RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 SLAQ13239 276 aa9.43□□□□□ -0.9
VPS29-209ENST00000551655 BTN1A1Q13410 526 aa9.43□□□□□ -0.9
VPS29-209ENST00000551655 GPR107Q5VW38 600 aa9.43□□□□□ -0.9
VPS29-209ENST00000551655 Q6ZQT7 251 aa9.43□□□□□ -0.9
VPS29-209ENST00000551655 TERB2Q8NHR7 220 aa9.43□□□□□ -0.9
VPS29-209ENST00000551655 PCNPQ8WW12 178 aaKnown RBP9.43□□□□□ -0.9
VPS29-209ENST00000551655 ZNF479Q96JC4 524 aa9.43□□□□□ -0.9
VPS29-209ENST00000551655 PRSS46E5RG02 174 aa9.42□□□□□ -0.9
VPS29-209ENST00000551655 OR5G3P0C626 314 aa9.42□□□□□ -0.9
VPS29-209ENST00000551655 RPS19P39019 145 aaKnown RBP9.42□□□□□ -0.9
VPS29-209ENST00000551655 RAP2BP61225 183 aa9.42□□□□□ -0.9
VPS29-209ENST00000551655 SMCO1Q147U7 214 aa9.42□□□□□ -0.9
VPS29-209ENST00000551655 FAAP20Q6NZ36 180 aa9.42□□□□□ -0.9
VPS29-209ENST00000551655 Q8N3U1 123 aa9.42□□□□□ -0.9
VPS29-209ENST00000551655 EIF4E3Q8N5X7 224 aaKnown RBP9.42□□□□□ -0.9
VPS29-209ENST00000551655 BAALCQ8WXS3 180 aa9.42□□□□□ -0.9
VPS29-209ENST00000551655 LPAP08519 4548 aa9.42□□□□□ -0.9
VPS29-209ENST00000551655 FAT4Q6V0I7 4981 aa9.41□□□□□ -0.9
VPS29-209ENST00000551655 C7orf71A4D174 169 aa9.41□□□□□ -0.9
VPS29-209ENST00000551655 RBFOX3A6NFN3 312 aa9.41□□□□□ -0.9
VPS29-209ENST00000551655 CRYM-AS1A6NIL9 109 aa9.41□□□□□ -0.9
VPS29-209ENST00000551655 IGLV2-11P01706 119 aa9.41□□□□□ -0.9
VPS29-209ENST00000551655 AKR1C1Q04828 323 aa9.41□□□□□ -0.9
VPS29-209ENST00000551655 ANXA2RQ3ZCQ2 193 aa9.41□□□□□ -0.9
VPS29-209ENST00000551655 C9orf47Q6ZRZ4 202 aa9.41□□□□□ -0.9
VPS29-209ENST00000551655 HYPMO75409 117 aa9.4□□□□□ -0.9
VPS29-209ENST00000551655 ANXA7P20073 488 aaKnown RBP9.4□□□□□ -0.9
VPS29-209ENST00000551655 CCR6P51684 374 aa9.4□□□□□ -0.9
VPS29-209ENST00000551655 GABARAPL2P60520 117 aa9.4□□□□□ -0.9
VPS29-209ENST00000551655 RAB11AP62491 216 aa9.4□□□□□ -0.9
VPS29-209ENST00000551655 ACOT6Q3I5F7 207 aaPredicted RBP9.4□□□□□ -0.9
VPS29-209ENST00000551655 PATE2Q6UY27 113 aa9.4□□□□□ -0.9
VPS29-209ENST00000551655 LYZL2Q7Z4W2 148 aa9.4□□□□□ -0.9
VPS29-209ENST00000551655 OR52I2Q8NH67 350 aa9.4□□□□□ -0.9
VPS29-209ENST00000551655 COMMD3Q9UBI1 195 aa9.4□□□□□ -0.9
VPS29-209ENST00000551655 C14orf166Q9Y224 244 aaKnown RBP9.4□□□□□ -0.9
VPS29-209ENST00000551655 TMEM127O75204 238 aa9.39□□□□□ -0.91
VPS29-209ENST00000551655 IL5P05113 134 aa9.39□□□□□ -0.91
VPS29-209ENST00000551655 LINC00869P0C866 280 aa9.39□□□□□ -0.91
VPS29-209ENST00000551655 S100A7P31151 101 aa9.39□□□□□ -0.91
VPS29-209ENST00000551655 TNFSF8P32971 234 aa9.39□□□□□ -0.91
VPS29-209ENST00000551655 PPT1P50897 306 aa9.39□□□□□ -0.91
VPS29-209ENST00000551655 ATP5IP56385 69 aaPredicted RBP9.39□□□□□ -0.91
VPS29-209ENST00000551655 ERCC8Q13216 396 aa9.39□□□□□ -0.91
VPS29-209ENST00000551655 LCN15Q6UWW0 184 aa9.39□□□□□ -0.91
VPS29-209ENST00000551655 CYP2G1PQ6ZSU1 146 aa9.39□□□□□ -0.91
VPS29-209ENST00000551655 ACOT7LQ6ZUV0 252 aa9.39□□□□□ -0.91
VPS29-209ENST00000551655 TXNDC17Q9BRA2 123 aa9.39□□□□□ -0.91
VPS29-209ENST00000551655 SMIM31A0A1B0GVY4 71 aa9.38□□□□□ -0.91
VPS29-209ENST00000551655 SLC25A5P05141 298 aaKnown RBP9.38□□□□□ -0.91
VPS29-209ENST00000551655 RNASE4P34096 147 aaKnown RBP9.38□□□□□ -0.91
VPS29-209ENST00000551655 ASAH1Q13510 395 aa9.38□□□□□ -0.91
VPS29-209ENST00000551655 MORN5Q5VZ52 161 aa9.38□□□□□ -0.91
VPS29-209ENST00000551655 ODF3Q96PU9 254 aa9.38□□□□□ -0.91
VPS29-209ENST00000551655 SLC50A1Q9BRV3 221 aa9.38□□□□□ -0.91
VPS29-209ENST00000551655 TM2D2Q9BX73 214 aa9.38□□□□□ -0.91
VPS29-209ENST00000551655 SLC25A31Q9H0C2 315 aa9.38□□□□□ -0.91
VPS29-209ENST00000551655 CACFD1Q9UGQ2 172 aa9.38□□□□□ -0.91
VPS29-209ENST00000551655 RAB3DO95716 219 aa9.37□□□□□ -0.91
VPS29-209ENST00000551655 ORM1P02763 201 aa9.37□□□□□ -0.91
VPS29-209ENST00000551655 CXCL2P19875 107 aa9.37□□□□□ -0.91
VPS29-209ENST00000551655 LSM3P62310 102 aaKnown RBP9.37□□□□□ -0.91
VPS29-209ENST00000551655 ZNF846Q147U1 533 aa9.37□□□□□ -0.91
VPS29-209ENST00000551655 OR10J3Q5JRS4 329 aa9.37□□□□□ -0.91
VPS29-209ENST00000551655 IBA57Q5T440 356 aaKnown RBP9.37□□□□□ -0.91
VPS29-209ENST00000551655 PRR9Q5T870 116 aa9.37□□□□□ -0.91
VPS29-209ENST00000551655 CROCCP3Q8IVE0 287 aa9.37□□□□□ -0.91
VPS29-209ENST00000551655 NHLRC2Q8NBF2 726 aa9.37□□□□□ -0.91
VPS29-209ENST00000551655 SMCO3A2RU48 225 aa9.36□□□□□ -0.91
VPS29-209ENST00000551655 KLLNB2CW77 178 aa9.36□□□□□ -0.91
VPS29-209ENST00000551655 HPGDSO60760 199 aa9.36□□□□□ -0.91
VPS29-209ENST00000551655 APOA1P02647 267 aa9.36□□□□□ -0.91
VPS29-209ENST00000551655 Q6ZRU5 148 aa9.36□□□□□ -0.91
VPS29-209ENST00000551655 IQCF2Q8IXL9 164 aa9.36□□□□□ -0.91
VPS29-209ENST00000551655 OR10P1Q8NGE3 313 aa9.36□□□□□ -0.91
VPS29-209ENST00000551655 TMEM37Q8WXS4 190 aa9.36□□□□□ -0.91
VPS29-209ENST00000551655 ARL6Q9H0F7 186 aa9.36□□□□□ -0.91
VPS29-209ENST00000551655 C9JCJ5 164 aa9.35□□□□□ -0.91
VPS29-209ENST00000551655 H3BP45 60 aa9.35□□□□□ -0.91
VPS29-209ENST00000551655 MPDU1O75352 247 aa9.35□□□□□ -0.91
VPS29-209ENST00000551655 AKR1C4P17516 323 aa9.35□□□□□ -0.91
VPS29-209ENST00000551655 PLP1P60201 277 aa9.35□□□□□ -0.91
VPS29-209ENST00000551655 LELP1Q5T871 98 aa9.35□□□□□ -0.91
VPS29-209ENST00000551655 ARV1Q9H2C2 271 aa9.35□□□□□ -0.91
VPS29-209ENST00000551655 MTFP1Q9UDX5 166 aa9.35□□□□□ -0.91
VPS29-209ENST00000551655 MUC2Q02817 5179 aa9.34□□□□□ -0.91
VPS29-209ENST00000551655 TRAV8-6A0A0B4J262 113 aa9.34□□□□□ -0.91
VPS29-209ENST00000551655 A0A0B4J2A0 478 aa9.34□□□□□ -0.91
VPS29-209ENST00000551655 H3BQ15 152 aa9.34□□□□□ -0.91
VPS29-209ENST00000551655 WRBO00258 174 aa9.34□□□□□ -0.91
VPS29-209ENST00000551655 RGS13O14921 159 aa9.34□□□□□ -0.91
VPS29-209ENST00000551655 OR4E1P0C645 316 aa9.34□□□□□ -0.91
VPS29-209ENST00000551655 TBPP20226 339 aa9.34□□□□□ -0.91
VPS29-209ENST00000551655 TIRAPP58753 221 aa9.34□□□□□ -0.91
VPS29-209ENST00000551655 LAGE3Q14657 143 aa9.34□□□□□ -0.91
VPS29-209ENST00000551655 NEDD8Q15843 81 aa9.34□□□□□ -0.91
VPS29-209ENST00000551655 IZUMO2Q6UXV1 221 aa9.34□□□□□ -0.91
VPS29-209ENST00000551655 OR10G4Q8NGN3 311 aa9.34□□□□□ -0.91
VPS29-209ENST00000551655 ARPC5LQ9BPX5 153 aa9.34□□□□□ -0.91
VPS29-209ENST00000551655 SHPKQ9UHJ6 478 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms