RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 ZFYVE9O95405 1425 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 EIF3AQ14152 1382 aaKnown RBP0.5□□□□□ -2.33
USP44-207ENST00000552237 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.5□□□□□ -2.33
USP44-207ENST00000552237 PNMA8CA0A1B0GUJ8 204 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 LOC107986453A0A1B0GWG9 222 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 TSTD3H0UI37 97 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 KPNA4O00629 521 aaPredicted RBP0.5□□□□□ -2.33
USP44-207ENST00000552237 CCL25O15444 150 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 PPYP01298 95 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 TRACP01848 142 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 APOC1P02654 83 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 FABP4P15090 132 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 S100GP29377 79 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 SDC4P31431 198 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 SDC2P34741 201 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 ETV6P41212 452 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 DNAJB13P59910 316 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 GNG3P63215 75 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 DIAPH2-AS1Q14236 149 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 C1orf140Q5VVS0 124 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 CASC2Q6XLA1 102 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 Q6ZS92 163 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 OR5H6Q8NGV6 325 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 CDC26Q8NHZ8 85 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 STAG3L4Q8TBR4 150 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 POP5Q969H6 163 aaKnown RBP0.5□□□□□ -2.33
USP44-207ENST00000552237 MAGOHBQ96A72 148 aaKnown RBP0.5□□□□□ -2.33
USP44-207ENST00000552237 OBSCN-AS1Q96MR7 158 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 LINC00052Q96N35 136 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 PRRT1Q99946 306 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 TMEM126AQ9H061 195 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 WFDC10AQ9H1F0 79 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 BOLA2Q9H3K6 86 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 MUC4Q99102 2169 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 MYH1P12882 1939 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 MGAMO43451 1857 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 ANKRD31Q8N7Z5 1873 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 BCORL1Q5H9F3 1711 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 ZCCHC11Q5TAX3 1644 aaKnown RBP0.49□□□□□ -2.33
USP44-207ENST00000552237 HECW1Q76N89 1606 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 ZDBF2Q9HCK1 2354 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 HECW2Q9P2P5 1572 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 CEP164Q9UPV0 1460 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 KIAA1107Q9UPP5 1409 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 C3orf85A0A1B0GTC6 90 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 MAP1LC3B2A6NCE7 125 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 IFNA21P01568 189 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 SAA1P0DJI8 122 aaPredicted RBP0.49□□□□□ -2.33
USP44-207ENST00000552237 BCL2P10415 239 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 S100A5P33763 92 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 ARPP19P56211 112 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 PSPHP78330 225 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 DEFB113Q30KQ7 82 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 FKBP1CQ5VVH2 108 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 SAMD13Q5VXD3 122 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 GLIPR1L1Q6UWM5 242 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 Q6ZQY7 126 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 TMEM35BQ8NCS4 154 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 OR52R1Q8NGF1 315 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 OR8J3Q8NGG0 315 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 OR9Q1Q8NGQ5 310 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 PLEKHB2Q96CS7 222 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 ADAT3Q96EY9 351 aaPredicted RBP0.49□□□□□ -2.33
USP44-207ENST00000552237 PRELID3AQ96N28 172 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 SMIM7Q9BQ49 75 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 PCBD2Q9H0N5 130 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 CALML5Q9NZT1 146 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 HSPB11Q9Y547 144 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 CNTRLQ7Z7A1 2325 aa0.49□□□□□ -2.33
USP44-207ENST00000552237 LAMA4Q16363 1823 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 MYO7AQ13402 2215 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 A0A087WSZ3 146 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 TRBV30A0A0K0K1B3 111 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 IFITM5A6NNB3 132 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 M0R378 163 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 YPEL1O60688 119 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 C1QBP02746 253 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 CXCL1P09341 107 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 RNASE4P34096 147 aaKnown RBP0.48□□□□□ -2.33
USP44-207ENST00000552237 SNRPD3P62318 126 aaKnown RBP0.48□□□□□ -2.33
USP44-207ENST00000552237 CNBPP62633 177 aaKnown RBP0.48□□□□□ -2.33
USP44-207ENST00000552237 TFAMQ00059 246 aaKnown RBP0.48□□□□□ -2.33
USP44-207ENST00000552237 EIF3IQ13347 325 aaKnown RBP0.48□□□□□ -2.33
USP44-207ENST00000552237 MSMO1Q15800 293 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 NEDD8Q15843 81 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 CCSMST1Q4G0I0 132 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 UNQ5815/PRO19632Q6UWF5 114 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 ZNF833PQ6ZTB9 187 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 CTAGE3PQ8IX95 158 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 LZICQ8WZA0 190 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 CIB3Q96Q77 187 aaPredicted RBP0.48□□□□□ -2.33
USP44-207ENST00000552237 GPX7Q96SL4 187 aaPredicted RBP0.48□□□□□ -2.33
USP44-207ENST00000552237 AIF1LQ9BQI0 150 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 GGACTQ9BVM4 153 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 SS18L2Q9UHA2 77 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 NAT8BQ9UHF3 227 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 JPT1Q9UK76 154 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 UFC1Q9Y3C8 167 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 ADGRB2O60241 1585 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms