q5H943 113 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 RASL11AQ6T310 242 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 HIST1H2BLQ99880 126 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 PRSS22Q9GZN4 317 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 RPP21Q9H633 154 aaKnown RBP11.86□□□□□ -0.51
ABCD4-218ENST00000553486 ZFAND3Q9H8U3 227 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 TRAV8-1A0A0A6YYK1 113 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 C19orf71A6NCJ1 209 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 PCP4L1A6NKN8 68 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 A8MWL6 223 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 ZNF253O75346 499 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 PSG3Q16557 428 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 PACRGQ96M98 296 aaPredicted RBP11.86□□□□□ -0.51
ABCD4-218ENST00000553486 NIT2Q9NQR4 276 aa11.86□□□□□ -0.51
ABCD4-218ENST00000553486 IGHV3-35A0A0C4DH35 117 aa11.85□□□□□ -0.51
ABCD4-218ENST00000553486 H3BUA1 57 aa11.85□□□□□ -0.51
ABCD4-218ENST00000553486 BRI3O95415 125 aa11.85□□□□□ -0.51
ABCD4-218ENST00000553486 HLA-DQA1P01909 254 aa11.85□□□□□ -0.51
ABCD4-218ENST00000553486 TRGV3P03979 118 aa11.85□□□□□ -0.51
ABCD4-218ENST00000553486 SLC35B1P78383 322 aa11.85□□□□□ -0.51
ABCD4-218ENST00000553486 MRPL54Q6P161 138 aaKnown RBP11.85□□□□□ -0.51
ABCD4-218ENST00000553486 TMEM136Q6ZRR5 245 aa11.85□□□□□ -0.51
ABCD4-218ENST00000553486 LINC00527Q9UJ94 153 aa11.85□□□□□ -0.51
ABCD4-218ENST00000553486 PSG8Q9UQ74 426 aa11.85□□□□□ -0.51
ABCD4-218ENST00000553486 FRMD6-AS1P0C7T7 363 aa11.84□□□□□ -0.51
ABCD4-218ENST00000553486 RAB4BP61018 213 aa11.84□□□□□ -0.51
ABCD4-218ENST00000553486 NUP35Q8NFH5 326 aa11.84□□□□□ -0.51
ABCD4-218ENST00000553486 OR4B1Q8NGF8 309 aa11.84□□□□□ -0.51
ABCD4-218ENST00000553486 WIPF2Q8TF74 440 aaPredicted RBP11.84□□□□□ -0.51
ABCD4-218ENST00000553486 AMBPP02760 352 aa11.83□□□□□ -0.51
ABCD4-218ENST00000553486 CRISP2P16562 243 aa11.83□□□□□ -0.51
ABCD4-218ENST00000553486 S100A12P80511 92 aa11.83□□□□□ -0.51
ABCD4-218ENST00000553486 LINC00322Q6ZN03 302 aaPredicted RBP11.83□□□□□ -0.51
ABCD4-218ENST00000553486 GBGT1Q8N5D6 347 aa11.83□□□□□ -0.51
ABCD4-218ENST00000553486 TMEM18Q96B42 140 aa11.83□□□□□ -0.51
ABCD4-218ENST00000553486 NEU1Q99519 415 aa11.83□□□□□ -0.51
ABCD4-218ENST00000553486 SMAD5-AS1Q9Y6J3 95 aa11.83□□□□□ -0.51
ABCD4-218ENST00000553486 FBLL1A6NHQ2 334 aaKnown RBP11.83□□□□□ -0.52
ABCD4-218ENST00000553486 HIGD1CA8MV81 97 aa11.83□□□□□ -0.52
ABCD4-218ENST00000553486 M0R3E3 92 aa11.83□□□□□ -0.52
ABCD4-218ENST00000553486 BUB3O43684 328 aa11.83□□□□□ -0.52
ABCD4-218ENST00000553486 PYY3Q5JQD4 70 aa11.83□□□□□ -0.52
ABCD4-218ENST00000553486 C1orf194Q5T5A4 169 aa11.83□□□□□ -0.52
ABCD4-218ENST00000553486 ATP5L2Q7Z4Y8 100 aa11.83□□□□□ -0.52
ABCD4-218ENST00000553486 USMG5Q96IX5 58 aa11.83□□□□□ -0.52
ABCD4-218ENST00000553486 METTL26Q96S19 204 aa11.83□□□□□ -0.52
ABCD4-218ENST00000553486 GFRA4Q9GZZ7 299 aa11.83□□□□□ -0.52
ABCD4-218ENST00000553486 IGHV3OR16-8A0A075B7F1 116 aa11.82□□□□□ -0.52
ABCD4-218ENST00000553486 A0A087X0K7 114 aa11.82□□□□□ -0.52
ABCD4-218ENST00000553486 ZNF785A8K8V0 405 aa11.82□□□□□ -0.52
ABCD4-218ENST00000553486 NPIPB6E9PJ23 425 aa11.82□□□□□ -0.52
ABCD4-218ENST00000553486 TPPP2P59282 170 aa11.82□□□□□ -0.52
ABCD4-218ENST00000553486 FAM231BA6NCW3 169 aa11.81□□□□□ -0.52
ABCD4-218ENST00000553486 PPIFP30405 207 aaKnown RBP11.81□□□□□ -0.52
ABCD4-218ENST00000553486 CLPSL1A2RUU4 121 aa11.81□□□□□ -0.52
ABCD4-218ENST00000553486 HAX1O00165 279 aa11.81□□□□□ -0.52
ABCD4-218ENST00000553486 TCF21O43680 179 aa11.81□□□□□ -0.52
ABCD4-218ENST00000553486 BLCAPP62952 87 aa11.81□□□□□ -0.52
ABCD4-218ENST00000553486 Q0VG73 95 aa11.81□□□□□ -0.52
ABCD4-218ENST00000553486 ZC2HC1AQ96GY0 325 aa11.81□□□□□ -0.52
ABCD4-218ENST00000553486 GRIFINA4D1Z8 144 aa11.8□□□□□ -0.52
ABCD4-218ENST00000553486 APCSP02743 223 aa11.8□□□□□ -0.52
ABCD4-218ENST00000553486 ARL3P36405 182 aa11.8□□□□□ -0.52
ABCD4-218ENST00000553486 DNLZQ5SXM8 178 aa11.8□□□□□ -0.52
ABCD4-218ENST00000553486 NOL4LQ96MY1 436 aaPredicted RBP11.8□□□□□ -0.52
ABCD4-218ENST00000553486 TENM1Q9UKZ4 2725 aa11.79□□□□□ -0.52
ABCD4-218ENST00000553486 CT45A10P0DMU9 189 aa11.79□□□□□ -0.52
ABCD4-218ENST00000553486 DEFB112Q30KQ8 113 aa11.79□□□□□ -0.52
ABCD4-218ENST00000553486 C16orf54Q6UWD8 224 aa11.79□□□□□ -0.52
ABCD4-218ENST00000553486 TCF24Q7RTU0 167 aa11.79□□□□□ -0.52
ABCD4-218ENST00000553486 BAGE3Q86Y29 109 aa11.79□□□□□ -0.52
ABCD4-218ENST00000553486 TMEM256Q8N2U0 113 aa11.79□□□□□ -0.52
ABCD4-218ENST00000553486 OR2D3Q8NGH3 330 aa11.79□□□□□ -0.52
ABCD4-218ENST00000553486 SLC50A1Q9BRV3 221 aa11.79□□□□□ -0.52
ABCD4-218ENST00000553486 CHEK1O14757 476 aa11.79□□□□□ -0.52
ABCD4-218ENST00000553486 OR10J3Q5JRS4 329 aa11.79□□□□□ -0.52
ABCD4-218ENST00000553486 SAPCD1Q5SSQ6 148 aa11.79□□□□□ -0.52
ABCD4-218ENST00000553486 RBPMS2Q6ZRY4 209 aaKnown RBP11.79□□□□□ -0.52
ABCD4-218ENST00000553486 ZNF580Q9UK33 172 aa11.79□□□□□ -0.52
ABCD4-218ENST00000553486 U3KQE9 123 aa11.79□□□□□ -0.52
ABCD4-218ENST00000553486 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.78□□□□□ -0.52
ABCD4-218ENST00000553486 A0A0G2JLM5 398 aa11.78□□□□□ -0.52
ABCD4-218ENST00000553486 PF4V1P10720 104 aa11.78□□□□□ -0.52
ABCD4-218ENST00000553486 A0A1B0GUS0 222 aa11.77□□□□□ -0.52
ABCD4-218ENST00000553486 A0A1B0GXF2 115 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms