RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CHEK1O14757 476 aa9.91□□□□□ -0.82
SCAF11-209ENST00000547018 CT45A10P0DMU9 189 aa9.91□□□□□ -0.82
SCAF11-209ENST00000547018 WFDC3Q8IUB2 231 aa9.91□□□□□ -0.82
SCAF11-209ENST00000547018 NACAE9PAV3 2078 aa9.91□□□□□ -0.82
SCAF11-209ENST00000547018 NIPBLQ6KC79 2804 aaeCLIP9.91□□□□□ -0.822e-6■■■■□ 24.4
SCAF11-209ENST00000547018 H3BRN7 92 aa9.91□□□□□ -0.82
SCAF11-209ENST00000547018 K7EQM0 130 aa9.91□□□□□ -0.82
SCAF11-209ENST00000547018 OVOL3O00110 214 aa9.91□□□□□ -0.82
SCAF11-209ENST00000547018 SPRY2O43597 315 aa9.91□□□□□ -0.82
SCAF11-209ENST00000547018 C1orf122Q6ZSJ8 110 aa9.91□□□□□ -0.82
SCAF11-209ENST00000547018 Q86TA4 180 aa9.91□□□□□ -0.82
SCAF11-209ENST00000547018 C10orf105Q8TEF2 133 aa9.91□□□□□ -0.82
SCAF11-209ENST00000547018 AJUBAQ96IF1 538 aa9.91□□□□□ -0.82
SCAF11-209ENST00000547018 ZNF414Q96IQ9 312 aa9.91□□□□□ -0.82
SCAF11-209ENST00000547018 VGLL1Q99990 258 aa9.91□□□□□ -0.82
SCAF11-209ENST00000547018 MCRIP2Q9BUT9 160 aaKnown RBP9.91□□□□□ -0.82
SCAF11-209ENST00000547018 RPP21Q9H633 154 aaKnown RBP9.91□□□□□ -0.82
SCAF11-209ENST00000547018 IZUMO1RA6ND01 250 aa9.9□□□□□ -0.82
SCAF11-209ENST00000547018 TTC9CQ8N5M4 171 aa9.9□□□□□ -0.82
SCAF11-209ENST00000547018 GTSF1Q8WW33 167 aa9.9□□□□□ -0.82
SCAF11-209ENST00000547018 AGRNO00468 2067 aa9.9□□□□□ -0.82
SCAF11-209ENST00000547018 ORM1P02763 201 aa9.9□□□□□ -0.82
SCAF11-209ENST00000547018 SIGLEC15Q6ZMC9 328 aa9.9□□□□□ -0.82
SCAF11-209ENST00000547018 PRDM13Q9H4Q3 707 aa9.9□□□□□ -0.82
SCAF11-209ENST00000547018 NBPF19A0A087WUL8 3843 aa9.9□□□□□ -0.82
SCAF11-209ENST00000547018 TENM4Q6N022 2769 aa9.9□□□□□ -0.83
SCAF11-209ENST00000547018 A8MWL6 223 aa9.9□□□□□ -0.83
SCAF11-209ENST00000547018 COX6B1P14854 86 aa9.9□□□□□ -0.83
SCAF11-209ENST00000547018 TFPI2P48307 235 aa9.9□□□□□ -0.83
SCAF11-209ENST00000547018 FXYD7P58549 80 aa9.9□□□□□ -0.83
SCAF11-209ENST00000547018 C10orf99Q6UWK7 81 aa9.9□□□□□ -0.83
SCAF11-209ENST00000547018 Q8N6K4 173 aa9.9□□□□□ -0.83
SCAF11-209ENST00000547018 GLMPQ8WWB7 406 aa9.9□□□□□ -0.83
SCAF11-209ENST00000547018 GRAMD2BQ96HH9 432 aa9.9□□□□□ -0.83
SCAF11-209ENST00000547018 C14orf144Q96I85 54 aa9.9□□□□□ -0.83
SCAF11-209ENST00000547018 TRAV41A0A0B4J266 112 aa9.89□□□□□ -0.83
SCAF11-209ENST00000547018 PRAC2D3DTV9 90 aa9.89□□□□□ -0.83
SCAF11-209ENST00000547018 TSTD3H0UI37 97 aa9.89□□□□□ -0.83
SCAF11-209ENST00000547018 HSBP1O75506 76 aa9.89□□□□□ -0.83
SCAF11-209ENST00000547018 MSMBP08118 114 aa9.89□□□□□ -0.83
SCAF11-209ENST00000547018 PAX1P15863 534 aa9.89□□□□□ -0.83
SCAF11-209ENST00000547018 MYCNOSP40205 109 aa9.89□□□□□ -0.83
SCAF11-209ENST00000547018 TCTAP57738 103 aa9.89□□□□□ -0.83
SCAF11-209ENST00000547018 LCN12Q6JVE5 192 aa9.89□□□□□ -0.83
SCAF11-209ENST00000547018 TBL2Q9Y4P3 447 aaKnown RBP9.89□□□□□ -0.83
SCAF11-209ENST00000547018 RNF114Q9Y508 228 aa9.89□□□□□ -0.83
SCAF11-209ENST00000547018 LOC389332A0A1B0GUA5 103 aa9.89□□□□□ -0.83
SCAF11-209ENST00000547018 TMEM238LA0A1B0GVL6 79 aa9.89□□□□□ -0.83
SCAF11-209ENST00000547018 SMIM27A0A1W2PRY6 76 aa9.89□□□□□ -0.83
SCAF11-209ENST00000547018 YPEL3P61236 119 aaPredicted RBP9.89□□□□□ -0.83
SCAF11-209ENST00000547018 BATFQ16520 125 aa9.89□□□□□ -0.83
SCAF11-209ENST00000547018 FMC1Q96HJ9 113 aa9.89□□□□□ -0.83
SCAF11-209ENST00000547018 TRAV30A0A087WSZ9 112 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 GOSR1O95249 250 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 ATP5G2Q06055 141 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 IL17RELQ6ZVW7 336 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 Q6ZWC4 215 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 ZNF664Q8N3J9 261 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 TSKUQ8WUA8 353 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 LY96Q9Y6Y9 160 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 ARMS2P0C7Q2 107 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 JOSD1Q15040 202 aaPredicted RBP9.88□□□□□ -0.83
SCAF11-209ENST00000547018 WDR73Q6P4I2 378 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 NAGKQ9UJ70 344 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 GCN1Q92616 2671 aaKnown RBP9.88□□□□□ -0.83
SCAF11-209ENST00000547018 IGHV4-59P01825 116 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 IGLC2P0DOY2 106 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 RPL7P18124 248 aaKnown RBP9.88□□□□□ -0.83
SCAF11-209ENST00000547018 LINC00310P59036 64 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 C5orf56Q8N8D9 126 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 CCDC140Q96MF4 163 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 GNB1LQ9BYB4 327 aa9.88□□□□□ -0.83
SCAF11-209ENST00000547018 OOSP1A8MZH6 123 aa9.87□□□□□ -0.83
SCAF11-209ENST00000547018 DIRC3C9JPN6 131 aa9.87□□□□□ -0.83
SCAF11-209ENST00000547018 SMAD7O15105 426 aaKnown RBP9.87□□□□□ -0.83
SCAF11-209ENST00000547018 HLA-DQA1P01909 254 aa9.87□□□□□ -0.83
SCAF11-209ENST00000547018 PLP1P60201 277 aa9.87□□□□□ -0.83
SCAF11-209ENST00000547018 Q6ZQT7 251 aa9.87□□□□□ -0.83
SCAF11-209ENST00000547018 SCGB2A1O75556 95 aa9.87□□□□□ -0.83
SCAF11-209ENST00000547018 LTAP01374 205 aa9.87□□□□□ -0.83
SCAF11-209ENST00000547018 UNQ9165/PRO28630Q6UXU0 137 aa9.87□□□□□ -0.83
SCAF11-209ENST00000547018 ZNF705AQ6ZN79 300 aaPredicted RBP9.87□□□□□ -0.83
SCAF11-209ENST00000547018 MOB4Q9Y3A3 225 aa9.87□□□□□ -0.83
SCAF11-209ENST00000547018 UBR5O95071 2799 aaPredicted RBP9.86□□□□□ -0.83
SCAF11-209ENST00000547018 PAX8Q06710 450 aa9.86□□□□□ -0.83
SCAF11-209ENST00000547018 FAM110DQ8TAY7 271 aaPredicted RBP9.86□□□□□ -0.83
SCAF11-209ENST00000547018 WI2-2373I1.2A0A1W2PRP0 233 aa9.86□□□□□ -0.83
SCAF11-209ENST00000547018 IGLV2-11P01706 119 aa9.86□□□□□ -0.83
SCAF11-209ENST00000547018 PSG3Q16557 428 aa9.86□□□□□ -0.83
SCAF11-209ENST00000547018 KHDC1LQ5JSQ8 128 aa9.86□□□□□ -0.83
SCAF11-209ENST00000547018 EEF1AKMT3Q96AZ1 226 aa9.86□□□□□ -0.83
SCAF11-209ENST00000547018 PMCHL2Q9BQD1 86 aa9.86□□□□□ -0.83
SCAF11-209ENST00000547018 TMEM213A2RRL7 107 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 ARL3P36405 182 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 CRIP1P50238 77 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 HBBP68871 147 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 ZNF502Q8TBZ5 544 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 NRN1Q9NPD7 142 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 SMAD5-AS1Q9Y6J3 95 aa9.85□□□□□ -0.83
SCAF11-209ENST00000547018 M0R2Z0 102 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms