RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 DOCK1Q14185 1865 aa1.49□□□□□ -2.17
SYNE2-210ENST00000553455 LAMA3Q16787 3333 aa1.49□□□□□ -2.17
SYNE2-210ENST00000553455 CHD9Q3L8U1 2897 aa1.49□□□□□ -2.17
SYNE2-210ENST00000553455 CCDC171Q6TFL3 1326 aa1.48□□□□□ -2.17
SYNE2-210ENST00000553455 ZNF236Q9UL36 1845 aa1.48□□□□□ -2.17
SYNE2-210ENST00000553455 A0A0D9SFI3 127 aa1.48□□□□□ -2.17
SYNE2-210ENST00000553455 OR1I1O60431 355 aa1.48□□□□□ -2.17
SYNE2-210ENST00000553455 UBL3O95164 117 aa1.48□□□□□ -2.17
SYNE2-210ENST00000553455 MGST1P10620 155 aaKnown RBP1.48□□□□□ -2.17
SYNE2-210ENST00000553455 ERP29P30040 261 aaKnown RBP1.48□□□□□ -2.17
SYNE2-210ENST00000553455 HIST1H2BLQ99880 126 aa1.48□□□□□ -2.17
SYNE2-210ENST00000553455 C9orf16Q9BUW7 83 aa1.48□□□□□ -2.17
SYNE2-210ENST00000553455 ENY2Q9NPA8 101 aa1.48□□□□□ -2.17
SYNE2-210ENST00000553455 A0A0G2JMZ2 1700 aa1.48□□□□□ -2.17
SYNE2-210ENST00000553455 NCOR1O75376 2440 aa1.47□□□□□ -2.17
SYNE2-210ENST00000553455 BDP1A6H8Y1 2624 aa1.47□□□□□ -2.17
SYNE2-210ENST00000553455 MYH8P13535 1937 aa1.47□□□□□ -2.17
SYNE2-210ENST00000553455 MYH4Q9Y623 1939 aa1.47□□□□□ -2.17
SYNE2-210ENST00000553455 TRAV3A0A0B4J244 114 aa1.47□□□□□ -2.17
SYNE2-210ENST00000553455 CYB5BO43169 146 aa1.47□□□□□ -2.17
SYNE2-210ENST00000553455 LYZL6O75951 148 aa1.47□□□□□ -2.17
SYNE2-210ENST00000553455 BRS3P32247 399 aa1.47□□□□□ -2.17
SYNE2-210ENST00000553455 RNASE4P34096 147 aaKnown RBP1.47□□□□□ -2.17
SYNE2-210ENST00000553455 TSNQ15631 228 aaKnown RBP1.47□□□□□ -2.17
SYNE2-210ENST00000553455 COL6A3P12111 3177 aa1.47□□□□□ -2.17
SYNE2-210ENST00000553455 MUC3AQ02505 3323 aa1.46□□□□□ -2.17
SYNE2-210ENST00000553455 DMDP11532 3685 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 PLXNA1Q9UIW2 1896 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 CHD7Q9P2D1 2997 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 FLG2Q5D862 2391 aaPredicted RBP1.46□□□□□ -2.18
SYNE2-210ENST00000553455 LAMA4Q16363 1823 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 C7orf71A4D174 169 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 J3QRK9 145 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 ATP5G3P48201 142 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 PIGPP57054 158 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 CTAG1AP78358 180 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 OR4C6Q8NH72 309 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 OR10J5Q8NHC4 309 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 STAG3L4Q8TBR4 150 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 FAM172AQ8WUF8 416 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 ARMC1Q9NVT9 282 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 NHP2Q9NX24 153 aaKnown RBP1.46□□□□□ -2.18
SYNE2-210ENST00000553455 OPTCQ9UBM4 332 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 HS3ST2Q9Y278 367 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 UTP11Q9Y3A2 253 aaKnown RBP1.46□□□□□ -2.18
SYNE2-210ENST00000553455 EXPH5Q8NEV8 1989 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 MYH7BA7E2Y1 1941 aa1.46□□□□□ -2.18
SYNE2-210ENST00000553455 CDH23Q9H251 3354 aa1.45□□□□□ -2.18
SYNE2-210ENST00000553455 REV3LO60673 3130 aa1.45□□□□□ -2.18
SYNE2-210ENST00000553455 XIRP2A4UGR9 3374 aa1.45□□□□□ -2.18
SYNE2-210ENST00000553455 TRBV19A0A075B6N1 114 aa1.45□□□□□ -2.18
SYNE2-210ENST00000553455 RHOGP84095 191 aa1.45□□□□□ -2.18
SYNE2-210ENST00000553455 TAF1AQ15573 450 aaPredicted RBP1.45□□□□□ -2.18
SYNE2-210ENST00000553455 BRMS1LQ5PSV4 323 aa1.45□□□□□ -2.18
SYNE2-210ENST00000553455 GOLT1AQ6ZVE7 132 aa1.45□□□□□ -2.18
SYNE2-210ENST00000553455 C3orf56Q8N813 242 aa1.45□□□□□ -2.18
SYNE2-210ENST00000553455 PPTC7Q8NI37 304 aa1.45□□□□□ -2.18
SYNE2-210ENST00000553455 PSTPIP2Q9H939 334 aa1.45□□□□□ -2.18
SYNE2-210ENST00000553455 SLC35A3Q9Y2D2 325 aa1.45□□□□□ -2.18
SYNE2-210ENST00000553455 TRIOO75962 3097 aa1.45□□□□□ -2.18
SYNE2-210ENST00000553455 VCANP13611 3396 aa1.45□□□□□ -2.18
SYNE2-210ENST00000553455 MCM3APO60318 1980 aa1.45□□□□□ -2.18
SYNE2-210ENST00000553455 POLEQ07864 2286 aa1.45□□□□□ -2.18
SYNE2-210ENST00000553455 UNC80Q8N2C7 3258 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 MYH6P13533 1939 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 ALPK3Q96L96 1907 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 PRUNE2Q8WUY3 3088 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 LRRC37A2A6NM11 1700 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 TRAV12-1A0A0B4J245 112 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 SULT1B1O43704 296 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 C1QBP02746 253 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 IL9P15248 144 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 RAB4BP61018 213 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 HSPE1P61604 102 aaKnown RBP1.44□□□□□ -2.18
SYNE2-210ENST00000553455 RHOBP62745 196 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 TMED2Q15363 201 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 DEFB113Q30KQ7 82 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 LYRM7Q5U5X0 104 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 TET1Q8NFU7 2136 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 SNURFQ9Y675 71 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 WDR87Q6ZQQ6 2873 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 TECTAO75443 2155 aa1.44□□□□□ -2.18
SYNE2-210ENST00000553455 MYH9P35579 1960 aaKnown RBP1.43□□□□□ -2.18
SYNE2-210ENST00000553455 EML6Q6ZMW3 1958 aa1.43□□□□□ -2.18
SYNE2-210ENST00000553455 TTC28Q96AY4 2481 aa1.43□□□□□ -2.18
SYNE2-210ENST00000553455 KMT2BQ9UMN6 2715 aaPredicted RBP1.43□□□□□ -2.18
SYNE2-210ENST00000553455 COL4A6Q14031 1691 aa1.43□□□□□ -2.18
SYNE2-210ENST00000553455 C5orf67F2Z3F1 127 aa1.43□□□□□ -2.18
SYNE2-210ENST00000553455 CNBPP62633 177 aaKnown RBP1.43□□□□□ -2.18
SYNE2-210ENST00000553455 EIF5AP63241 154 aaKnown RBP1.43□□□□□ -2.18
SYNE2-210ENST00000553455 ESRGQ1W209 222 aa1.43□□□□□ -2.18
SYNE2-210ENST00000553455 RRN3P1Q2M238 152 aa1.43□□□□□ -2.18
SYNE2-210ENST00000553455 SFT2D1Q8WV19 159 aa1.43□□□□□ -2.18
SYNE2-210ENST00000553455 SLAMF6Q96DU3 332 aa1.43□□□□□ -2.18
SYNE2-210ENST00000553455 PHB2Q99623 299 aa1.43□□□□□ -2.18
SYNE2-210ENST00000553455 ARL5AQ9Y689 179 aa1.43□□□□□ -2.18
SYNE2-210ENST00000553455 EYSQ5T1H1 3165 aa1.43□□□□□ -2.18
SYNE2-210ENST00000553455 CACNA1BQ00975 2339 aa1.42□□□□□ -2.18
SYNE2-210ENST00000553455 ZNF93P35789 620 aaPredicted RBP1.42□□□□□ -2.18
SYNE2-210ENST00000553455 ARF6P62330 175 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms