RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 FAM30AQ9NZY2 134 aa5.75□□□□□ -1.49
CDK4-213ENST00000552713 C9orf170A2RU37 121 aa5.74□□□□□ -1.49
CDK4-213ENST00000552713 PAX4O43316 350 aa5.74□□□□□ -1.49
CDK4-213ENST00000552713 NDUFB6O95139 128 aa5.74□□□□□ -1.49
CDK4-213ENST00000552713 ORM2P19652 201 aa5.74□□□□□ -1.49
CDK4-213ENST00000552713 CXCL3P19876 107 aa5.74□□□□□ -1.49
CDK4-213ENST00000552713 UBE2MP61081 183 aaKnown RBP5.74□□□□□ -1.49
CDK4-213ENST00000552713 SUMO1P63165 101 aaKnown RBP5.74□□□□□ -1.49
CDK4-213ENST00000552713 SPANXN5Q5MJ07 72 aa5.74□□□□□ -1.49
CDK4-213ENST00000552713 Q6ZTI0 123 aa5.74□□□□□ -1.49
CDK4-213ENST00000552713 LRTM2Q8N967 370 aa5.74□□□□□ -1.49
CDK4-213ENST00000552713 OR1B1Q8NGR6 318 aa5.74□□□□□ -1.49
CDK4-213ENST00000552713 CACFD1Q9UGQ2 172 aa5.74□□□□□ -1.49
CDK4-213ENST00000552713 DUXBA0A1W2PPF3 345 aa5.73□□□□□ -1.49
CDK4-213ENST00000552713 NAP1L6A6NFF2 107 aa5.73□□□□□ -1.49
CDK4-213ENST00000552713 H7BYZ3 331 aa5.73□□□□□ -1.49
CDK4-213ENST00000552713 SYNGR2O43760 224 aa5.73□□□□□ -1.49
CDK4-213ENST00000552713 RLN2P04090 185 aa5.73□□□□□ -1.49
CDK4-213ENST00000552713 FABP1P07148 127 aa5.73□□□□□ -1.49
CDK4-213ENST00000552713 OR4E1P0C645 316 aa5.73□□□□□ -1.49
CDK4-213ENST00000552713 IL7P13232 177 aa5.73□□□□□ -1.49
CDK4-213ENST00000552713 BTCP35070 178 aa5.73□□□□□ -1.49
CDK4-213ENST00000552713 CDKN1BP46527 198 aa5.73□□□□□ -1.49
CDK4-213ENST00000552713 POLR2GP62487 172 aaKnown RBP eCLIP5.73□□□□□ -1.49
CDK4-213ENST00000552713 RAB11AP62491 216 aa5.73□□□□□ -1.49
CDK4-213ENST00000552713 PSG3Q16557 428 aa5.73□□□□□ -1.49
CDK4-213ENST00000552713 C4orf46Q504U0 113 aa5.73□□□□□ -1.49
CDK4-213ENST00000552713 OR4D5Q8NGN0 318 aa5.73□□□□□ -1.49
CDK4-213ENST00000552713 PPP1R14DQ9NXH3 145 aa5.73□□□□□ -1.49
CDK4-213ENST00000552713 SMCO3A2RU48 225 aa5.72□□□□□ -1.49
CDK4-213ENST00000552713 CENPXA8MT69 81 aa5.72□□□□□ -1.49
CDK4-213ENST00000552713 PRSS46E5RG02 174 aa5.72□□□□□ -1.49
CDK4-213ENST00000552713 H3BRN7 92 aa5.72□□□□□ -1.49
CDK4-213ENST00000552713 PLA2G10O15496 165 aa5.72□□□□□ -1.49
CDK4-213ENST00000552713 MED6O75586 246 aa5.72□□□□□ -1.49
CDK4-213ENST00000552713 SCGB1D2O95969 90 aa5.72□□□□□ -1.49
CDK4-213ENST00000552713 SLC25A6P12236 298 aa5.72□□□□□ -1.49
CDK4-213ENST00000552713 GFI1BQ5VTD9 330 aa5.72□□□□□ -1.49
CDK4-213ENST00000552713 DEDD2Q8WXF8 326 aa5.72□□□□□ -1.49
CDK4-213ENST00000552713 RPUSD4Q96CM3 377 aaKnown RBP5.72□□□□□ -1.49
CDK4-213ENST00000552713 PSENENQ9NZ42 101 aa5.72□□□□□ -1.49
CDK4-213ENST00000552713 GSKIPQ9P0R6 139 aa5.72□□□□□ -1.49
CDK4-213ENST00000552713 SLC45A2Q9UMX9 530 aa5.72□□□□□ -1.49
CDK4-213ENST00000552713 TRAV6A0A075B6T7 132 aa5.71□□□□□ -1.5
CDK4-213ENST00000552713 PIGBOS1A0A0B4J2F0 54 aa5.71□□□□□ -1.5
CDK4-213ENST00000552713 PRAC2D3DTV9 90 aa5.71□□□□□ -1.5
CDK4-213ENST00000552713 J3KRW8 73 aa5.71□□□□□ -1.5
CDK4-213ENST00000552713 CCSO14618 274 aa5.71□□□□□ -1.5
CDK4-213ENST00000552713 SSSCA1O60232 199 aa5.71□□□□□ -1.5
CDK4-213ENST00000552713 CCNKO75909 580 aa5.71□□□□□ -1.5
CDK4-213ENST00000552713 SNRPCP09234 159 aaKnown RBP5.71□□□□□ -1.5
CDK4-213ENST00000552713 RRAS2P62070 204 aaPredicted RBP5.71□□□□□ -1.5
CDK4-213ENST00000552713 RPP30P78346 268 aaKnown RBP5.71□□□□□ -1.5
CDK4-213ENST00000552713 SERTAD4-AS1Q5TG53 156 aa5.71□□□□□ -1.5
CDK4-213ENST00000552713 NFE4Q86UQ8 179 aa5.71□□□□□ -1.5
CDK4-213ENST00000552713 GPR82Q96P67 336 aa5.71□□□□□ -1.5
CDK4-213ENST00000552713 CIB3Q96Q77 187 aaPredicted RBP5.71□□□□□ -1.5
CDK4-213ENST00000552713 SHANK2-AS3Q9BTD1 123 aa5.71□□□□□ -1.5
CDK4-213ENST00000552713 TMEM70Q9BUB7 260 aa5.71□□□□□ -1.5
CDK4-213ENST00000552713 TMEM147Q9BVK8 224 aa5.71□□□□□ -1.5
CDK4-213ENST00000552713 NDUFA13Q9P0J0 144 aa5.71□□□□□ -1.5
CDK4-213ENST00000552713 STRAPQ9Y3F4 350 aaKnown RBP5.71□□□□□ -1.5
CDK4-213ENST00000552713 HMCN2Q8NDA2 5059 aa5.71□□□□□ -1.5
CDK4-213ENST00000552713 LRP1Q07954 4544 aaKnown RBP5.7□□□□□ -1.5
CDK4-213ENST00000552713 IGLV5-52A0A0A0MRZ9 124 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 LRCOL1A6NCL2 159 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 FAM25EA8MYX2 175 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 SNURFLB1AK76 121 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 MRPS12O15235 138 aaKnown RBP5.7□□□□□ -1.5
CDK4-213ENST00000552713 LYRM1O43325 122 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 CFDP00746 253 aaPredicted RBP5.7□□□□□ -1.5
CDK4-213ENST00000552713 ATP5IP56385 69 aaPredicted RBP5.7□□□□□ -1.5
CDK4-213ENST00000552713 AKR1C1Q04828 323 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 DAZ2Q13117 558 aaKnown RBP5.7□□□□□ -1.5
CDK4-213ENST00000552713 IAH1Q2TAA2 248 aaPredicted RBP5.7□□□□□ -1.5
CDK4-213ENST00000552713 LYPD5Q6UWN5 251 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 ACOT7LQ6ZUV0 252 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 WFDC10BQ8IUB3 73 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 CCDC28AQ8IWP9 274 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 ZBTB8BQ8NAP8 495 aaPredicted RBP5.7□□□□□ -1.5
CDK4-213ENST00000552713 C11orf72Q8NBR9 251 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 BPIFCQ8NFQ6 507 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 SEC22CQ9BRL7 303 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 C20orf85Q9H1P6 137 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 GSN-AS1Q9NRJ2 163 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 MSRB1Q9NZV6 116 aa5.7□□□□□ -1.5
CDK4-213ENST00000552713 TRGV2A0A075B6R0 118 aa5.69□□□□□ -1.5
CDK4-213ENST00000552713 A0A087X0K7 114 aa5.69□□□□□ -1.5
CDK4-213ENST00000552713 TRAV12-3A0A0B4J271 114 aa5.69□□□□□ -1.5
CDK4-213ENST00000552713 ZNF324O75467 553 aaPredicted RBP5.69□□□□□ -1.5
CDK4-213ENST00000552713 IGHV3-53P01767 116 aa5.69□□□□□ -1.5
CDK4-213ENST00000552713 TCRBP04435 133 aa5.69□□□□□ -1.5
CDK4-213ENST00000552713 METTL15P1P0C7V9 234 aa5.69□□□□□ -1.5
CDK4-213ENST00000552713 RPL7P18124 248 aaKnown RBP5.69□□□□□ -1.5
CDK4-213ENST00000552713 C21orf62-AS1Q17RA5 79 aa5.69□□□□□ -1.5
CDK4-213ENST00000552713 PATE2Q6UY27 113 aa5.69□□□□□ -1.5
CDK4-213ENST00000552713 CHAC2Q8WUX2 184 aa5.69□□□□□ -1.5
CDK4-213ENST00000552713 C20orf144Q9BQM9 153 aa5.69□□□□□ -1.5
CDK4-213ENST00000552713 LINC00467Q9BRT7 94 aa5.69□□□□□ -1.5
CDK4-213ENST00000552713 PLA2G2DQ9UNK4 145 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms