RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 SHANK2-AS3Q9BTD1 123 aa9.67□□□□□ -0.86
LRTOMT-221ENST00000544409 P01737 135 aa9.66□□□□□ -0.86
LRTOMT-221ENST00000544409 HLA-DRB1P01911 266 aa9.66□□□□□ -0.86
LRTOMT-221ENST00000544409 CKS1BP61024 79 aa9.66□□□□□ -0.86
LRTOMT-221ENST00000544409 HSD52Q0P140 79 aa9.66□□□□□ -0.86
LRTOMT-221ENST00000544409 CT83Q5H943 113 aa9.66□□□□□ -0.86
LRTOMT-221ENST00000544409 PET117Q6UWS5 81 aa9.66□□□□□ -0.86
LRTOMT-221ENST00000544409 IGFBPL1Q8WX77 278 aa9.66□□□□□ -0.86
LRTOMT-221ENST00000544409 TMEM190Q8WZ59 177 aa9.66□□□□□ -0.86
LRTOMT-221ENST00000544409 DAZAP1Q96EP5 407 aaKnown RBP9.66□□□□□ -0.86
LRTOMT-221ENST00000544409 A8MWL6 223 aa9.66□□□□□ -0.86
LRTOMT-221ENST00000544409 H3BRN7 92 aa9.66□□□□□ -0.86
LRTOMT-221ENST00000544409 C1orf122Q6ZSJ8 110 aa9.66□□□□□ -0.86
LRTOMT-221ENST00000544409 DTX2Q86UW9 622 aa9.66□□□□□ -0.86
LRTOMT-221ENST00000544409 MAP1LC3CQ9BXW4 147 aa9.66□□□□□ -0.86
LRTOMT-221ENST00000544409 H3BRM9 83 aa9.65□□□□□ -0.86
LRTOMT-221ENST00000544409 KIR3DS1Q14943 382 aa9.65□□□□□ -0.86
LRTOMT-221ENST00000544409 VMO1Q7Z5L0 202 aa9.65□□□□□ -0.86
LRTOMT-221ENST00000544409 Q86TA4 180 aa9.65□□□□□ -0.86
LRTOMT-221ENST00000544409 PRSS22Q9GZN4 317 aa9.65□□□□□ -0.86
LRTOMT-221ENST00000544409 TSSC4Q9Y5U2 329 aaPredicted RBP9.65□□□□□ -0.86
LRTOMT-221ENST00000544409 C19orf71A6NCJ1 209 aa9.65□□□□□ -0.86
LRTOMT-221ENST00000544409 LINC00322Q6ZN03 302 aaPredicted RBP9.65□□□□□ -0.86
LRTOMT-221ENST00000544409 EXOC3-AS1Q8N2X6 119 aa9.65□□□□□ -0.86
LRTOMT-221ENST00000544409 RNF125Q96EQ8 232 aa9.65□□□□□ -0.86
LRTOMT-221ENST00000544409 NPIPB5A8MRT5 1133 aa9.65□□□□□ -0.87
LRTOMT-221ENST00000544409 OOSP1A8MZH6 123 aa9.65□□□□□ -0.87
LRTOMT-221ENST00000544409 COX8AP10176 69 aa9.65□□□□□ -0.87
LRTOMT-221ENST00000544409 ZNF491Q8N8L2 437 aa9.65□□□□□ -0.87
LRTOMT-221ENST00000544409 A6NDN8 102 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 IL4P05112 153 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 KLF17Q5JT82 389 aaPredicted RBP9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 ZNF562Q6V9R5 426 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 GOLT1AQ6ZVE7 132 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 ARPC1AQ92747 370 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 RABAC1Q9UI14 185 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 ABCA1O95477 2261 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 IGF2RP11717 2491 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 TRBV19A0A075B6N1 114 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 A0A1B0GXF2 115 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 NCBP2LA6PVI3 153 aaKnown RBP9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 VWC2LB2RUY7 222 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 OR2J3O76001 311 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 SCGB1A1P11684 91 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 MFAP4P55083 255 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 MINOS1Q5TGZ0 78 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 MS4A6AQ9H2W1 248 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 SOX21Q9Y651 276 aaPredicted RBP9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 MINOS1-NBL1R4GNA1 71 aa9.64□□□□□ -0.87
LRTOMT-221ENST00000544409 GAGE12HA6NDE8 117 aa9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 HBBP68871 147 aa9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 PRNTQ86SH4 94 aa9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 GFRA4Q9GZZ7 299 aa9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 IGLV11-55A0A075B6I3 123 aa9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 TRAV8-1A0A0A6YYK1 113 aa9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 TRBV6-1A0A0K0K1D8 114 aa9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 WI2-2373I1.2A0A1W2PRP0 233 aa9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 HOXB4P17483 251 aaPredicted RBP9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 LYPD1Q8N2G4 141 aa9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 CSN3P07498 182 aa9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 SMIM17P0DL12 118 aa9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 FCGR2BP31994 310 aaPredicted RBP9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 DYNAPQ8N1N2 210 aa9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 FANCD2OSQ96PS1 177 aa9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 C1RLQ9NZP8 487 aa9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 S4R3C0 116 aa9.63□□□□□ -0.87
LRTOMT-221ENST00000544409 A0A1W2PPM0 123 aa9.62□□□□□ -0.87
LRTOMT-221ENST00000544409 K7EQM0 130 aa9.62□□□□□ -0.87
LRTOMT-221ENST00000544409 COL8A1P27658 744 aa9.62□□□□□ -0.87
LRTOMT-221ENST00000544409 CIARTQ8N365 385 aaPredicted RBP9.62□□□□□ -0.87
LRTOMT-221ENST00000544409 TTC9CQ8N5M4 171 aa9.62□□□□□ -0.87
LRTOMT-221ENST00000544409 PGLYRP4Q96LB8 373 aa9.62□□□□□ -0.87
LRTOMT-221ENST00000544409 ZNF48Q96MX3 618 aaPredicted RBP9.62□□□□□ -0.87
LRTOMT-221ENST00000544409 IGLV2-11P01706 119 aa9.62□□□□□ -0.87
LRTOMT-221ENST00000544409 ZFP36P26651 326 aaKnown RBP9.62□□□□□ -0.87
LRTOMT-221ENST00000544409 CD300EQ496F6 205 aaPredicted RBP9.62□□□□□ -0.87
LRTOMT-221ENST00000544409 RBPMS2Q6ZRY4 209 aaKnown RBP9.62□□□□□ -0.87
LRTOMT-221ENST00000544409 Q8N6K4 173 aa9.62□□□□□ -0.87
LRTOMT-221ENST00000544409 TMEM75Q8N9X5 138 aa9.62□□□□□ -0.87
LRTOMT-221ENST00000544409 GTSF1Q8WW33 167 aa9.62□□□□□ -0.87
LRTOMT-221ENST00000544409 NPIPB6E9PJ23 425 aa9.61□□□□□ -0.87
LRTOMT-221ENST00000544409 EBI3Q14213 229 aa9.61□□□□□ -0.87
LRTOMT-221ENST00000544409 TM4SF20Q53R12 229 aa9.61□□□□□ -0.87
LRTOMT-221ENST00000544409 SIGLEC15Q6ZMC9 328 aa9.61□□□□□ -0.87
LRTOMT-221ENST00000544409 C17orf77Q96MU5 243 aa9.61□□□□□ -0.87
LRTOMT-221ENST00000544409 NDPQ00604 133 aa9.61□□□□□ -0.87
LRTOMT-221ENST00000544409 OR5A1Q8NGJ0 315 aa9.61□□□□□ -0.87
LRTOMT-221ENST00000544409 A0A1W2PPR1 153 aa9.61□□□□□ -0.87
LRTOMT-221ENST00000544409 MRPS12O15235 138 aaKnown RBP9.61□□□□□ -0.87
LRTOMT-221ENST00000544409 FABP2P12104 132 aa9.61□□□□□ -0.87
LRTOMT-221ENST00000544409 CFAP161Q6P656 301 aa9.61□□□□□ -0.87
LRTOMT-221ENST00000544409 ZNF414Q96IQ9 312 aa9.61□□□□□ -0.87
LRTOMT-221ENST00000544409 SIRPDQ9H106 197 aa9.61□□□□□ -0.87
LRTOMT-221ENST00000544409 UBTD1Q9HAC8 227 aa9.61□□□□□ -0.87
LRTOMT-221ENST00000544409 C21orf62Q9NYP8 219 aa9.61□□□□□ -0.87
LRTOMT-221ENST00000544409 NBASA2RRP1 2371 aa9.6□□□□□ -0.87
LRTOMT-221ENST00000544409 CHCHD1Q96BP2 118 aaKnown RBP9.6□□□□□ -0.87
LRTOMT-221ENST00000544409 NDUFS7O75251 213 aa9.6□□□□□ -0.87
LRTOMT-221ENST00000544409 SCGB2A1O75556 95 aa9.6□□□□□ -0.87
LRTOMT-221ENST00000544409 NCR2O95944 276 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms