RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ANKHD1Q8IWZ3 2542 aaKnown RBP11.08□□□□□ -0.64
RAPGEF3-218ENST00000548919 WNK2Q9Y3S1 2297 aa11.08□□□□□ -0.64
RAPGEF3-218ENST00000548919 WI2-2373I1.2A0A1W2PRP0 233 aa11.08□□□□□ -0.64
RAPGEF3-218ENST00000548919 CD5LO43866 347 aa11.08□□□□□ -0.64
RAPGEF3-218ENST00000548919 NHLH1Q02575 133 aa11.08□□□□□ -0.64
RAPGEF3-218ENST00000548919 HES1Q14469 280 aa11.08□□□□□ -0.64
RAPGEF3-218ENST00000548919 WFDC3Q8IUB2 231 aa11.08□□□□□ -0.64
RAPGEF3-218ENST00000548919 LYPD1Q8N2G4 141 aa11.08□□□□□ -0.64
RAPGEF3-218ENST00000548919 CST9LQ9H4G1 147 aa11.08□□□□□ -0.64
RAPGEF3-218ENST00000548919 NBR2O15453 112 aa11.07□□□□□ -0.64
RAPGEF3-218ENST00000548919 ZNF493Q6ZR52 646 aa11.07□□□□□ -0.64
RAPGEF3-218ENST00000548919 AAMDCQ9H7C9 122 aa11.07□□□□□ -0.64
RAPGEF3-218ENST00000548919 A0A1B0GW15 77 aa11.07□□□□□ -0.64
RAPGEF3-218ENST00000548919 C7orf71A4D174 169 aa11.07□□□□□ -0.64
RAPGEF3-218ENST00000548919 B9A039 149 aa11.07□□□□□ -0.64
RAPGEF3-218ENST00000548919 CD3EP07766 207 aa11.07□□□□□ -0.64
RAPGEF3-218ENST00000548919 CACNG7P62955 275 aa11.07□□□□□ -0.64
RAPGEF3-218ENST00000548919 MRPL51Q4U2R6 128 aaKnown RBP11.07□□□□□ -0.64
RAPGEF3-218ENST00000548919 FAM104BQ5XKR9 115 aa11.07□□□□□ -0.64
RAPGEF3-218ENST00000548919 FGF6P10767 208 aa11.06□□□□□ -0.64
RAPGEF3-218ENST00000548919 Q6AWC8 147 aa11.06□□□□□ -0.64
RAPGEF3-218ENST00000548919 ZFHX3Q15911 3703 aa11.06□□□□□ -0.64
RAPGEF3-218ENST00000548919 NBASA2RRP1 2371 aa11.06□□□□□ -0.64
RAPGEF3-218ENST00000548919 IGHV3-35A0A0C4DH35 117 aa11.06□□□□□ -0.64
RAPGEF3-218ENST00000548919 HLA-DMBP28068 263 aa11.06□□□□□ -0.64
RAPGEF3-218ENST00000548919 ZNF80P51504 273 aaPredicted RBP11.06□□□□□ -0.64
RAPGEF3-218ENST00000548919 TMEM97Q5BJF2 176 aa11.06□□□□□ -0.64
RAPGEF3-218ENST00000548919 ORMDL3Q8N138 153 aa11.06□□□□□ -0.64
RAPGEF3-218ENST00000548919 FANCD2OSQ96PS1 177 aa11.06□□□□□ -0.64
RAPGEF3-218ENST00000548919 NAA38Q9BRA0 125 aaKnown RBP11.06□□□□□ -0.64
RAPGEF3-218ENST00000548919 RABAC1Q9UI14 185 aa11.06□□□□□ -0.64
RAPGEF3-218ENST00000548919 MED13LQ71F56 2210 aa11.06□□□□□ -0.64
RAPGEF3-218ENST00000548919 NPIPB5A8MRT5 1133 aa11.05□□□□□ -0.64
RAPGEF3-218ENST00000548919 F8W735 103 aaPredicted RBP11.05□□□□□ -0.64
RAPGEF3-218ENST00000548919 EGR2P11161 476 aaPredicted RBP11.05□□□□□ -0.64
RAPGEF3-218ENST00000548919 GRNP28799 593 aaKnown RBP11.05□□□□□ -0.64
RAPGEF3-218ENST00000548919 CACNA1BQ00975 2339 aa11.05□□□□□ -0.64
RAPGEF3-218ENST00000548919 NPYP01303 97 aa11.05□□□□□ -0.64
RAPGEF3-218ENST00000548919 TWIST1Q15672 202 aa11.05□□□□□ -0.64
RAPGEF3-218ENST00000548919 CFHR4Q92496 578 aa11.05□□□□□ -0.64
RAPGEF3-218ENST00000548919 RNF5Q99942 180 aa11.05□□□□□ -0.64
RAPGEF3-218ENST00000548919 VGLL1Q99990 258 aa11.05□□□□□ -0.64
RAPGEF3-218ENST00000548919 NDPQ00604 133 aa11.05□□□□□ -0.64
RAPGEF3-218ENST00000548919 OCIAD2Q56VL3 154 aa11.05□□□□□ -0.64
RAPGEF3-218ENST00000548919 MSRB1Q9NZV6 116 aa11.05□□□□□ -0.64
RAPGEF3-218ENST00000548919 U3KQK5 164 aa11.05□□□□□ -0.64
RAPGEF3-218ENST00000548919 GAS8-AS1O95177 125 aa11.04□□□□□ -0.64
RAPGEF3-218ENST00000548919 ZNF672Q499Z4 452 aaPredicted RBP11.04□□□□□ -0.64
RAPGEF3-218ENST00000548919 PRSS57Q6UWY2 283 aa11.04□□□□□ -0.64
RAPGEF3-218ENST00000548919 SRSF8Q9BRL6 282 aaKnown RBP11.04□□□□□ -0.64
RAPGEF3-218ENST00000548919 THYN1Q9P016 225 aa11.04□□□□□ -0.64
RAPGEF3-218ENST00000548919 DPM3Q9P2X0 92 aa11.04□□□□□ -0.64
RAPGEF3-218ENST00000548919 SPTA1P02549 2419 aa11.04□□□□□ -0.64
RAPGEF3-218ENST00000548919 GAGE12BA1L429 117 aa11.04□□□□□ -0.64
RAPGEF3-218ENST00000548919 CKS2P33552 79 aa11.04□□□□□ -0.64
RAPGEF3-218ENST00000548919 ARL6IP6Q8N6S5 226 aa11.04□□□□□ -0.64
RAPGEF3-218ENST00000548919 PRR25Q96S07 402 aa11.04□□□□□ -0.64
RAPGEF3-218ENST00000548919 IGLV11-55A0A075B6I3 123 aa11.03□□□□□ -0.64
RAPGEF3-218ENST00000548919 NCBP2LA6PVI3 153 aaKnown RBP11.03□□□□□ -0.64
RAPGEF3-218ENST00000548919 MFAP4P55083 255 aa11.03□□□□□ -0.64
RAPGEF3-218ENST00000548919 PEF1Q9UBV8 284 aaKnown RBP11.03□□□□□ -0.64
RAPGEF3-218ENST00000548919 PDE6HQ13956 83 aa11.03□□□□□ -0.64
RAPGEF3-218ENST00000548919 C18orf15Q96N68 181 aa11.03□□□□□ -0.64
RAPGEF3-218ENST00000548919 VPS25Q9BRG1 176 aa11.03□□□□□ -0.64
RAPGEF3-218ENST00000548919 RAB1BQ9H0U4 201 aa11.03□□□□□ -0.64
RAPGEF3-218ENST00000548919 HBDP02042 147 aa11.02□□□□□ -0.64
RAPGEF3-218ENST00000548919 PAX8Q06710 450 aa11.02□□□□□ -0.64
RAPGEF3-218ENST00000548919 C5orf64Q2M2E5 130 aa11.02□□□□□ -0.64
RAPGEF3-218ENST00000548919 ZNF575Q86XF7 245 aa11.02□□□□□ -0.64
RAPGEF3-218ENST00000548919 PCP2Q8IVA1 136 aa11.02□□□□□ -0.64
RAPGEF3-218ENST00000548919 DKK2Q9UBU2 259 aa11.02□□□□□ -0.64
RAPGEF3-218ENST00000548919 PTPRZ1P23471 2315 aaPredicted RBP11.02□□□□□ -0.65
RAPGEF3-218ENST00000548919 LGALS9BQ3B8N2 356 aa11.02□□□□□ -0.65
RAPGEF3-218ENST00000548919 SAPCD1Q5SSQ6 148 aa11.02□□□□□ -0.65
RAPGEF3-218ENST00000548919 LGALS9CQ6DKI2 356 aa11.02□□□□□ -0.65
RAPGEF3-218ENST00000548919 C21orf62Q9NYP8 219 aa11.02□□□□□ -0.65
RAPGEF3-218ENST00000548919 SMAD5-AS1Q9Y6J3 95 aa11.02□□□□□ -0.65
RAPGEF3-218ENST00000548919 FAM90A27PA6NNH2 459 aa11.01□□□□□ -0.65
RAPGEF3-218ENST00000548919 NDUFA3O95167 84 aa11.01□□□□□ -0.65
RAPGEF3-218ENST00000548919 IGHG4P01861 327 aa11.01□□□□□ -0.65
RAPGEF3-218ENST00000548919 NMUP48645 174 aa11.01□□□□□ -0.65
RAPGEF3-218ENST00000548919 DYNAPQ8N1N2 210 aa11.01□□□□□ -0.65
RAPGEF3-218ENST00000548919 FER1L6-AS1Q8NA97 138 aa11.01□□□□□ -0.65
RAPGEF3-218ENST00000548919 NPBQ8NG41 125 aa11.01□□□□□ -0.65
RAPGEF3-218ENST00000548919 IFI27L1Q96BM0 104 aa11.01□□□□□ -0.65
RAPGEF3-218ENST00000548919 JMJD8Q96S16 334 aa11.01□□□□□ -0.65
RAPGEF3-218ENST00000548919 PPIFP30405 207 aaKnown RBP11.01□□□□□ -0.65
RAPGEF3-218ENST00000548919 BOD1L2Q8IYS8 172 aa11.01□□□□□ -0.65
RAPGEF3-218ENST00000548919 LY6G5BQ8NDX9 201 aa11.01□□□□□ -0.65
RAPGEF3-218ENST00000548919 ARPC1AQ92747 370 aa11.01□□□□□ -0.65
RAPGEF3-218ENST00000548919 ORM1P02763 201 aa11□□□□□ -0.65
RAPGEF3-218ENST00000548919 SEC11AP67812 179 aa11□□□□□ -0.65
RAPGEF3-218ENST00000548919 ERCC8Q13216 396 aa11□□□□□ -0.65
RAPGEF3-218ENST00000548919 RAB37Q96AX2 223 aa11□□□□□ -0.65
RAPGEF3-218ENST00000548919 SMAD7O15105 426 aaKnown RBP11□□□□□ -0.65
RAPGEF3-218ENST00000548919 NDUFS7O75251 213 aa11□□□□□ -0.65
RAPGEF3-218ENST00000548919 OR11H6Q8NGC7 330 aa11□□□□□ -0.65
RAPGEF3-218ENST00000548919 GAGE10A6NGK3 116 aa10.99□□□□□ -0.65
RAPGEF3-218ENST00000548919 H3BUT2 72 aa10.99□□□□□ -0.65
RAPGEF3-218ENST00000548919 EVI2AP22794 236 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms