RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 ADCYAP1P18509 176 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 NPPCP23582 126 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 SNCAP37840 140 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 RAB5CP51148 216 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 SUB1P53999 127 aaKnown RBP eCLIP3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 DEFB131AP59861 70 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 GAMTQ14353 236 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 LGALS9BQ3B8N2 356 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 FFAR4Q5NUL3 377 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 MIC13Q5XKP0 118 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 FAM122CQ6P4D5 195 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 C16orf54Q6UWD8 224 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 EIF4E3Q8N5X7 224 aaKnown RBP3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 BPIFCQ8NFQ6 507 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 C20orf24Q9BUV8 137 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 GGACTQ9BVM4 153 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 C1QTNF4Q9BXJ3 329 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 MAP1LC3BQ9GZQ8 125 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 SLC25A22Q9H936 323 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 RPRMQ9NS64 109 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 PXMP4Q9Y6I8 212 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 HSPG2P98160 4391 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 IGHV4-28A0A0C4DH34 117 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 TEX48A0A1B0GUV7 120 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 RAB19A4D1S5 217 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 SMIM9A6NGZ8 99 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 EPM2AB3EWF7 344 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 C17orf112F2Z3M2 114 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 SOCS3O14543 225 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 HMGB3O15347 200 aaKnown RBP3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 MPDU1O75352 247 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 SCGB2A1O75556 95 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 CA1P00915 261 aaPredicted RBP3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 LINC00869P0C866 280 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 INAFM2P0DMQ5 153 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 HLA-DRB4P13762 266 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 RPL35AP18077 110 aaKnown RBP3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 GATA2P23769 480 aaPredicted RBP3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 OR10J1P30954 320 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 OPRK1P41145 380 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 RND2P52198 227 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 FGF8P55075 233 aaPredicted RBP3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 NANOS2P60321 138 aaKnown RBP3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 B2MP61769 119 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 SERF2P84101 59 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 SERTAD4-AS1Q5TG53 156 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 SPATA31B1PQ5VZV4 182 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 LCN15Q6UWW0 184 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 DPPA3Q6W0C5 159 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 Q6ZR54 194 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 TMEM144Q7Z5S9 345 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 STHQ8IWL8 128 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 FAM24BQ8N5W8 94 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 THAP8Q8NA92 274 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 OR10G4Q8NGN3 311 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 OR10G9Q8NGN4 311 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 OR10G7Q8NGN6 311 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 MBD3L1Q8WWY6 194 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 ACY3Q96HD9 319 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 SLC35E1Q96K37 410 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 FAM210AQ96ND0 272 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 METTL26Q96S19 204 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 KRTAP9-3Q9BYQ3 159 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 SLC45A2Q9UMX9 530 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 SELENOKQ9Y6D0 94 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 HLA-DRB4X5D2U9 266 aa3.18□□□□□ -1.9
TMEM106C-220ENST00000552561 IGHV4-4A0A075B6R2 117 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 TRAV1-1A0A0B4J248 108 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 CTXND1A0A1B0GTU2 59 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 LOC102723971A0A1B0GUV8 181 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 TMEM218A2RU14 115 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 TMEM189A5PLL7 270 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 C16orf90A8MZG2 172 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 H3BMM0 161 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 ZNF207O43670 478 aaKnown RBP3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 SCO1O75880 301 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 TOMM40O96008 361 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 SFTA3P0C7M3 94 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 P0DMU3 169 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 FAM231AP0DMU4 169 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 FAM231CP0DMU5 169 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 M6PRP20645 277 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 HLA-DMBP28068 263 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 GPX4P36969 197 aaPredicted RBP3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 RPL29P47914 159 aaKnown RBP3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 CDC34P49427 236 aaPredicted RBP3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 FAM3BP58499 235 aaPredicted RBP3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 NUTF2P61970 127 aaKnown RBP3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 ZNF90Q03938 601 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 ICAM4Q14773 271 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 USF2Q15853 346 aaPredicted RBP3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 GUK1Q16774 197 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 C12orf74Q32Q52 190 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 ACOT6Q3I5F7 207 aaPredicted RBP3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 RNF212Q495C1 297 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 ZNF506Q5JVG8 444 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 C1orf194Q5T5A4 169 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 SAMD13Q5VXD3 122 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 MORN5Q5VZ52 161 aa3.17□□□□□ -1.9
TMEM106C-220ENST00000552561 ETFRF1Q6IPR1 90 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms