RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 TIMM17BO60830 172 aa4□□□□□ -1.77
UBE4A-203ENST00000545354 CKS2P33552 79 aa4□□□□□ -1.77
UBE4A-203ENST00000545354 CCL23P55773 120 aa4□□□□□ -1.77
UBE4A-203ENST00000545354 ZFP2Q6ZN57 461 aa4□□□□□ -1.77
UBE4A-203ENST00000545354 RPP25LQ8N5L8 163 aaKnown RBP4□□□□□ -1.77
UBE4A-203ENST00000545354 NTN5Q8WTR8 489 aaPredicted RBP4□□□□□ -1.77
UBE4A-203ENST00000545354 RITA1Q96K30 269 aa4□□□□□ -1.77
UBE4A-203ENST00000545354 CXCL16Q9H2A7 254 aa4□□□□□ -1.77
UBE4A-203ENST00000545354 CXXC4Q9H2H0 198 aa4□□□□□ -1.77
UBE4A-203ENST00000545354 C11orf68Q9H3H3 251 aaKnown RBP4□□□□□ -1.77
UBE4A-203ENST00000545354 ZNF492Q9P255 531 aa4□□□□□ -1.77
UBE4A-203ENST00000545354 UBE2D1P51668 147 aa3.99□□□□□ -1.77
UBE4A-203ENST00000545354 ZNF134P52741 427 aa3.99□□□□□ -1.77
UBE4A-203ENST00000545354 MFAP2P55001 183 aa3.99□□□□□ -1.77
UBE4A-203ENST00000545354 MLANAQ16655 118 aa3.99□□□□□ -1.77
UBE4A-203ENST00000545354 SDIM1Q6ZPB5 146 aa3.99□□□□□ -1.77
UBE4A-203ENST00000545354 NDUFA11Q86Y39 141 aa3.99□□□□□ -1.77
UBE4A-203ENST00000545354 ZNF525Q8N782 197 aa3.99□□□□□ -1.77
UBE4A-203ENST00000545354 GVQW1Q8N7I0 195 aa3.99□□□□□ -1.77
UBE4A-203ENST00000545354 NUP37Q8NFH4 326 aa3.99□□□□□ -1.77
UBE4A-203ENST00000545354 FANCMQ8IYD8 2048 aa3.99□□□□□ -1.77
UBE4A-203ENST00000545354 WDFY4Q6ZS81 3184 aa3.99□□□□□ -1.77
UBE4A-203ENST00000545354 TRAV3A0A0B4J244 114 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 A0A0D9SEW6 157 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 A0A1B0GXF2 115 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 PEX7O00628 323 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 SPRY3O43610 288 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 CD59P13987 128 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 ZNF823P16415 610 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 NPPCP23582 126 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 PHF5AQ7RTV0 110 aaKnown RBP3.98□□□□□ -1.77
UBE4A-203ENST00000545354 LYZL2Q7Z4W2 148 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 TMEM75Q8N9X5 138 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 TOMM6Q96B49 74 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 GFRA4Q9GZZ7 299 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 MUC6Q6W4X9 2439 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 TRBV7-3A0A075B6L6 115 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 F6UB75 175 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 H3BP45 60 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 COX6CP09669 75 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 GYPEP15421 78 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 IFI27P40305 119 aaPredicted RBP3.98□□□□□ -1.77
UBE4A-203ENST00000545354 ARTNQ5T4W7 220 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 CPAMD8Q8IZJ3 1885 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 SPTSSAQ969W0 71 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 TP73-AS1Q9UF72 201 aa3.98□□□□□ -1.77
UBE4A-203ENST00000545354 MED12LQ86YW9 2145 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 SCN5AQ14524 2016 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 REV3LO60673 3130 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 LINC01549A6NIU2 74 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 CPSF4LA6NMK7 179 aaKnown RBP3.97□□□□□ -1.77
UBE4A-203ENST00000545354 OVOL3O00110 214 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 MYCNOSP40205 109 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 UBE2BP63146 152 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 WDR38Q5JTN6 314 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 FAM222AQ5U5X8 452 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 SLC48A1Q6P1K1 146 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 FP248Q71RG6 208 aaPredicted RBP3.97□□□□□ -1.77
UBE4A-203ENST00000545354 FOXQ1Q9C009 403 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 ARID2Q68CP9 1835 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 RBMY1BA6NDE4 496 aaKnown RBP3.97□□□□□ -1.77
UBE4A-203ENST00000545354 RBMY1EA6NEQ0 496 aaKnown RBP3.97□□□□□ -1.77
UBE4A-203ENST00000545354 RBMY1DP0C7P1 496 aaKnown RBP3.97□□□□□ -1.77
UBE4A-203ENST00000545354 RBMY1A1P0DJD3 496 aaKnown RBP3.97□□□□□ -1.77
UBE4A-203ENST00000545354 RBMY1CP0DJD4 496 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 RNASE2P10153 161 aaKnown RBP3.97□□□□□ -1.77
UBE4A-203ENST00000545354 PI3P19957 117 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 NANOS3P60323 173 aaKnown RBP3.97□□□□□ -1.77
UBE4A-203ENST00000545354 RBMY1FQ15415 496 aaKnown RBP3.97□□□□□ -1.77
UBE4A-203ENST00000545354 TMEM30BQ3MIR4 351 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 VN1R4Q7Z5H5 301 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 PRSS3P2Q8NHM4 247 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 DYNLRB2Q8TF09 96 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 SLC50A1Q9BRV3 221 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 CFAP54Q96N23 3096 aa3.97□□□□□ -1.77
UBE4A-203ENST00000545354 TMSB15BA0A087X1C1 80 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.96□□□□□ -1.78
UBE4A-203ENST00000545354 SRRM4A7MD48 611 aaKnown RBP3.96□□□□□ -1.78
UBE4A-203ENST00000545354 TMEM14DPA8MWL7 114 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 M0R378 163 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 CCKP06307 115 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 INAFM2P0DMQ5 153 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 PLNP26678 52 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 FCER1GP30273 86 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 CACNG7P62955 275 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 CXCL6P80162 114 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 C2orf82Q6UX34 121 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 CLEC19AQ6UXS0 136 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 C9orf139Q6ZV77 190 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 Q6ZVQ6 151 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 LCA10Q71F78 164 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 DAND5Q8N907 189 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 ZNF503Q96F45 646 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 URB1-AS1Q96HZ7 61 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 TMEM167BQ9NRX6 74 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 DEPPQ9NTK1 212 aa3.96□□□□□ -1.78
UBE4A-203ENST00000545354 CHD9Q3L8U1 2897 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 TRAV41A0A0B4J266 112 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 A0A0G2JNJ9 132 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 SCO2A0A1W2PP80 73 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms