RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 VAMP2P63027 116 aa19.12■□□□□ 0.65
PDCD2-211ENST00000544336 MITD1Q8WV92 249 aa19.12■□□□□ 0.65
PDCD2-211ENST00000544336 SDHCQ99643 169 aaPredicted RBP19.12■□□□□ 0.65
PDCD2-211ENST00000544336 GGACTQ9BVM4 153 aa19.12■□□□□ 0.65
PDCD2-211ENST00000544336 Q9H8V8 135 aa19.12■□□□□ 0.65
PDCD2-211ENST00000544336 H3BQ15 152 aa19.11■□□□□ 0.65
PDCD2-211ENST00000544336 LSM5Q9Y4Y9 91 aaKnown RBP19.11■□□□□ 0.65
PDCD2-211ENST00000544336 PXMP4Q9Y6I8 212 aa19.11■□□□□ 0.65
PDCD2-211ENST00000544336 TRAV5A0A0B4J249 113 aa19.1■□□□□ 0.65
PDCD2-211ENST00000544336 SNURFLB1AK76 121 aa19.1■□□□□ 0.65
PDCD2-211ENST00000544336 ZNF701M0R085 212 aaPredicted RBP19.1■□□□□ 0.65
PDCD2-211ENST00000544336 RLN2P04090 185 aa19.1■□□□□ 0.65
PDCD2-211ENST00000544336 IGLC2P0DOY2 106 aa19.1■□□□□ 0.65
PDCD2-211ENST00000544336 HOXA5P20719 270 aa19.1■□□□□ 0.65
PDCD2-211ENST00000544336 BCAP31P51572 246 aa19.1■□□□□ 0.65
PDCD2-211ENST00000544336 LINC00612Q8N6U2 182 aa19.1■□□□□ 0.65
PDCD2-211ENST00000544336 TRAV12-3A0A0B4J271 114 aa19.09■□□□□ 0.65
PDCD2-211ENST00000544336 M6PRP20645 277 aa19.09■□□□□ 0.65
PDCD2-211ENST00000544336 CAMLGP49069 296 aa19.09■□□□□ 0.65
PDCD2-211ENST00000544336 MIC13Q5XKP0 118 aa19.09■□□□□ 0.65
PDCD2-211ENST00000544336 RXFP4Q8TDU9 374 aa19.09■□□□□ 0.65
PDCD2-211ENST00000544336 FAM25EA8MYX2 175 aa19.08■□□□□ 0.64
PDCD2-211ENST00000544336 CDK2AP2O75956 126 aa19.08■□□□□ 0.64
PDCD2-211ENST00000544336 CT45A10P0DMU9 189 aa19.08■□□□□ 0.64
PDCD2-211ENST00000544336 ZNF846Q147U1 533 aa19.08■□□□□ 0.64
PDCD2-211ENST00000544336 NRARPQ7Z6K4 114 aa19.08■□□□□ 0.64
PDCD2-211ENST00000544336 MAPKAPK5-AS1Q8N8E1 139 aa19.08■□□□□ 0.64
PDCD2-211ENST00000544336 SAT2Q96F10 170 aaPredicted RBP19.08■□□□□ 0.64
PDCD2-211ENST00000544336 KRTAP1-5Q9BYS1 174 aa19.08■□□□□ 0.64
PDCD2-211ENST00000544336 DNAJC4Q9NNZ3 241 aa19.08■□□□□ 0.64
PDCD2-211ENST00000544336 CST7O76096 145 aa19.07■□□□□ 0.64
PDCD2-211ENST00000544336 LEPP41159 167 aa19.07■□□□□ 0.64
PDCD2-211ENST00000544336 Q6ZRG5 221 aa19.07■□□□□ 0.64
PDCD2-211ENST00000544336 C20orf85Q9H1P6 137 aa19.07■□□□□ 0.64
PDCD2-211ENST00000544336 LRP1BQ9NZR2 4599 aa19.07■□□□□ 0.64
PDCD2-211ENST00000544336 IL7P13232 177 aa19.06■□□□□ 0.64
PDCD2-211ENST00000544336 CAV2P51636 162 aa19.06■□□□□ 0.64
PDCD2-211ENST00000544336 RAB31Q13636 194 aa19.06■□□□□ 0.64
PDCD2-211ENST00000544336 ESRGQ1W209 222 aa19.05■□□□□ 0.64
PDCD2-211ENST00000544336 SPATA12Q7Z6I5 190 aa19.05■□□□□ 0.64
PDCD2-211ENST00000544336 TMPRSS5Q9H3S3 457 aa19.05■□□□□ 0.64
PDCD2-211ENST00000544336 FAM24AA6NFZ4 105 aa19.04■□□□□ 0.64
PDCD2-211ENST00000544336 NPIPB6E9PJ23 425 aa19.04■□□□□ 0.64
PDCD2-211ENST00000544336 TTC32Q5I0X7 151 aa19.04■□□□□ 0.64
PDCD2-211ENST00000544336 Q6ZTI0 123 aa19.04■□□□□ 0.64
PDCD2-211ENST00000544336 OR1L4Q8NGR5 311 aa19.04■□□□□ 0.64
PDCD2-211ENST00000544336 ZNF431Q8TF32 576 aaPredicted RBP19.04■□□□□ 0.64
PDCD2-211ENST00000544336 ZNF503Q96F45 646 aa19.04■□□□□ 0.64
PDCD2-211ENST00000544336 ZNF586Q9NXT0 402 aa19.04■□□□□ 0.64
PDCD2-211ENST00000544336 C5orf51A6NDU8 294 aa19.03■□□□□ 0.64
PDCD2-211ENST00000544336 GUK1Q16774 197 aa19.03■□□□□ 0.64
PDCD2-211ENST00000544336 ODF3Q96PU9 254 aa19.03■□□□□ 0.64
PDCD2-211ENST00000544336 UQCC1Q9NVA1 299 aa19.03■□□□□ 0.64
PDCD2-211ENST00000544336 CNPY1Q3B7I2 92 aa19.02■□□□□ 0.64
PDCD2-211ENST00000544336 PYGO2Q9BRQ0 406 aa19.02■□□□□ 0.64
PDCD2-211ENST00000544336 Q9H3A6 140 aa19.02■□□□□ 0.64
PDCD2-211ENST00000544336 WDR83OSQ9Y284 106 aa19.02■□□□□ 0.64
PDCD2-211ENST00000544336 TRAV6A0A075B6T7 132 aa19.01■□□□□ 0.63
PDCD2-211ENST00000544336 UBE2L5PA0A1B0GUS4 154 aa19.01■□□□□ 0.63
PDCD2-211ENST00000544336 ERCC8Q13216 396 aa19.01■□□□□ 0.63
PDCD2-211ENST00000544336 PFDN5Q99471 154 aa19.01■□□□□ 0.63
PDCD2-211ENST00000544336 SEC22CQ9BRL7 303 aa19.01■□□□□ 0.63
PDCD2-211ENST00000544336 M0R3E3 92 aa19■□□□□ 0.63
PDCD2-211ENST00000544336 BAXQ07812 192 aa19■□□□□ 0.63
PDCD2-211ENST00000544336 UPK3BQ9BT76 320 aa19■□□□□ 0.63
PDCD2-211ENST00000544336 MRPS16Q9Y3D3 137 aaKnown RBP19■□□□□ 0.63
PDCD2-211ENST00000544336 PLA2G10O15496 165 aa18.99■□□□□ 0.63
PDCD2-211ENST00000544336 S100A10P60903 97 aa18.99■□□□□ 0.63
PDCD2-211ENST00000544336 C11orf1Q9H5F2 150 aa18.99■□□□□ 0.63
PDCD2-211ENST00000544336 GSN-AS1Q9NRJ2 163 aa18.99■□□□□ 0.63
PDCD2-211ENST00000544336 SLC39A9Q9NUM3 307 aa18.99■□□□□ 0.63
PDCD2-211ENST00000544336 TRGV2A0A075B6R0 118 aa18.98■□□□□ 0.63
PDCD2-211ENST00000544336 C7orf71A4D174 169 aa18.98■□□□□ 0.63
PDCD2-211ENST00000544336 H3BNG1 76 aa18.98■□□□□ 0.63
PDCD2-211ENST00000544336 LYRM1O43325 122 aa18.98■□□□□ 0.63
PDCD2-211ENST00000544336 DAZ2Q13117 558 aaKnown RBP18.98■□□□□ 0.63
PDCD2-211ENST00000544336 TRBV19A0A075B6N1 114 aa18.97■□□□□ 0.63
PDCD2-211ENST00000544336 TCRBP04435 133 aa18.97■□□□□ 0.63
PDCD2-211ENST00000544336 SLC25A5P05141 298 aaKnown RBP18.97■□□□□ 0.63
PDCD2-211ENST00000544336 PVALBP20472 110 aaPredicted RBP18.97■□□□□ 0.63
PDCD2-211ENST00000544336 BTN1A1Q13410 526 aa18.97■□□□□ 0.63
PDCD2-211ENST00000544336 IGSF23A1L1A6 192 aa18.96■□□□□ 0.63
PDCD2-211ENST00000544336 ZNF253O75346 499 aa18.96■□□□□ 0.63
PDCD2-211ENST00000544336 RPL29P47914 159 aaKnown RBP18.96■□□□□ 0.63
PDCD2-211ENST00000544336 KRTAP10-2P60368 255 aa18.96■□□□□ 0.63
PDCD2-211ENST00000544336 CD300CQ08708 224 aa18.96■□□□□ 0.63
PDCD2-211ENST00000544336 VWC2Q2TAL6 325 aa18.96■□□□□ 0.63
PDCD2-211ENST00000544336 C12orf45Q8N5I9 185 aaPredicted RBP18.96■□□□□ 0.63
PDCD2-211ENST00000544336 VSIG2Q96IQ7 327 aa18.96■□□□□ 0.63
PDCD2-211ENST00000544336 C2orf50Q96LR7 162 aa18.96■□□□□ 0.63
PDCD2-211ENST00000544336 TIMM9Q9Y5J7 89 aa18.96■□□□□ 0.63
PDCD2-211ENST00000544336 TRGV1A0A0A0MS02 117 aa18.95■□□□□ 0.62
PDCD2-211ENST00000544336 PYYP10082 97 aa18.95■□□□□ 0.62
PDCD2-211ENST00000544336 FGF7P21781 194 aa18.95■□□□□ 0.62
PDCD2-211ENST00000544336 RNASE4P34096 147 aaKnown RBP18.95■□□□□ 0.62
PDCD2-211ENST00000544336 SULT1A1P50225 295 aa18.95■□□□□ 0.62
PDCD2-211ENST00000544336 C11orf72Q8NBR9 251 aa18.95■□□□□ 0.62
PDCD2-211ENST00000544336 ZNF680Q8NEM1 530 aa18.95■□□□□ 0.62
PDCD2-211ENST00000544336 BLNKQ8WV28 456 aa18.95■□□□□ 0.62
PDCD2-211ENST00000544336 MRPL53Q96EL3 112 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms